Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20nativa_20[genbank_20GCA_5F001447565.1_202015-11-24]
4,443 sequences; 47,933,238 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq3935 297 3e-75
seq252 136 5e-27
seq3469 134 2e-26
seq3275 134 2e-26
seq867 125 9e-24
seq273 107 3e-18
seq316 100 4e-16
>seq3935
Length=392680
Score = 297 bits (328), Expect = 3e-75
Identities = 483/692 (70%), Gaps = 9/692 (1%)
Strand=Plus/Plus
Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358
|||||||| || ||||| || ||||| ||| |||||||| || | || ||| |
Sbjct 361379 GCTATTGGAATTGATTTGGGTACTACGTACAGTTGTGTTGGCGTGTTCCAGCATGGTAAA 361438
Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418
|| || ||||| | || || ||||| || ||||| || ||| || ||||| || ||
Sbjct 361439 GTTGAAATTATTGCCAACGATCAAGGGAATCGTACCACGCCAAGTTATGTTGCTTTCACC 361498
Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478
|||| ||||| | |||||||||| ||||||||||| || |||| ||| |||
Sbjct 361499 GATACCGAACGATTGATTGGAGATGCGGCAAAAAATCAAGTTGCGTTGAATCCTCATAAT 361558
Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538
|| || ||||| |||||||| || || ||||| ||| ||| || ||
Sbjct 361559 ACAGTTTTTGATGCGAAGCGACTCATCGGTCGTCGATTTGATGATGCTGCGGTGCAGTCT 361618
Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGAT--AAGCCTATGATTA 195596
||||| || | ||| | | || || | || || ||| || || | |||
Sbjct 361619 GATATGAAACATTGGCCATTCAAAATTATCAACGATG-----GATCGAAACCAAAAATTC 361673
Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGT 195656
| || |||| | || ||| ||| |||| | || |||||||| |||||||||
Sbjct 361674 AAGTCGAATACAAAGGCGAGTCGAAGTCATTTACACCAGAAGAAATCAGTGCTATGGTGT 361733
Query 195657 TGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTG 195716
| | ||||||||||| ||||| ||| ||| |||| |||||||| || ||||| ||
Sbjct 361734 TAGTGAAGATGAAGGAAACTGCCGAAGCTTATTTGGGAAAAACTGTTAAGGATGCCGTAA 361793
Query 195717 TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTA 195776
| ||||| || || || || | ||||| || || |||||||| || ||||||| | |
Sbjct 361794 TTACTGTTCCGGCATATTTTAACGATTCTCAGCGTCAGGCGACCAAAGACGCTGGAACGA 361853
Query 195777 TTGCGGGTCTAAACTGTCTT-AGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTAT 195835
|| | ||| | || ||| || | || ||||| |||||||||||||||||||||||||||
Sbjct 361854 TTTCTGGTTTGAA-TGTTTTGCGTATCATCAACGAACCAACAGCGGCTGCAATTGCTTAT 361912
Query 195836 GGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|| || || | || | || || |||||| |||| ||||| || |||||||||
Sbjct 361913 GGACTTGATAGAAAGGGTGGCGGTGAACGAAATGTTCTGATATTTGACCTTGGTGGTGGT 361972
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| |||||||| || || | | || |||| ||| || || || || ||| |||| |||
Sbjct 361973 ACTTTTGATGTGTCTATTTTGACCATCGAAGATGGCATTTTTGAGGTCAAGTCTACCGCT 362032
Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
||||| |||||| | |||||||| || |||||
Sbjct 362033 GGTGACACTCATTTGGGTGGTGAGGACTTCGA 362064
>seq252
Length=132080
Score = 136 bits (150), Expect = 5e-27
Identities = 117/145 (81%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||| || ||||||||||| | ||||||||||| ||||| | || || ||| | |
Sbjct 9168 GTATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCAT 9109
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
|||| || || || || | ||| || |||||||||||||||||||||||||| ||||
Sbjct 9108 CAGATACGATTGAAAATGTGAAAAGTAAAATTCAAGATAAGGAAGGCATTCCACCTGATC 9049
Query 171980 AGCAACGACTTATTTTTGCTGGTAA 172004
|||||||| | || |||||||||||
Sbjct 9048 AGCAACGATTGATATTTGCTGGTAA 9024
Score = 129 bits (142), Expect = 8e-25
Identities = 115/144 (80%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920
|||||| || || ||||| || ||||||||||||||||| || || || ||||| | ||
Sbjct 9849 TATGCAGATATTCGTGAAGACACTTACTGGAAAAACTATAACACTAGAAGTTGAACCATC 9790
Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980
|||||| ||||| || | ||| || ||||| ||||||||||||||||| || |||||
Sbjct 9789 AGACACCATCGAAAATGTTAAAAGTAAAATTCAGGATAAGGAAGGCATTCCTCCTGATCA 9730
Query 171981 GCAACGACTTATTTTTGCTGGTAA 172004
|||| || | || ||||| |||||
Sbjct 9729 GCAAAGATTAATCTTTGCAGGTAA 9706
Score = 125 bits (138), Expect = 9e-24
Identities = 113/142 (80%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || ||||||||||| | ||||||||||| ||||| | || || ||| | ||
Sbjct 8879 ATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCATCT 8820
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || || || || | ||| || |||||||||||||||||||||||||| ||||||
Sbjct 8819 GATACGATTGAAAATGTAAAAAGTAAAATTCAAGATAAGGAAGGCATTCCACCTGATCAG 8760
Query 171982 CAACGACTTATTTTTGCTGGTA 172003
|||||| | || ||||||||||
Sbjct 8759 CAACGATTGATATTTGCTGGTA 8738
>seq3469
Length=14404
Score = 134 bits (148), Expect = 2e-26
Identities = 115/142 (81%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || ||||||||||| | || |||||||| || || || || |||||| |||||
Sbjct 7325 ATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTCA 7266
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| ||||| || || | ||| |||||||||||| || |||||||| ||||| |||||
Sbjct 7265 GATACAATTGAAAATGTAAAAAGCAAGATTCAAGACAAAGAAGGCATCCCACCAGATCAA 7206
Query 171982 CAACGACTTATTTTTGCTGGTA 172003
|| || ||||||||||||||||
Sbjct 7205 CAGCGGCTTATTTTTGCTGGTA 7184
Score = 118 bits (130), Expect = 1e-21
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||| ||||| || || ||||| || ||||| |||||| | || || || | ||
Sbjct 6411 ATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 6352
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| ||||| || || | |||| || || || ||||||||||| |||||||| ||||||
Sbjct 6351 GATACAATAGAGAATGTAAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCAG 6292
Query 171982 CAACGACTTATTTTTGCTGGTAA 172004
||||| | ||||||||||||||
Sbjct 6291 CAACGTTTGATTTTTGCTGGTAA 6269
Score = 113 bits (124), Expect = 6e-20
Identities = 115/150 (77%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||| || || || ||||||||||||||||| || || | || || || | ||
Sbjct 6691 ATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATCT 6632
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| ||||| || || | |||| || || || ||||||||||| |||||||| |||||
Sbjct 6631 GATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 6572
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTT 172011
||||| | |||||||||||| | ||| ||
Sbjct 6571 CAACGTTTGATTTTTGCTGGTGAGCAGTTT 6542
Score = 109 bits (120), Expect = 7e-19
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || ||||| ||||| || || || ||||| || || || || || || | |||
Sbjct 7657 ATGCAGATATTTGTCAAAACTCTGACCGGGAAAACCATTACTCTGGAAGTGGAACCCTCA 7598
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|||||| | || || | || | || ||||| ||||| || || ||||||||||||||
Sbjct 7597 GACACAGTTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCAA 7538
Query 171982 CAACGACTTATTTTTGCTGGTAA 172004
||||| || ||||||||||||||
Sbjct 7537 CAACGTCTGATTTTTGCTGGTAA 7515
Score = 107 bits (118), Expect = 3e-18
Identities = 109/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||| || || || || ||||| || ||||| |||||| | || || || | ||
Sbjct 6128 ATGCAAATTTTCGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATCT 6069
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| ||||| || || | |||| ||| || || ||||| || || |||||||| ||||||
Sbjct 6068 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAAGAGGGAATTCCACCAGATCAG 6009
Query 171982 CAACGACTTATTTTTGCTGGTA 172003
||||| | |||||||||||||
Sbjct 6008 CAACGTTTGATTTTTGCTGGTA 5987
>seq3275
Length=16498
Score = 134 bits (148), Expect = 2e-26
Identities = 115/142 (81%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || ||||||||||| | || |||||||| || || || || |||||| |||||
Sbjct 7127 ATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTCA 7186
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| ||||| || || | ||| |||||||||||| || |||||||| ||||| |||||
Sbjct 7187 GATACAATTGAAAATGTAAAAAGCAAGATTCAAGACAAAGAAGGCATCCCACCAGATCAA 7246
Query 171982 CAACGACTTATTTTTGCTGGTA 172003
|| || ||||||||||||||||
Sbjct 7247 CAGCGGCTTATTTTTGCTGGTA 7268
Score = 118 bits (130), Expect = 1e-21
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || ||||||||||| || ||||| ||||| || || || || || || | ||
Sbjct 6795 ATGCAGATATTTGTGAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCCTCT 6854
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|||||||| || || | || | || ||||| ||||| || || ||||||||||||||
Sbjct 6855 GACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCAA 6914
Query 171982 CAACGACTTATTTTTGCTGGTAA 172004
||||| || ||||||||||||||
Sbjct 6915 CAACGTCTGATTTTTGCTGGTAA 6937
Score = 114 bits (126), Expect = 2e-20
Identities = 111/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||| ||||| || || ||||| || ||||| |||||| | || || || | ||
Sbjct 8041 ATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 8100
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| ||||| || || | |||| || || || ||||||||||| |||||||| |||||
Sbjct 8101 GATACAATAGAGAATGTAAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 8160
Query 171982 CAACGACTTATTTTTGCTGGTAA 172004
||||| | ||||||||||||||
Sbjct 8161 CAACGTTTGATTTTTGCTGGTAA 8183
Score = 113 bits (124), Expect = 6e-20
Identities = 115/150 (77%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||| || || || ||||||||||||||||| || || | || || || | ||
Sbjct 7761 ATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATCT 7820
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| ||||| || || | |||| || || || ||||||||||| |||||||| |||||
Sbjct 7821 GATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 7880
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTT 172011
||||| | |||||||||||| | ||| ||
Sbjct 7881 CAACGTTTGATTTTTGCTGGTGAGCAGTTT 7910
Score = 107 bits (118), Expect = 3e-18
Identities = 109/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||| || || || || ||||| || ||||| |||||| | || || || | ||
Sbjct 8323 ATGCAAATTTTCGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATCT 8382
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| ||||| || || | |||| ||| || || ||||| || || |||||||| ||||||
Sbjct 8383 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAAGAGGGAATTCCACCAGATCAG 8442
Query 171982 CAACGACTTATTTTTGCTGGTA 172003
||||| | |||||||||||||
Sbjct 8443 CAACGTTTGATTTTTGCTGGTA 8464
>seq867
Length=98256
Score = 125 bits (138), Expect = 9e-24
Identities = 319/484 (66%), Gaps = 6/484 (1%)
Strand=Plus/Minus
Query 195333 GTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTA 195392
||||||| || | | |||| |||||| || ||||| | ||||| || || || || |
Sbjct 53865 GTGTTGGGGTTTTCAAGAATGGTCGTGTTGAAATTATTGCTAATGATCAGGGCAATCGAA 53806
Query 195393 CAACTCCATCGTACGTTGCCTTTACA---GATAATGAACGTCTCGTTGGAGATGCCGCAA 195449
|| || ||||| || || ||||| || || ||||| | || || ||||| |
Sbjct 53805 TCACCCCGTCGTATGTAGCTTTTACGCCGGAAGGGGAGCGTCTGATCGGCGACGCCGCGA 53746
Query 195450 AAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTC 195509
|||||||| | | || ||| ||||| || || || || |||||| | | ||||
Sbjct 53745 AAAATCAGTTGACCACCAATCCTGAGAATACGGTATTCGATGCAAAGCGTATGGTCGGTC 53686
Query 195510 GCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTC 195569
| | | |||||||||| | |||| ||| || ||| | | || || |||
Sbjct 53685 GAGAATGGTCGGATAAGAGTCTTCAAGCGGATCGTAAAATGTGGCCATTTGCGGTGGTT- 53627
Query 195570 CCGGTGTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTG 195629
| | || || | || | || || ||||||| |||||| ||
Sbjct 53626 --GAAAAATCGAGCAAACCGAACGTTCAGCTTACTGTTAACGGTGAAAAGAAATTGTTCA 53569
Query 195630 CTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCA 195689
|||||||||||||||| | ||||| ||| | || ||||| || | ||| || |||
Sbjct 53568 CTCCCGAAGAAATTTCAGCGATGGTTTTGTTGAAAATGAAAGAAATTGCCGAGGCTTATT 53509
Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749
|||| ||| |||||| |||| || || || || || ||||| |||| ||| ||||||
Sbjct 53508 TGGGCAAAGAAGTGAAAAATGCCGTCGTCACGGTTCCAGCTTATTTCAACGATGCACAAC 53449
Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATG 195809
| || || || || || || | | | ||||| ||||| || | || |||| ||||| |
Sbjct 53448 GTCAAGCTACCAAAGATGCAGGTACCATTGCTGGTCTTAATGTTGTTCGAATCATCAACG 53389
Query 195810 AACC 195813
||||
Sbjct 53388 AACC 53385
Score = 105 bits (116), Expect = 9e-18
Identities = 327/502 (65%), Gaps = 8/502 (2%)
Strand=Plus/Minus
Query 196373 ATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGT 196432
||||| || || ||||| || || || ||||| || || ||||||| || | || |||
Sbjct 52641 ATCAATCCAGACGAAGCTGTCGCCTACGGTGCTGCGGTCCAGGCTGGCGTTATTTCCGGT 52582
Query 196433 GTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGT 196492
| || ||| | || |||||| |||| | || || || | | ||||
Sbjct 52581 GAAGAAGATACTG--GT----GATCTTGTGCTGTTGGACGTCAATCCGTTGACTTTGGGA 52528
Query 196493 CTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACT 196552
||||||| | || || || ||||| || | ||| ||||| || | |||||
Sbjct 52527 ATTGAAACTGTCGGCGGAGTGATGACGAAGCTGATTCCCAGGAATACGGTAGTGCCGACC 52468
Query 196553 AAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTA 196612
||||| || | || || | |||| ||||| || ||| |||||||||
Sbjct 52467 AAGAAATCCCAGATATTCAGCACCGCTGCCGACAATCAGCCCACAGTTACTATTCAAGTT 52408
Query 196613 TATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGAC 196671
| ||||| ||||| || || | || || || ||||| ||||| | |||||| ||||
Sbjct 52407 TTCGAAGGCGAACGA-CCAATGACCAAAGACAATCATCTTCTTGGGAAATTCGATCTGAC 52349
Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731
|| || || | || || | || || ||||| ||| | ||| |||||||| ||||
Sbjct 52348 CGGCATACCTCCGGCTCCGCGTGGGGTACCACAAATTGAAGTTACATTCGATATCGACGT 52289
Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791
|| || ||| | ||||||| || || ||||| | | | ||||| | |||||
Sbjct 52288 GAACGGCATTTTGCACGTCACCGCCGAAGACAAAGGTACCGGCAACAAGAACAAGATCAC 52229
Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851
||||||||||| | || || || ||| || ||||| || ||| | | |||||
Sbjct 52228 CATTACCAATGATCACAATCGTCTGTCGCCGGAAGATATTGACCGCATGATCAACGATGC 52169
Query 196852 GGAAAAGTACAGGGAAGAAGAC 196873
||||| || |||||| |||
Sbjct 52168 CGAAAAATATGCGGAAGAGGAC 52147
Score = 93.3 bits (102), Expect = 6e-14
Identities = 117/160 (73%), Gaps = 3/160 (2%)
Strand=Plus/Minus
Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATT 195873
||| || ||||||||||| || ||||||||||| || ||| ||| |||||| | ||
Sbjct 53332 AACTGCTGCTGCAATTGCATACGGTCTGGACAAAAAGGAGGGTGAA---AAAAATATTTT 53276
Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933
| | ||||| || ||||| |||||||| || | | || | |||||| |||| |
Sbjct 53275 AGTTTACGATCTTGGAGGTGGAACGTTTGACGTAACTTTGCTTACTATTGACAATGGTGT 53216
Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGT 195973
|||||||| | ||||| ||||||||||||| | |||
Sbjct 53215 TTTCGAAGTGCTGTCTACTAATGGTGATACTCATTTGGGT 53176
>seq273
Length=128786
Score = 107 bits (118), Expect = 3e-18
Identities = 109/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||| ||||| || ||||| ||||| ||||| ||||| | || || || | ||
Sbjct 111492 ATGCAAATTTTTGTTAAGACCCTAACTGGGAAAACCATCACGTTGGAAGTGGAACCATCT 111551
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || | || || | |||| ||||||||||||||||| || ||||| || |||||
Sbjct 111552 GATACTGTTGAGAATGTGAAAGGGAAGATTCAAGATAAGGAGGGAATTCCTCCAGATCAA 111611
Query 171982 CAACGACTTATTTTTGCTGGTA 172003
|| || || |||||||||||||
Sbjct 111612 CAGCGTCTGATTTTTGCTGGTA 111633
>seq316
Length=123628
Score = 100 bits (110), Expect = 4e-16
Identities = 77/90 (86%), Gaps = 1/90 (1%)
Strand=Plus/Minus
Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022
||| |||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct 46636 AGGGATTCCACCTGATCAGCAGCGACTGATTTTTGCTGGAAAACAGCTTGAAGATGGACG 46577
Query 172023 TACCCTCGCTGATTACAACGTTCA-AAAGG 172051
||| | | |||||||| |||| |||||
Sbjct 46576 TACTTTGTCCGATTACAATATTCAGAAAGG 46547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657825863966960
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