Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20papuae_20[genbank_20GCA_5F001447755.1_202015-11-24] 2,542 sequences; 46,844,510 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq285 100 2e-16 >seq285 Length=127634 Score = 100 bits (110), Expect = 2e-16 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 118179 CCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTG 118238 ||||| || ||||| | || | |||||||||||||| || | |||||| ||||||||| Sbjct 100498 CCGTCTCGTCCGGCACGCCCAGTTTCTTGATAATAACCTTCGACTGATTTCGGCATACTG 100439 Query 118239 TGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCG 118296 || || || || || |||||||| || || || |||||||| ||||| || || |||| Sbjct 100438 TGGTGGATGACAAAACGCACGTCCGGCTTGTCTATGCCCATGCCGAAAGCGATGGTCG 100381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381760972440048