Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20nativa_20[genbank_20GCA_5F001447565.1_202015-11-24]
4,443 sequences; 47,933,238 total letters
Query= NC_016448.1
Length=196691
Score E
Sequences producing significant alignments: (Bits) Value
seq501 91.5 2e-13
>seq501
Length=423
Score = 91.5 bits (100), Expect = 2e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 14175 AAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATA 14234
|| |||||||| || || | |||||||||||| ||||||||||||||| || || | |
Sbjct 1 AACCCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAAGGCACCACTACA 60
Query 14235 GCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCT 14294
||| |||| || || || || ||||| || | || | || ||| | |||| | ||
Sbjct 61 GCTGCCCACTTCTGGAAGGTTCCATCCCCTGAAGGCCTGGTGTCTGGCAGCTCCATGTCC 120
Query 14295 TGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACCC 14354
|| | || | || || |||| | ||| || | | || ||||| || || || |||
Sbjct 121 TGGGTGTGGTTTTTCCCATCTCTCTTCCAGGTCAGGGTGATGTCAGCTGGGTAGAAGCCC 180
Query 14355 AAAGCCCAGCACC 14367
| ||||||||||
Sbjct 181 AGGGCCCAGCACC 193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629248251184280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |