Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20nelsoni_20[genbank_20GCA_5F001447455.1_202015-11-24] 2,969 sequences; 47,436,005 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2810 86.0 3e-12 >seq2810 Length=199988 Score = 86.0 bits (94), Expect = 3e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 24665 GTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAAT 24724 || ||||| |||| | ||||| || || ||||| | ||| ||||| |||||||||| Sbjct 182003 GTGAATTGAATAGCCGTCACTGCCGGCTTGGTTCTCAAATAGTACATCCCAGTTTTCAGA 182062 Query 24725 TTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGCA 24766 ||||||||| ||||| |||||||||||||| | ||| ||| Sbjct 182063 CCCTTCTTCCAGCCGTAGAAATGCATTGATGTCAATTTAGCA 182104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253030843826675