Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20nelsoni_20[genbank_20GCA_5F001447455.1_202015-11-24]
2,969 sequences; 47,436,005 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1000 224 1e-53
>seq1000
Length=308
Score = 224 bits (248), Expect = 1e-53
Identities = 167/194 (86%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403
|||||||||||||||||||||||||||||||||| ||||| ||||||| |||| || |
Sbjct 119 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTTAGCTCACTACAACTTCTG 178
Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAA 8463
|||||| ||||||||| |||||||||||||||||||| |||||||||||| |||||||
Sbjct 179 CCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGC 238
Query 8464 AAGCCACCACGCCAAGCTAATTTT--TGTATTTTTAGTAGAGAGAGGGTTTCACCATGTT 8521
||||||| || |||||||| |||||||| ||||||||| |||||||||||||||
Sbjct 239 CCGCCACCATGC----CTAATTTTTCTGTATTTTGAGTAGAGAGGGGGTTTCACCATGTT 294
Query 8522 GGCCAGGCTGGTCT 8535
|||||| || |||
Sbjct 295 AGCCAGGATGTTCT 308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521468646276600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |