Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20papuae_20[genbank_20GCA_5F001447755.1_202015-11-24]
2,542 sequences; 46,844,510 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq684 89.7 1e-12
>seq684
Length=410242
Score = 89.7 bits (98), Expect = 1e-12
Identities = 110/150 (73%), Gaps = 3/150 (2%)
Strand=Plus/Plus
Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545
||| || || || || ||||||||||| || || |||||||||| |||||||| ||
Sbjct 368006 CTTACCAGCAAATATCAGACGCTGCTGATCGGGTGGAATTCCTTCTTTATCCTGAATTTT 368065
Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
|||||| ||| | ||||||| | ||| || |||| || || || || || ||
Sbjct 368066 ACCCTTCACATTTTCAATTGTGTCTGAGGCTTCCACTTCCAGAGTAATGGTTTTCCCAGT 368125
Query 199606 GAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||||||||||||||| || || ||||||
Sbjct 368126 GAGAGTTTTCACAAATATCTG---CATTTT 368152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178883203260314
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |