Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20nelsoni_20[genbank_20GCA_5F001447455.1_202015-11-24] 2,969 sequences; 47,436,005 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq827 131 1e-25 seq11 127 2e-24 seq2465 125 6e-24 seq1187 122 7e-23 seq378 116 3e-21 seq2680 100 2e-16 seq1696 100 2e-16 >seq827 Length=57960 Score = 131 bits (144), Expect = 1e-25 Identities = 117/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382 || |||||| ||||| |||| ||||||||||||||| ||||| || |||||||| ||||| Sbjct 31741 TTACTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAAT 31800 Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442 ||| ||| ||| |||| | | ||| | | ||||||||| ||||| | ||||| || Sbjct 31801 TTTACCTTTCACATTTTCAATTGAGTCTAAGGGTTCCACTTCCAGAGTAATGGTTTTCCC 31860 Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||||| |||||||||||||| Sbjct 31861 AGTCAGAGTTTTCACAAATATCTGCAT 31887 Score = 118 bits (130), Expect = 8e-22 Identities = 113/145 (78%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384 || |||| ||||| || | ||||||||||| || || ||||||||||| |||||||| | Sbjct 31411 GCATACCAGCAAAAATAAGCCGCTGTTGATCCGGTGGGATGCCTTCTTTGTCTTGAATCT 31470 Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444 | ||||||| |||| | || || || | || |||||||| || | |||||| || | Sbjct 31471 TGCTTTTTACATTTTCAATTGTATCTGATGGCTCAACTTCAAGTGTAATCGTTTTTCCTG 31530 Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469 | || ||||| |||||||||||||| Sbjct 31531 TCAACGTTTTCACAAATATCTGCAT 31555 Score = 114 bits (126), Expect = 1e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 101324 TGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATT 101383 |||||||| ||||| |||||||| |||||||| || ||||| || ||||||||||||||| Sbjct 30492 TGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATT 30551 Query 101384 TTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCG 101443 || ||| ||| |||||| || ||||| ||| ||||| | ||| | ||||| || Sbjct 30552 TTGCCTTTCACATTTTCTATTGTATCAGATAGTTCTACTTCCAAAGTTATTGTTTTTCCA 30611 Query 101444 GTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| || || || || ||||| Sbjct 30612 GTAAGAGTCTTAACGAAAATTTGCAT 30637 Score = 114 bits (126), Expect = 1e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 101324 TGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATT 101383 |||||||| ||||| |||||||| |||||||| || ||||| || ||||||||||||||| Sbjct 30774 TGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATT 30833 Query 101384 TTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCG 101443 || ||| ||| |||||| || ||||| | ||| ||||| | ||| | ||||| || Sbjct 30834 TTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCCA 30893 Query 101444 GTTAAAGTTTTTACAAATATCTGCAT 101469 || | || || || || || ||||| Sbjct 30894 GTAAGGGTCTTAACGAAAATTTGCAT 30919 Score = 113 bits (124), Expect = 4e-20 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| |||||||||||||| || ||||| || ||||| ||||||||||| || ||||| Sbjct 55490 TACCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCCTGTATTTTCC 55549 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| |||| | || ||||| | ||||||||| | |||| |||||||| || | Sbjct 55550 CTTTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAATGTGATGGTTTTGCCAGTGA 55609 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 || || ||||| || ||||| Sbjct 55610 GGGTCTTAACAAAAATTTGCAT 55631 Score = 111 bits (122), Expect = 1e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 |||||| ||||| |||||||| |||||||| || ||||| || ||||||||||||||||| Sbjct 30212 CTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTT 30271 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| ||| |||||| || ||||| ||| ||||| | ||| | ||||| || || Sbjct 30272 GCCTTTCACATTTTCTATTGTATCAGATAGTTCTACTTCCAAAGTTATTGTTTTTCCAGT 30331 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | ||| || || || || ||||| Sbjct 30332 AAGAGTCTTAACGAAAATTTGCAT 30355 Score = 107 bits (118), Expect = 2e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| |||| |||||||||||| || ||||| || || ||||||||||| || Sbjct 29627 TACCAGCAAAAATCAGACGCTGTTGATCTGGAGGAATTCCCTCCTTATCTTGAATCTTCC 29686 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| | || ||||| ||||| | ||||||||| | |||| || || || |||| Sbjct 29687 CTTTCACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTCTTCCCAGTTA 29746 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 || || ||||| || ||||| Sbjct 29747 GGGTCTTAACAAAAATTTGCAT 29768 >seq11 Length=460 Score = 127 bits (140), Expect = 2e-24 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 |||| |||||| |||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct 209 CAATGACTTACCAGCAAATATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTG 150 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||||| ||||||| | |||| || ||||| | ||| ||||| | |||| |||||| Sbjct 149 TATTTTGCCTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTT 90 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||| | ||| || || || || ||||| Sbjct 89 GCCGGTAAGAGTCTTAACGAAAATTTGCAT 60 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 101357 GGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTT 101416 || ||||| ||||| ||||| || ||||| ||||||| | |||| || ||||| | | Sbjct 460 GGTGGAATTCCTTCCTTATCCTGTATTTTGCCTTTTACATTCTCTATTGTATCAGATGGT 401 Query 101417 TCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||| | |||| |||||||||||| | ||| || || || || ||||| Sbjct 400 TCTACTTCCAAGGTGATCGTTTTGCCGGTAAGAGTCTTAACGAAAATTTGCAT 348 >seq2465 Length=325902 Score = 125 bits (138), Expect = 6e-24 Identities = 113/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||||||||| || || ||||| |||||||||||||| |||||||||||||| Sbjct 17201 TACCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAATTTTAC 17260 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| |||| | || ||||| | || ||||| | |||| ||||| || |||| Sbjct 17261 TTTTCACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTA 17320 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 | ||||| ||||| |||||||| Sbjct 17321 ATGTTTTCACAAAAATCTGCAT 17342 Score = 123 bits (136), Expect = 2e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||||||||| ||||| ||||| || |||||||||||||| ||||||||||| Sbjct 16914 TTACCAGCAAATATCAATCGCTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGAATTTTG 16973 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| |||| | ||||| || | || || || | |||| ||||| || ||| Sbjct 16974 CTTTTCACATTTTCAATCGTGTCCGAAGGCTCTACCTCCAATGTGATTGTTTTTCCAGTT 17033 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || ||||| ||||| |||||||| Sbjct 17034 AATGTTTTCACAAAAATCTGCAT 17056 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||||||||| || || | || ||||| || ||||||||||| ||||| |||||||| Sbjct 17878 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 17937 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| |||| | ||||| || | ||| ||||| || || | ||||| || || Sbjct 17938 CTTTTAACATTTTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 17997 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || ||||||||||| Sbjct 17998 AGTGTCTTCACGAATATCTGCAT 18020 >seq1187 Length=25466 Score = 122 bits (134), Expect = 7e-23 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382 || |||||| ||||| |||| ||| ||||||||||| ||||| || |||||||| ||||| Sbjct 20383 TTACTTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAAT 20324 Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442 ||| || ||| |||| | ||||| || | |||||||| || || | ||||| || Sbjct 20323 TTTACCCTTCACATTTTCAATGGTGTCTGAGGGCTCCACTTCCAGTGTAATGGTTTTCCC 20264 Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||||| |||||||||||||| Sbjct 20263 AGTCAGAGTTTTGACAAATATCTGCAT 20237 Score = 122 bits (134), Expect = 7e-23 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384 || |||| ||||| || | ||||||||||| || || ||||||||||| |||||||| | Sbjct 20713 GCATACCAGCAAAAATAAGCCGCTGTTGATCCGGTGGGATGCCTTCTTTGTCTTGAATCT 20654 Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444 | ||||||| |||| | || || |||| || |||||||| || | |||||| || | Sbjct 20653 TGCTTTTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTG 20594 Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469 | || ||||| |||||||||||||| Sbjct 20593 TCAACGTTTTCACAAATATCTGCAT 20569 Score = 113 bits (124), Expect = 4e-20 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| |||||||||||||| || ||||| || ||||| ||||||||||| || ||||| Sbjct 22409 TACCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCCTGTATTTTCC 22350 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| |||| | || ||||| | ||||||||| | |||| |||||||| || | Sbjct 22349 CTTTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAATGTGATGGTTTTGCCAGTGA 22290 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 || || ||||| || ||||| Sbjct 22289 GGGTCTTAACAAAAATTTGCAT 22268 Score = 104 bits (114), Expect = 2e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| |||| ||| || ||||| || ||||| ||||||||||| || ||||| Sbjct 20992 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCCTGTATTTTCC 20933 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| |||| | || ||||| | ||||||||| | |||| |||||||| || | Sbjct 20932 CTTTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAATGTGATGGTTTTGCCAGTGA 20873 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 || || ||||| || ||||| Sbjct 20872 GGGTCTTAACAAAAATTTGCAT 20851 Score = 104 bits (114), Expect = 2e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| |||| ||| || ||||| || ||||| ||||||||||| || ||||| Sbjct 21275 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCCTGTATTTTCC 21216 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| |||| | || ||||| | ||||||||| | |||| |||||||| || | Sbjct 21215 CTTTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAATGTGATGGTTTTGCCAGTGA 21156 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 || || ||||| || ||||| Sbjct 21155 GGGTCTTAACAAAAATTTGCAT 21134 Score = 104 bits (114), Expect = 2e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| |||| ||| || ||||| || ||||| ||||||||||| || ||||| Sbjct 21558 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCCTGTATTTTCC 21499 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| |||| | || ||||| | ||||||||| | |||| |||||||| || | Sbjct 21498 CTTTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAATGTGATGGTTTTGCCAGTGA 21439 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 || || ||||| || ||||| Sbjct 21438 GGGTCTTAACAAAAATTTGCAT 21417 >seq378 Length=398 Score = 116 bits (128), Expect = 3e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| |||||||||||||| || ||||| || ||||| ||||| ||||| || ||||| Sbjct 256 TACCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTGC 197 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||||||| | |||| || ||||| | ||| ||||| | |||| |||||||||||| | Sbjct 196 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTAA 137 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 ||| || || || || ||||| Sbjct 136 GAGTCTTAACGAAAATTTGCAT 115 >seq2680 Length=639 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||||||||| || || || |||||||| || || | || | |||| || | ||| Sbjct 580 TGAAGGGTAGACTCCTTCTGGATATTGTAGTCTGCCAGGGTACGCCCATCCTCGAGCTGC 521 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | | ||| || || || ||||| || || || |||||||| || Sbjct 520 TTGCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCTTGAATCTTG 461 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| || | ||||| ||||| |||| || || || || Sbjct 460 GCCTTCACATTGTCAATGGTGTCTGAGCTCTCCACCTCAAGGGTGATGGTCTTCCCTGTA 401 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||| || ||||| |||||||| Sbjct 400 AGAGTCTTGACAAAAATCTGCAT 378 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||||||||| ||||| || || || ||||| || || | || | | |||| || Sbjct 358 ACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTACGGCCATCCTCA 299 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| || | | ||| || || || || || || || || || || Sbjct 298 AGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGG 239 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| || ||| | || | ||||| || | ||||| || | |||| || || Sbjct 238 ATTTTAGCCTTCACATTATCGATGGTGTCTGAGCTCTCCACCTCCAAGGTGATGGTCTTT 179 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || || ||||| |||||||| Sbjct 178 CCGGTCAAGGTCTTGACAAAGATCTGCAT 150 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||||||||| ||||| || || || |||||||| || | || | | |||| || Sbjct 130 ACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCATCCTCA 71 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| |||| ||||||||| || || || || || || || || ||| Sbjct 70 AGCTGCTTTCCGGCAAAGATCAGACGCTGTTGGTCCGGGGGGATTCCCTCCTTGTCCTGA 11 Query 101381 ATTTT 101385 || || Sbjct 10 ATCTT 6 >seq1696 Length=245 Score = 100 bits (110), Expect = 2e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 |||| |||||| ||||| |||||||| |||||||| || ||||| ||||||||||| || Sbjct 120 CAATGACTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCTTTATCCTG 61 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||||| |||||| | |||| || ||||| | ||| ||||| | |||| |||||| Sbjct 60 TATTTTGCCCTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396264060789933