Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20nelsoni_20[genbank_20GCA_5F001447455.1_202015-11-24]
2,969 sequences; 47,436,005 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq827 82.4 7e-11
>seq827
Length=57960
Score = 82.4 bits (90), Expect = 7e-11
Identities = 100/134 (75%), Gaps = 2/134 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| ||||| || || |||||| ||||||| | ||||| ||| ||| |
Sbjct 31555 ATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAG-CCATC 31497
Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|| || || || | || ||| |||||| |||||||||||||| || || |||||
Sbjct 31496 AGATACAATTGAAAATGTAAAAAGCAAGATTCAAGACAAAGAAGGCATCCCACCGGATCA 31437
Query 24110 ACAGAGACTGATTT 24123
|||| | || ||||
Sbjct 31436 ACAGCGGCTTATTT 31423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429920442900195
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |