Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20nelsoni_20[genbank_20GCA_5F001447455.1_202015-11-24] 2,969 sequences; 47,436,005 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2680 120 3e-22 seq11 105 6e-18 seq827 104 2e-17 seq1187 102 7e-17 seq378 100 2e-16 seq2465 91.5 1e-13 seq2810 89.7 4e-13 >seq2680 Length=639 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || ||||| || || |||| | || ||||| | | | Sbjct 150 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTGGAGAGCTCA 209 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || ||||| || |||||||||||||| ||||| || || Sbjct 210 GACACCATCGATAATGTGAAGGCTAAAATCCAGGACAAGGAGGGTATCCCACCAGACCAG 269 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| |||||||| || ||| | |||||| ||| ||| | | || |||||| Sbjct 270 CAGAGGCTTATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACCCTGGCAGACTACAAC 329 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || || || ||||||||| | ||||| || Sbjct 330 ATCCAGAAGGAATCCACCCTTCATTTGGT 358 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || ||| | || || || || |||| ||||| ||||| | | | Sbjct 378 ATGCAGATTTTTGTCAAGACTCTTACAGGGAAGACCATCACCCTTGAGGTGGAGAGCTCA 437 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || ||||||||||||||||| |||||||| || || Sbjct 438 GACACCATTGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGGATTCCACCAGACCAG 497 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||||||||| ||| | |||||| || ||| | | || ||||| Sbjct 498 CAGAGGCTTATCTTTGCCGGCAAGCAGCTCGAGGATGGGCGTACCCTGGCAGACTACAAT 557 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 558 ATCCAGAAGGAGTCTACC 575 Score = 109 bits (120), Expect = 5e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| || || || || ||||| ||||| || |||||||| || Sbjct 6 AAGATTCAGGACAAGGAGGGAATCCCCCCGGACCAACAGCGTCTGATCTTTGCCGGAAAG 65 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | |||||| ||||||| | | ||||||||||| || || ||||||||| | ||| Sbjct 66 CAGCTTGAGGATGGCCGCACCCTGGCAGATTACAACATCCAGAAGGAATCCACCCTTCAT 125 Query 22423 TTAGT 22427 || || Sbjct 126 TTGGT 130 >seq11 Length=460 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| ||| | ||||| |||||| |||| | ||||| ||| | | Sbjct 60 ATGCAAATTTTCGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 119 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || ||||| || |||||||| |||||| Sbjct 120 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 179 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 |||||| | |||||||| || || Sbjct 180 CAACGTTTGATATTTGCTGGTAA 202 >seq827 Length=57960 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || |||| || || || |||| | ||||||||| | | Sbjct 29768 ATGCAAATTTTTGTTAAGACCCTAACTGGGAAGACCATCACGTTGGAAGTGGAACCATCT 29709 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| || || || | ||| || |||||||| |||||||| ||||| || |||||| Sbjct 29708 GATACTGTTGAGAATGTGAAAGGGAAGATTCAAGATAAGGAGGGAATTCCTCCAGATCAA 29649 Query 22339 CAACGTCTTATATTTGCCGG 22358 || ||||| || ||||| || Sbjct 29648 CAGCGTCTGATTTTTGCTGG 29629 Score = 100 bits (110), Expect = 2e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| ||| | || || ||||| | ||| | ||||| ||| | Sbjct 30637 ATGCAAATTTTCGTTAAGACTCTTACTGGAAAAACAATAACTTTGGAAGTAGAACTATCT 30578 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||||| || ||||| |||||||| |||||| Sbjct 30577 GATACAATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCGGATCAA 30518 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTA 22368 |||||| | || ||||| || || ||| || Sbjct 30517 CAACGTTTGATTTTTGCTGGTAAGCAGATA 30488 Score = 100 bits (110), Expect = 2e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | || || ||||| | ||| | ||||| ||| | | Sbjct 30919 ATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATCT 30860 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||||| || ||||| |||||||| |||||| Sbjct 30859 GATACAATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCGGATCAA 30800 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTA 22368 |||||| | || ||||| || || ||| || Sbjct 30799 CAACGTTTGATTTTTGCTGGTAAGCAGATA 30770 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| ||| | || || ||||| | ||| | ||||| ||| | Sbjct 30355 ATGCAAATTTTCGTTAAGACTCTTACTGGAAAAACAATAACTTTGGAAGTAGAACTATCT 30296 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||||| || ||||| |||||||| |||||| Sbjct 30295 GATACAATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCGGATCAA 30236 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 |||||| | || ||||| || || Sbjct 30235 CAACGTTTGATTTTTGCTGGTAA 30213 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| |||||| | || || ||||| | ||||| ||||||||| || Sbjct 31890 AAAATGCAGATATTTGTGAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCC 31831 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 || | | || || | ||| |||||||| || || ||||| |||||||||||| Sbjct 31830 TTAGACTCAATTGAAAATGTGAAAGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGAT 31771 Query 22336 CAACAACGTCTTATATTTGCCGGCAA 22361 ||||| ||||| || ||||| || || Sbjct 31770 CAACAGCGTCTGATTTTTGCTGGTAA 31745 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| ||||| || || || |||||| | || |||||||| || | | Sbjct 31556 GATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCATC 31497 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | || || | ||| || ||||||||||| || || || ||||| ||||| Sbjct 31496 AGATACAATTGAAAATGTAAAAAGCAAGATTCAAGACAAAGAAGGCATCCCACCGGATCA 31437 Query 22338 ACAACGTCTTATATTTGCCGG 22358 ||| || ||||| ||||| || Sbjct 31436 ACAGCGGCTTATTTTTGCTGG 31416 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || | || || ||||| |||| | ||||||||| | | Sbjct 55631 ATGCAAATTTTTGTTAAGACCCTCACTGGCAAAACCATCACATTGGAAGTGGAACCATCT 55572 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || || || || |||||||| ||||| Sbjct 55571 GATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAAGAAGGAATTCCACCAGATCAG 55512 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||| | |||||||| || Sbjct 55511 CAACGTTTGATATTTGCTGG 55492 >seq1187 Length=25466 Score = 102 bits (112), Expect = 7e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| |||||| | || || ||||| | || || |||||||| || Sbjct 20234 AAAATGCAGATATTTGTCAAAACTCTGACTGGGAAAACCATTACACTGGAAGTGGAGCCC 20293 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | || || | || |||||||| || || ||||| |||||||||||| Sbjct 20294 TCAGACACCATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGAT 20353 Query 22336 CAACAACGTCTTATATTTGCCGGCAA 22361 ||||||||||| || ||||| || || Sbjct 20354 CAACAACGTCTGATTTTTGCTGGTAA 20379 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || | || || ||||| |||| | ||||||||| | | Sbjct 21700 ATGCAAATTTTTGTTAAGACCCTCACTGGCAAAACCATCACATTGGAAGTGGAACCATCT 21759 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || ||||| || |||||||| |||||| Sbjct 21760 GATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 21819 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||| | || ||||| || Sbjct 21820 CAACGTTTGATTTTTGCTGG 21839 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| ||||| || || || |||||| | || |||||||| || | | Sbjct 20568 GATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTC 20627 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | || || | ||| || ||||||||||| || || || ||||| ||||| Sbjct 20628 AGATACAATTGAAAATGTAAAAAGCAAGATTCAAGACAAAGAAGGCATCCCACCGGATCA 20687 Query 22338 ACAACGTCTTATATTTGCCGG 22358 ||| || ||||| ||||| || Sbjct 20688 ACAGCGGCTTATTTTTGCTGG 20708 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || | || || ||||| |||| | ||||||||| | | Sbjct 20851 ATGCAAATTTTTGTTAAGACCCTCACTGGCAAAACCATCACATTGGAAGTGGAACCATCT 20910 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || || || || |||||||| ||||| Sbjct 20911 GATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAAGAAGGAATTCCACCAGATCAG 20970 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||||| || ||||| || Sbjct 20971 CAACGTCTGATTTTTGCTGG 20990 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || | || || ||||| |||| | ||||||||| | | Sbjct 21134 ATGCAAATTTTTGTTAAGACCCTCACTGGCAAAACCATCACATTGGAAGTGGAACCATCT 21193 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || || || || |||||||| ||||| Sbjct 21194 GATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAAGAAGGAATTCCACCAGATCAG 21253 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||||| || ||||| || Sbjct 21254 CAACGTCTGATTTTTGCTGG 21273 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || | || || ||||| |||| | ||||||||| | | Sbjct 21417 ATGCAAATTTTTGTTAAGACCCTCACTGGCAAAACCATCACATTGGAAGTGGAACCATCT 21476 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || || || || |||||||| ||||| Sbjct 21477 GATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAAGAAGGAATTCCACCAGATCAG 21536 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||||| || ||||| || Sbjct 21537 CAACGTCTGATTTTTGCTGG 21556 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || | || || ||||| |||| | ||||||||| | | Sbjct 22268 ATGCAAATTTTTGTTAAGACCCTCACTGGCAAAACCATCACATTGGAAGTGGAACCATCT 22327 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || || || || |||||||| ||||| Sbjct 22328 GATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAAGAAGGAATTCCACCAGATCAG 22387 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||| | |||||||| || Sbjct 22388 CAACGTTTGATATTTGCTGG 22407 Score = 86.0 bits (94), Expect = 5e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| ||| | || || ||||| | || | ||||| ||| | | Sbjct 21985 ATGCAAATTTTCGTTAAGACTCTTACTGGAAAAACAATAACATTGGAAGTAGAACCATCT 22044 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || ||||| || |||||||| ||||| Sbjct 22045 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCAGATCAG 22104 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||||| || ||||| || Sbjct 22105 CAACGTCTGATTTTTGCTGG 22124 >seq378 Length=398 Score = 100 bits (110), Expect = 2e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| ||| | ||||| |||||| |||| | ||||| ||| | | Sbjct 115 ATGCAAATTTTCGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 174 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || ||||| || |||||||| ||||| Sbjct 175 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCAGATCAG 234 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||| | |||||||| || Sbjct 235 CAACGTTTGATATTTGCTGG 254 >seq2465 Length=325902 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| ||||| || ||||| |||| | ||||| || | | Sbjct 17342 ATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCATCT 17283 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||||| ||||| || ||||| || ||||| Sbjct 17282 GATACGATTGAAAATGTGAAAAGTAAAATTCAAGATAAGGAAGGCATTCCGCCTGATCAG 17223 Query 22339 CAACGTCTTATATTTGCCGG 22358 ||||| | |||||||| || Sbjct 17222 CAACGATTGATATTTGCTGG 17203 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| ||||| || ||||| |||| | || || || | | Sbjct 17056 ATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAGGTAGAGCCTTCG 16997 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| |||||||||||||| || || |||||||| ||||| Sbjct 16996 GACACGATTGAAAATGTGAAAAGCAAAATTCAAGACAAAGAAGGCATTCCACCTGATCAG 16937 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 || || | |||||||| || || Sbjct 16936 CAGCGATTGATATTTGCTGGTAA 16914 >seq2810 Length=199988 Score = 89.7 bits (98), Expect = 4e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 129977 ATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAAT 130036 ||||| | || ||||||| ||| ||| || ||||| | || ||||| || | || Sbjct 183525 ATTCATGAGGGCACATCAGTGACCAATCTCCGTCGGCTTCAATGCGCTTCATGAATAGAT 183584 Query 130037 CGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTAC 130096 | |||| ||| |||||||| ||||||||||| ||| | || ||| | || |||| Sbjct 183585 CAGGTATCCAGAGGGCGTAAAACAAATCTCGGGCTCGGTTTTCTTCGACGCCTGTGTTCT 183644 Query 130097 GTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATA 130145 |||| ||||| ||||| | ||||| |||||||| ||||| | ||| Sbjct 183645 TTTTCGCGTCAAGAAAATCAAATATGTCTGCGTGCCAAGGTTCCAAATA 183693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419712812273485