Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20nelsoni_20[genbank_20GCA_5F001447455.1_202015-11-24]
2,969 sequences; 47,436,005 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq827 131 1e-25
seq11 127 2e-24
seq2465 125 6e-24
seq1187 122 7e-23
seq378 116 3e-21
seq2680 100 2e-16
seq1696 100 2e-16
>seq827
Length=57960
Score = 131 bits (144), Expect = 1e-25
Identities = 117/147 (80%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382
|| |||||| ||||| |||| ||||||||||||||| ||||| || |||||||| |||||
Sbjct 31741 TTACTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAAT 31800
Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442
||| ||| ||| |||| | | ||| | | ||||||||| ||||| | ||||| ||
Sbjct 31801 TTTACCTTTCACATTTTCAATTGAGTCTAAGGGTTCCACTTCCAGAGTAATGGTTTTCCC 31860
Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | |||||| ||||||||||||||
Sbjct 31861 AGTCAGAGTTTTCACAAATATCTGCAT 31887
Score = 118 bits (130), Expect = 8e-22
Identities = 113/145 (78%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384
|| |||| ||||| || | ||||||||||| || || ||||||||||| |||||||| |
Sbjct 31411 GCATACCAGCAAAAATAAGCCGCTGTTGATCCGGTGGGATGCCTTCTTTGTCTTGAATCT 31470
Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444
| ||||||| |||| | || || || | || |||||||| || | |||||| || |
Sbjct 31471 TGCTTTTTACATTTTCAATTGTATCTGATGGCTCAACTTCAAGTGTAATCGTTTTTCCTG 31530
Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469
| || ||||| ||||||||||||||
Sbjct 31531 TCAACGTTTTCACAAATATCTGCAT 31555
Score = 114 bits (126), Expect = 1e-20
Identities = 113/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 101324 TGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATT 101383
|||||||| ||||| |||||||| |||||||| || ||||| || |||||||||||||||
Sbjct 30492 TGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATT 30551
Query 101384 TTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCG 101443
|| ||| ||| |||||| || ||||| ||| ||||| | ||| | ||||| ||
Sbjct 30552 TTGCCTTTCACATTTTCTATTGTATCAGATAGTTCTACTTCCAAAGTTATTGTTTTTCCA 30611
Query 101444 GTTAAAGTTTTTACAAATATCTGCAT 101469
|| | ||| || || || || |||||
Sbjct 30612 GTAAGAGTCTTAACGAAAATTTGCAT 30637
Score = 114 bits (126), Expect = 1e-20
Identities = 113/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 101324 TGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATT 101383
|||||||| ||||| |||||||| |||||||| || ||||| || |||||||||||||||
Sbjct 30774 TGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATT 30833
Query 101384 TTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCG 101443
|| ||| ||| |||||| || ||||| | ||| ||||| | ||| | ||||| ||
Sbjct 30834 TTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCCA 30893
Query 101444 GTTAAAGTTTTTACAAATATCTGCAT 101469
|| | || || || || || |||||
Sbjct 30894 GTAAGGGTCTTAACGAAAATTTGCAT 30919
Score = 113 bits (124), Expect = 4e-20
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| |||||||||||||| || ||||| || ||||| ||||||||||| || |||||
Sbjct 55490 TACCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCCTGTATTTTCC 55549
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| ||| |||| | || ||||| | ||||||||| | |||| |||||||| || |
Sbjct 55550 CTTTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAATGTGATGGTTTTGCCAGTGA 55609
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
|| || ||||| || |||||
Sbjct 55610 GGGTCTTAACAAAAATTTGCAT 55631
Score = 111 bits (122), Expect = 1e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
|||||| ||||| |||||||| |||||||| || ||||| || |||||||||||||||||
Sbjct 30212 CTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTT 30271
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
||| ||| |||||| || ||||| ||| ||||| | ||| | ||||| || ||
Sbjct 30272 GCCTTTCACATTTTCTATTGTATCAGATAGTTCTACTTCCAAAGTTATTGTTTTTCCAGT 30331
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
| ||| || || || || |||||
Sbjct 30332 AAGAGTCTTAACGAAAATTTGCAT 30355
Score = 107 bits (118), Expect = 2e-18
Identities = 109/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||| |||| |||||||||||| || ||||| || || ||||||||||| ||
Sbjct 29627 TACCAGCAAAAATCAGACGCTGTTGATCTGGAGGAATTCCCTCCTTATCTTGAATCTTCC 29686
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| ||| | || ||||| ||||| | ||||||||| | |||| || || || ||||
Sbjct 29687 CTTTCACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTCTTCCCAGTTA 29746
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
|| || ||||| || |||||
Sbjct 29747 GGGTCTTAACAAAAATTTGCAT 29768
>seq11
Length=460
Score = 127 bits (140), Expect = 2e-24
Identities = 118/150 (79%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
|||| |||||| |||||||||||||| |||||||| || ||||| ||||| ||||| ||
Sbjct 209 CAATGACTTACCAGCAAATATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTG 150
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
||||| ||||||| | |||| || ||||| | ||| ||||| | |||| ||||||
Sbjct 149 TATTTTGCCTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTT 90
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||||| | ||| || || || || |||||
Sbjct 89 GCCGGTAAGAGTCTTAACGAAAATTTGCAT 60
Score = 82.4 bits (90), Expect = 6e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 101357 GGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTT 101416
|| ||||| ||||| ||||| || ||||| ||||||| | |||| || ||||| | |
Sbjct 460 GGTGGAATTCCTTCCTTATCCTGTATTTTGCCTTTTACATTCTCTATTGTATCAGATGGT 401
Query 101417 TCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| ||||| | |||| |||||||||||| | ||| || || || || |||||
Sbjct 400 TCTACTTCCAAGGTGATCGTTTTGCCGGTAAGAGTCTTAACGAAAATTTGCAT 348
>seq2465
Length=325902
Score = 125 bits (138), Expect = 6e-24
Identities = 113/142 (80%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||||||||| || || ||||| |||||||||||||| ||||||||||||||
Sbjct 17201 TACCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAATTTTAC 17260
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| ||| |||| | || ||||| | || ||||| | |||| ||||| || ||||
Sbjct 17261 TTTTCACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTA 17320
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
| ||||| ||||| ||||||||
Sbjct 17321 ATGTTTTCACAAAAATCTGCAT 17342
Score = 123 bits (136), Expect = 2e-23
Identities = 113/143 (79%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| ||||||||||| ||||| ||||| || |||||||||||||| |||||||||||
Sbjct 16914 TTACCAGCAAATATCAATCGCTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGAATTTTG 16973
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| |||| | ||||| || | || || || | |||| ||||| || |||
Sbjct 16974 CTTTTCACATTTTCAATCGTGTCCGAAGGCTCTACCTCCAATGTGATTGTTTTTCCAGTT 17033
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| ||||| ||||| ||||||||
Sbjct 17034 AATGTTTTCACAAAAATCTGCAT 17056
Score = 100 bits (110), Expect = 2e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||||||||| || || | || ||||| || ||||||||||| ||||| ||||||||
Sbjct 17878 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 17937
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| |||| | ||||| || | ||| ||||| || || | ||||| || ||
Sbjct 17938 CTTTTAACATTTTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 17997
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || || |||||||||||
Sbjct 17998 AGTGTCTTCACGAATATCTGCAT 18020
>seq1187
Length=25466
Score = 122 bits (134), Expect = 7e-23
Identities = 115/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382
|| |||||| ||||| |||| ||| ||||||||||| ||||| || |||||||| |||||
Sbjct 20383 TTACTTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAAT 20324
Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442
||| || ||| |||| | ||||| || | |||||||| || || | ||||| ||
Sbjct 20323 TTTACCCTTCACATTTTCAATGGTGTCTGAGGGCTCCACTTCCAGTGTAATGGTTTTCCC 20264
Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | |||||| ||||||||||||||
Sbjct 20263 AGTCAGAGTTTTGACAAATATCTGCAT 20237
Score = 122 bits (134), Expect = 7e-23
Identities = 114/145 (79%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384
|| |||| ||||| || | ||||||||||| || || ||||||||||| |||||||| |
Sbjct 20713 GCATACCAGCAAAAATAAGCCGCTGTTGATCCGGTGGGATGCCTTCTTTGTCTTGAATCT 20654
Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444
| ||||||| |||| | || || |||| || |||||||| || | |||||| || |
Sbjct 20653 TGCTTTTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTG 20594
Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469
| || ||||| ||||||||||||||
Sbjct 20593 TCAACGTTTTCACAAATATCTGCAT 20569
Score = 113 bits (124), Expect = 4e-20
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| |||||||||||||| || ||||| || ||||| ||||||||||| || |||||
Sbjct 22409 TACCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCCTGTATTTTCC 22350
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| ||| |||| | || ||||| | ||||||||| | |||| |||||||| || |
Sbjct 22349 CTTTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAATGTGATGGTTTTGCCAGTGA 22290
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
|| || ||||| || |||||
Sbjct 22289 GGGTCTTAACAAAAATTTGCAT 22268
Score = 104 bits (114), Expect = 2e-17
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||| |||| ||| || ||||| || ||||| ||||||||||| || |||||
Sbjct 20992 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCCTGTATTTTCC 20933
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| ||| |||| | || ||||| | ||||||||| | |||| |||||||| || |
Sbjct 20932 CTTTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAATGTGATGGTTTTGCCAGTGA 20873
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
|| || ||||| || |||||
Sbjct 20872 GGGTCTTAACAAAAATTTGCAT 20851
Score = 104 bits (114), Expect = 2e-17
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||| |||| ||| || ||||| || ||||| ||||||||||| || |||||
Sbjct 21275 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCCTGTATTTTCC 21216
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| ||| |||| | || ||||| | ||||||||| | |||| |||||||| || |
Sbjct 21215 CTTTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAATGTGATGGTTTTGCCAGTGA 21156
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
|| || ||||| || |||||
Sbjct 21155 GGGTCTTAACAAAAATTTGCAT 21134
Score = 104 bits (114), Expect = 2e-17
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||| |||| ||| || ||||| || ||||| ||||||||||| || |||||
Sbjct 21558 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCCTGTATTTTCC 21499
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| ||| |||| | || ||||| | ||||||||| | |||| |||||||| || |
Sbjct 21498 CTTTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAATGTGATGGTTTTGCCAGTGA 21439
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
|| || ||||| || |||||
Sbjct 21438 GGGTCTTAACAAAAATTTGCAT 21417
>seq378
Length=398
Score = 116 bits (128), Expect = 3e-21
Identities = 111/142 (78%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| |||||||||||||| || ||||| || ||||| ||||| ||||| || |||||
Sbjct 256 TACCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTGC 197
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||||||| | |||| || ||||| | ||| ||||| | |||| |||||||||||| |
Sbjct 196 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTAA 137
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
||| || || || || |||||
Sbjct 136 GAGTCTTAACGAAAATTTGCAT 115
>seq2680
Length=639
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||||||||| || || || |||||||| || || | || | |||| || | |||
Sbjct 580 TGAAGGGTAGACTCCTTCTGGATATTGTAGTCTGCCAGGGTACGCCCATCCTCGAGCTGC 521
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| || | | ||| || || || ||||| || || || |||||||| ||
Sbjct 520 TTGCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCTTGAATCTTG 461
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | ||||| || | ||||| ||||| |||| || || || ||
Sbjct 460 GCCTTCACATTGTCAATGGTGTCTGAGCTCTCCACCTCAAGGGTGATGGTCTTCCCTGTA 401
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||| || ||||| ||||||||
Sbjct 400 AGAGTCTTGACAAAAATCTGCAT 378
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||||||||| ||||| || || || ||||| || || | || | | |||| ||
Sbjct 358 ACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTACGGCCATCCTCA 299
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || ||||| || | | ||| || || || || || || || || || ||
Sbjct 298 AGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGG 239
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
||||| || ||| | || | ||||| || | ||||| || | |||| || ||
Sbjct 238 ATTTTAGCCTTCACATTATCGATGGTGTCTGAGCTCTCCACCTCCAAGGTGATGGTCTTT 179
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || || || ||||| ||||||||
Sbjct 178 CCGGTCAAGGTCTTGACAAAGATCTGCAT 150
Score = 86.0 bits (94), Expect = 5e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||||||||| ||||| || || || |||||||| || | || | | |||| ||
Sbjct 130 ACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCATCCTCA 71
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || ||||| |||| ||||||||| || || || || || || || || |||
Sbjct 70 AGCTGCTTTCCGGCAAAGATCAGACGCTGTTGGTCCGGGGGGATTCCCTCCTTGTCCTGA 11
Query 101381 ATTTT 101385
|| ||
Sbjct 10 ATCTT 6
>seq1696
Length=245
Score = 100 bits (110), Expect = 2e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
|||| |||||| ||||| |||||||| |||||||| || ||||| ||||||||||| ||
Sbjct 120 CAATGACTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCTTTATCCTG 61
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
||||| |||||| | |||| || ||||| | ||| ||||| | |||| ||||||
Sbjct 60 TATTTTGCCCTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396264060789933
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