Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20papuae_20[genbank_20GCA_5F001447755.1_202015-11-24] 2,542 sequences; 46,844,510 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq265 269 2e-66 seq1033 136 3e-26 seq684 118 9e-21 seq285 104 2e-16 seq1852 96.9 3e-14 seq833 96.9 3e-14 seq2020 93.3 3e-13 seq1934 86.0 5e-11 >seq265 Length=128937 Score = 269 bits (298), Expect = 2e-66 Identities = 391/548 (71%), Gaps = 8/548 (1%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || || ||||| || || || || ||||||||||| || | || |||||||| Sbjct 79072 GCTATTGGAATTGATTTGGGTACTACCTACAGTTGTGTTGGCGTGTTCCAGCATGGTAAA 79013 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 |||||||||||||| || |||||||| || | || || ||| ||||||| ||||||| Sbjct 79012 GTTGAAATTATTGCAAACGATCAAGGGAATCGTACCACGCCAAGTTATGTTGCTTTCACC 78953 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || |||| | |||| ||||| ||||| |||| | | |||||| ||| Sbjct 78952 GATACCGAACGACTGATTGGCGATGCGGCAAAGAATCAGGTTGCGTTGAATCCTCATAAT 78893 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || |||||||||| || || | || || | | ||| ||||| | |||| ||| | Sbjct 78892 ACAGTTTTTGATGCGAAGCGACTTATCGGTCGTCGATTTGATGATGCTGCTGTGCAGTCT 78833 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGA---AAACCTTATATTGAA 550288 || ||||| |||||||| || || || | |||| |||| |||||| | ||| || Sbjct 78832 GACATGAAACATTGGCCATTTAAAGTTATCAATG---ATGGAACGAAACCTAAAATTCAA 78776 Query 550289 G-CTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTT 550347 | | | | | |||| || |||| |||| ||| |||| ||||||| || Sbjct 78775 GTCGAAT-ACAAAGGCGAGTCGAAGTCATTTACACCGGAAGAAATCAGCGCTATGGTGTT 78717 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAAT 550407 | |||| ||||| |||| ||| |||| | | || || |||| ||| || ||||| Sbjct 78716 AGTGAAGATGAAGGAAACTGCCGAAGCTTATTTGGGAAAAACTGTTAAGGACGCCGTAAT 78657 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 ||||| || ||||||||||| || || || ||||| || || ||||| |||||| || Sbjct 78656 TACTGTTCCGGCATATTTTAACGATTCTCAGCGTCAGGCGACCAAAGACGCTGGAACGAT 78597 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 | |||| | |||||| | || |||||||| ||||| || || |||||| |||| ||||| Sbjct 78596 TTCTGGTTTGAATGTTTTGCGAATTATCAACGAACCAACAGCGGCTGCAATTGCTTATGG 78537 Query 550528 ACTTGATA 550535 |||||||| Sbjct 78536 ACTTGATA 78529 >seq1033 Length=69817 Score = 136 bits (150), Expect = 3e-26 Identities = 325/485 (67%), Gaps = 11/485 (2%) Strand=Plus/Minus Query 550026 GTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAA 550085 ||||||| |||| | |||||| || |||||||||||||||||||| || || | | Sbjct 53349 GTGTTGGAGTTTTCAAGAATGGTCGTGTAGAAATTATTGCCAATGATCAGGGCAATCGTA 53290 Query 550086 CTACTCCATCTTATGTTTCTTTCAC---GGAAACTGAACATTTAGTTGGTGATGCAGCAA 550142 ||| || || ||||| |||| || |||| ||| | | | | || ||| | || | Sbjct 53289 TTACCCCGTCGTATGTGGCTTTTACACCGGAAGGTGAGCGTCTGATCGGCGATTCCGCGA 53230 Query 550143 AATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAA 550202 || |||| || |||||| ||||| | || |||||||| ||| | ||||| Sbjct 53229 AAAATCAGTTGACCACCAATCCTGAGAATACGGTATTCGATGCTAAGCGTATGGTTGGAC 53170 Query 550203 GAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTA 550262 || | || || | |||| || ||| || ||||| || | | ||||| Sbjct 53169 GAGAATGGTCGGACAAGAGTCTTCAAGCGGATCGTAAAATGTGGCCGTTT-ACAGTGTTA 53111 Query 550263 -ATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAACAATT-TTC 550320 | || | ||||| | || || ||| | | || || || |||| ||| Sbjct 53110 GAAAAATCAAGCAAACCGAACGTTCAACTCACTGTTAACGG---TGAAAAGAAATTGTTC 53054 Query 550321 AC--CAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTT 550378 || | ||| |||||||| | |||||||| ||||||||||| ||| ||| |||| | Sbjct 53053 ACTCCCGAAGAAATTTCAGCGATGGTTTTGTTGAAAATGAAAGAAATTGCCGAAGCTTAT 52994 Query 550379 GTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAA 550438 | || ||||||| | |||| || | || || || || ||||| || || ||||| Sbjct 52993 TTGGGCAAAGAAGTGAAAAATGCCGTCGTCACGGTTCCTGCTTATTTCAACGATGCACAA 52934 Query 550439 CGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAAT 550498 ||||||||||| |||||||| || |||||||| |||||||| |||| || || || Sbjct 52933 CGTCAAGCTACCAAAGATGCGGGCACCATTGCTGGTCTTAATGTAGTTCGAATCATTAAC 52874 Query 550499 GAACC 550503 ||||| Sbjct 52873 GAACC 52869 Score = 100 bits (110), Expect = 2e-15 Identities = 255/386 (66%), Gaps = 8/386 (2%) Strand=Plus/Minus Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 || ||||||| || || ||||||||||| ||||| || | ||||| | | |||||| Sbjct 52108 GTATTAATCCTGACGAAGCTGTTGCCTACGGTGCTGCGGTACAAGCTGGCGTAATTTCTG 52049 Query 552265 GACAAACTGATGAAAA-ACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTT 552323 | ||| ||| | ||| | | |||| || | ||||| | ||| | || | Sbjct 52048 G------TGAAGAAGATACTGGTGA-TCTTGTGCTGTTGGATGTCAATCCGTTGACTTTG 51996 Query 552324 GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCT 552383 || | ||||| || || || | ||||| || || || || ||||| | || Sbjct 51995 GGAATTGAAACTGTCGGCGGAGTGATGACGAAACTGATTCCCAGGAATACGGTAGTGCCG 51936 Query 552384 TGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 || ||||| | |||| || | | || ||||| | | ||||| |||||| Sbjct 51935 ACCAAGAAATCGCAGATATTCAGCACCGCTGCCGACAATCAGCCCACGGTTACTATTCAA 51876 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTA 552503 |||| ||||| ||| || | | || ||||| ||| | | ||||| | || || | Sbjct 51875 GTTTTCGAAGGCGAACGACCAATGACAAAAGACAATCACCTTCTTGGCAAGTTCGATCTT 51816 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 || || ||||| |||||||| || || || ||||||||||| || |||||||| ||| Sbjct 51815 ACTGGCATACCTCCGGCTCCTCGCGGTGTGCCACAAATTGAAGTCACATTCGATATTGAT 51756 Query 552564 GCCAATGGAATTTTGAATGTGACTGC 552589 | ||||| |||||| | || || || Sbjct 51755 GTGAATGGTATTTTGCACGTCACCGC 51730 >seq684 Length=410242 Score = 118 bits (130), Expect = 9e-21 Identities = 114/144 (79%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || |||||||| | | ||||||||| || |||||||||||||||||||||||||| Sbjct 337744 TTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTA 337803 Query 563392 TGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGT 563450 ||| || ||| ||||| |||| || | || ||| | ||| | ||||| ||||| Sbjct 337804 CCTTTCACATTCTCTATTGTGTCAG-ATGGTTCCACTTCCAAAGTGATGGTTTTCCCAGT 337862 Query 563451 AAGAGTTTTAACGAAAATTTGCAT 563474 ||| |||||||||||||||||||| Sbjct 337863 AAGCGTTTTAACGAAAATTTGCAT 337886 Score = 107 bits (118), Expect = 2e-17 Identities = 110/141 (78%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || ||||| || | | ||||||||| || |||||||||||||||||||| ||||| | Sbjct 366756 CCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTATTTTGCCT 366815 Query 563395 TTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| || |||||||||| || | || ||| | || | ||||| |||||||| Sbjct 366816 TTTACATTTTCTATTGTATCAG-ATGGTTCCACTTCCAAGGTGATGGTTTTCCCAGTAAG 366874 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 |||||||||||||||||||| Sbjct 366875 CGTTTTAACGAAAATTTGCAT 366895 Score = 104 bits (114), Expect = 2e-16 Identities = 111/144 (77%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || |||||||| | | ||| ||||| || |||||||| ||||||||||||||||| Sbjct 338028 TTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTA 338087 Query 563392 TGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGT 563450 ||| || ||||||||||||| || | || ||| | || | ||||| ||||| Sbjct 338088 CCTTTCACAATTTCAATTGTATCAG-ATGGTTCCACTTCCAAGGTGATGGTTTTCCCAGT 338146 Query 563451 AAGAGTTTTAACGAAAATTTGCAT 563474 ||| || ||||||||||||||||| Sbjct 338147 AAGCGTCTTAACGAAAATTTGCAT 338170 Score = 104 bits (114), Expect = 2e-16 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || ||||| || | | |||||||| || |||||||||||||||||||| ||||| | Sbjct 366184 CCAGCAAATATCAAACGCTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTATTTTGCCT 366243 Query 563395 TTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| || |||||||||| || | || ||| | || | ||||| |||||||| Sbjct 366244 TTTACATTTTCTATTGTATCAG-ATGGTTCCACTTCCAAGGTGATGGTTTTCCCAGTAAG 366302 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 |||||||||||||||||||| Sbjct 366303 CGTTTTAACGAAAATTTGCAT 366323 Score = 104 bits (114), Expect = 2e-16 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || ||||| || | | |||||||| || |||||||||||||||||||| ||||| | Sbjct 366471 CCAGCAAATATCAAACGCTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTATTTTGCCT 366530 Query 563395 TTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| ||||||||||| | || | || ||| | ||| | || || |||||||| Sbjct 366531 TTTACATTTTCAATTGTATC-GGATGGTTCCACTTCCAAAGTGATGGTCTTGCCAGTAAG 366589 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 ||| ||||||||||||||||| Sbjct 366590 AGTCTTAACGAAAATTTGCAT 366610 Score = 98.7 bits (108), Expect = 8e-15 Identities = 108/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || ||||| || | | ||||||||| || |||||||| ||||||||||||||||| | Sbjct 336894 CCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCT 336953 Query 563395 TTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| ||| ||||| || | || ||| ||| | ||| | ||||| ||||| || Sbjct 336954 TTTACATTCTCTATTGTGTCGGATGGTTCTAC-TTCCAAAGTGATGGTTTTGCCAGTGAG 337012 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 || ||||||||||||||||| Sbjct 337013 GGTCTTAACGAAAATTTGCAT 337033 Score = 98.7 bits (108), Expect = 8e-15 Identities = 108/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || ||||| || | | ||||||||| || |||||||||||||||||||| ||||| | Sbjct 367041 CCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTATTTTGCCT 367100 Query 563395 TTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| ||| ||||| || | || | || ||| | ||| | ||||| ||||| || Sbjct 367101 TTTACATTCTCTATTGTGTC-GGATGGTTCCACTTCCAAAGTGATGGTTTTGCCAGTGAG 367159 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 || ||||||||||||||||| Sbjct 367160 GGTCTTAACGAAAATTTGCAT 367180 Score = 95.1 bits (104), Expect = 1e-13 Identities = 107/141 (76%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || ||||| || | | ||||||||| || ||||||||||| |||||||| ||||| | Sbjct 337464 CCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCCTTATCTTGTATTTTGCCT 337523 Query 563395 TTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| ||| ||||| || | || ||| ||| | ||| | ||||| ||||| || Sbjct 337524 TTTACATTCTCTATTGTGTCGGATGGTTCTAC-TTCCAAAGTGATGGTTTTGCCAGTGAG 337582 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 || ||||||||||||||||| Sbjct 337583 GGTCTTAACGAAAATTTGCAT 337603 Score = 93.3 bits (102), Expect = 3e-13 Identities = 111/148 (75%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 563328 TTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAAT 563387 ||| || || ||||| || | | ||||||||| || |||||||||||||||||||| || Sbjct 338588 TTGCTTACCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTAT 338647 Query 563388 TTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTAC 563446 ||| |||||| || ||||| || | || | || ||| | ||| | ||||| | Sbjct 338648 TTTGCCTTTTACATTTTCTATTGTGTC-GGATGGTTCCACTTCCAAAGTGATGGTTTTGC 338706 Query 563447 CAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| || || |||||||| |||||||| Sbjct 338707 CAGTGAGGGTCTTAACGAATATTTGCAT 338734 Score = 93.3 bits (102), Expect = 3e-13 Identities = 117/158 (74%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 563318 AATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTT 563377 || || || ||| || || ||||| || || | |||||||| || ||||||||||||| Sbjct 367993 AACCTGCAGGTTACTTACCAGCAAATATCAGACGCTGCTGATCGGGTGGAATTCCTTCTT 368052 Query 563378 TATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTA 563436 |||| |||||||| || || |||||||| || | | | | || ||| |||||| Sbjct 368053 TATCCTGAATTTTACCCTTCACATTTTCAATTGTGTCTGAG-GCTTCCACTTCCAGAGTA 368111 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| ||||| |||||||| || || || ||||| Sbjct 368112 ATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCAT 368149 Score = 86.0 bits (94), Expect = 5e-11 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 ||||||||||| | | |||||||| || |||||||| |||||||| || ||||| | Sbjct 337176 CCGGCAAAAATCAAACGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGTATTTTGCCT 337235 Query 563395 TTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAG 563453 || || || ||||| || | || | || ||| | ||| | ||||| ||||| || Sbjct 337236 TTCACATTTTCTATTGTGTC-GGATGGTTCCACTTCCAAAGTGATGGTTTTGCCAGTGAG 337294 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 || ||||||||||||||||| Sbjct 337295 GGTCTTAACGAAAATTTGCAT 337315 Score = 86.0 bits (94), Expect = 5e-11 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || ||||| || | | |||||||| || |||||||| |||||||| || ||||| | Sbjct 338312 CCAGCAAATATCAAACGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGTATTTTGCCT 338371 Query 563395 TTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| ||| |||||||||| || | | || | ||| | ||||| |||||||| Sbjct 338372 TTTACATTCTCTATTGTATCAGA-TGGTTCGACCTCCAAAGTGATGGTTTTCCCAGTAAG 338430 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 || ||||| ||||||||||| Sbjct 338431 CGTCTTAACAAAAATTTGCAT 338451 >seq285 Length=127634 Score = 104 bits (114), Expect = 2e-16 Identities = 123/164 (75%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 370652 TGCAACTGATGATGAAATTAAAAAAGCATACAAAAAACTAGCAATGAAATATCATCCTGA 370711 ||| ||||| |||||||| |||||||| || || | || |||||||||||||||| Sbjct 6333 TGCCACTGAAGATGAAATCAAAAAAGCTTATCGGAAGATGGCGTTGAAATATCATCCTGA 6392 Query 370712 TAGAAACAAAAGTCCTGATGCTGAAGAAAAGTTTaaaaaaaTTAGCA-ATGCACATGGTA 370770 | |||||||| |||||||| ||| || |||||| | ||| ||| | ||| | | | Sbjct 6393 CAAGAACAAAAGCCCTGATGCAGAAAGCAAATTTAAAGAGATT-GCAGAAGCATACGATG 6451 Query 370771 TTCTTTCTGATCCTGAAAAGAAACAAACTTATGATAGATTTGGT 370814 |||| |||| || |||||||| ||| || |||| ||||||| Sbjct 6452 TTCTGAGTGATGCTAAAAAGAAAGAAATATACGATAAATTTGGT 6495 >seq1852 Length=8990 Score = 96.9 bits (106), Expect = 3e-14 Identities = 110/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || ||||| || | ||||||||||||||||||||| ||||| ||||| |||||||| Sbjct 5805 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 5746 Query 563392 TGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAG 563449 ||| || || || || || || || || ||| || || | |||||| |||| Sbjct 5745 CTTTTGACATTTTCGATGGTGTC--TGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAG 5688 Query 563450 TAAGAGTTTTAACGAAAATTTGCATA 563475 ||||||| || ||||| || |||||| Sbjct 5687 TAAGAGTCTTCACGAATATCTGCATA 5662 Score = 96.9 bits (106), Expect = 3e-14 Identities = 110/145 (76%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || ||||| || | || |||||||||||| ||||| |||||||||||||||||||| Sbjct 6524 TTACCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCTTTATCTTGAATTTTA 6465 Query 563392 TGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGT 563450 ||| || ||||||||||||| || ||| ||| | || | ||||| ||||| Sbjct 6464 CCTTTCACATTTTCAATTGTATCAGATGGCTCTAC-TTCCAATGTGATTGTTTTTCCAGT 6406 Query 563451 AAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || ||||| |||||| Sbjct 6405 TAATGTTTTCACAAAAATCTGCATA 6381 Score = 87.8 bits (96), Expect = 1e-11 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || ||||| || | || |||||||||||| ||||| ||||| |||||||||||||| Sbjct 6237 TTACCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAATTTTA 6178 Query 563392 TGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGT 563450 || || ||||||||||||| || ||| ||| | || | ||||| ||||| Sbjct 6177 CCCTTCACATTTTCAATTGTATCAGATGGCTCTAC-TTCCAATGTGATTGTTTTTCCAGT 6119 Query 563451 AAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || ||||| |||||| Sbjct 6118 TAATGTTTTCACAAAAATCTGCATA 6094 >seq833 Length=82521 Score = 96.9 bits (106), Expect = 3e-14 Identities = 110/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || ||||| || | ||||||||||||||||||||| ||||| ||||| |||||||| Sbjct 79955 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 79896 Query 563392 TGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAG 563449 ||| || || || || || || || || ||| || || | |||||| |||| Sbjct 79895 CTTTTGACATTTTCGATGGTGTC--TGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAG 79838 Query 563450 TAAGAGTTTTAACGAAAATTTGCATA 563475 ||||||| || ||||| || |||||| Sbjct 79837 TAAGAGTCTTCACGAATATCTGCATA 79812 Score = 96.9 bits (106), Expect = 3e-14 Identities = 110/145 (76%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || ||||| || | || |||||||||||| ||||| |||||||||||||||||||| Sbjct 80674 TTACCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCTTTATCTTGAATTTTA 80615 Query 563392 TGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGT 563450 ||| || ||||||||||||| || ||| ||| | || | ||||| ||||| Sbjct 80614 CCTTTCACATTTTCAATTGTATCAGATGGCTCTAC-TTCCAATGTGATTGTTTTTCCAGT 80556 Query 563451 AAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || ||||| |||||| Sbjct 80555 TAATGTTTTCACAAAAATCTGCATA 80531 Score = 87.8 bits (96), Expect = 1e-11 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || ||||| || | || |||||||||||| ||||| ||||| |||||||||||||| Sbjct 80387 TTACCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAATTTTA 80328 Query 563392 TGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGT 563450 || || ||||||||||||| || ||| ||| | || | ||||| ||||| Sbjct 80327 CCCTTCACATTTTCAATTGTATCAGATGGCTCTAC-TTCCAATGTGATTGTTTTTCCAGT 80269 Query 563451 AAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || ||||| |||||| Sbjct 80268 TAATGTTTTCACAAAAATCTGCATA 80244 >seq2020 Length=251690 Score = 93.3 bits (102), Expect = 3e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 367540 GAACGTATTGGAAGATGGATTGACGTAAAAAATGAATATAAAACAATGGATACTAATTTC 367599 ||||| |||| ||||||| || | |||||||| |||||||| | || | | |||| Sbjct 52723 GAACGACTTGGTCGATGGATAGATTTTAAAAATGATTATAAAACTTTATATTCAAGTTTC 52664 Query 367600 ATGGAATCTGTTATTTGGGCATTTAAACAATTATACGAACGCGGTATGATTTTTGAAGGT 367659 ||||||||||| |||| ||| ||||| | || | ||| | | | |||| Sbjct 52663 ATGGAATCTGTATGGTGGGTATTCAAACAGCTGTATAACAAAGGTCTTGTCTACAGAGGT 52604 Query 367660 TATAAAGTAATGCCATATTCAACTGGTTGTAATACTGCTTTGTCACATTTTGAAGCCAAA 367719 ||||| ||||||| ||| |||| ||| ||| | |||||| |||||||| | | Sbjct 52603 GTAAAAGTGATGCCATTTTCTACTGCTTGCGGAACTCCATTGTCAAATTTTGAATCTGGA 52544 Query 367720 CAAAATTATCGAGAAGTAGTTGATCC 367745 |||||||| |||||| ||||||| Sbjct 52543 CAAAATTACAAAGAAGTCATTGATCC 52518 >seq1934 Length=792349 Score = 86.0 bits (94), Expect = 5e-11 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 550344 TTTTAATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCA 550402 |||| |||||||||||| ||||||| || | || | |||| || |||| | ||||| Sbjct 484106 TTTTGATGAAAATGAAAGAAACAGCTGAGAG-TTATCTTGGACAGAAAGTCAGCAATGCA 484164 Query 550403 GTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCA 550443 || || || |||||||| ||||||||||| ||||||||||| Sbjct 484165 GTGATTACAGTACCAGCGTATTTTAATGATTCACAACGTCA 484205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029161567575580