Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20papuae_20[genbank_20GCA_5F001447755.1_202015-11-24]
2,542 sequences; 46,844,510 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq265 327 7e-84
seq684 114 8e-20
seq1033 113 3e-19
seq2020 100 2e-15
seq285 95.1 8e-14
seq1934 91.5 1e-12
seq1852 86.0 4e-11
seq833 86.0 4e-11
>seq265
Length=128937
Score = 327 bits (362), Expect = 7e-84
Identities = 442/611 (72%), Gaps = 11/611 (2%)
Strand=Plus/Minus
Query 474317 ATGTCCAGAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGG 474376
||||| | | ||| ||||| |||||||| || ||||| ||||||||||| | || |
Sbjct 79084 ATGTCGAAGAATGCTATTGGAATTGATTTGGGTACTACCTACAGTTGTGTTGGCGTGTTC 79025
Query 474377 CAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATAT 474436
|| |||||||||| ||||| ||||| || || ||||| ||| | || || ||| |||
Sbjct 79024 CAGCATGGTAAAGTTGAAATTATTGCAAACGATCAAGGGAATCGTACCACGCCAAGTTAT 78965
Query 474437 GTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCT 474496
||| |||| || || || |||| || ||||| ||||| || || |||| | ||| |
Sbjct 78964 GTTGCTTTCACCGATACCGAACGACTGATTGGCGATGCGGCAAAGAATCAGGTTGCGTTG 78905
Query 474497 AATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACC 474556
|||||| |||||| |||||||||| || || | || |||||| ||||||||| |
Sbjct 78904 AATCCTCATAATACAGTTTTTGATGCGAAGCGACTTATCGGTCGTCGATTTGATGATGCT 78845
Query 474557 ACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCA 474616
|||| || ||||| ||| |||||||| ||||| || || |||| ||| |||||
Sbjct 78844 GCTGTGCAGTCTGACATGAAACATTGGCCATTTAAAGTTATCAATGATGGAACGAAACCT 78785
Query 474617 TATATAGAAG--CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTT 474674
| || ||| |||||| ||| || | || |||| |||||||| ||||
Sbjct 78784 AAAATTCAAGTCGAATACA--AAGGCGAGTCGAAGTCATTTACACCGGAAGAAATCAGCG 78727
Query 474675 CAATGGTTTTAGCCAAAATGAAACAAACCGC--GAGCTCATATCTTGGACAAGAAGTAAC 474732
| ||||| |||| || ||||| |||| || |||| ||| | ||| || || |
Sbjct 78726 CTATGGTGTTAGTGAAGATGAAGGAAACTGCCGAAGCT--TATTTGGGAAAAACTGTTAA 78669
Query 474733 TGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGA 474792
|| || |||||||||||||| ||||||||||| |||||||| ||||| || || |||||
Sbjct 78668 GGACGCCGTAATTACTGTTCCGGCATATTTTAACGATTCTCAGCGTCAGGCGACCAAAGA 78609
Query 474793 TGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGC 474852
|| |||| ||| | ||| | |||||||| || ||||| || ||||||||||| || ||
Sbjct 78608 CGCTGGAACGATTTCTGGTTTGAATGTTTTGCGAATTATCAACGAACCAACAGCGGCTGC 78549
Query 474853 ACTTGCTTATGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGA--- 474909
| |||||||||| ||||||| || || | ||| ||||||| | || |||||
Sbjct 78548 AATTGCTTATGGACTTGATAGAAAGGGTGGCGGTGAACGAAATGTTCTGATATTTGACCT 78489
Query 474910 TTGTGGAGGTA 474920
| |||| ||||
Sbjct 78488 TGGTGGTGGTA 78478
>seq684
Length=410242
Score = 114 bits (126), Expect = 8e-20
Identities = 112/142 (79%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 480629 CTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTT 480688
||| ||||||||||| | |||||||||||| || |||||||| || || |||||||| ||
Sbjct 338027 CTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTT 338086
Query 480689 TTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGG 480747
||| ||| |||||| ||||||| || | | || ||| ||| || ||||| || |
Sbjct 338087 ACCTTTCACAATTTCAATTGTATCAGATGGTTCCACTTCCAA-GGTGATGGTTTTCCCAG 338145
Query 480748 TGAGAGTCTTAACGAAAATTTG 480769
| || |||||||||||||||||
Sbjct 338146 TAAGCGTCTTAACGAAAATTTG 338167
Score = 93.3 bits (102), Expect = 3e-13
Identities = 109/145 (75%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 480626 TTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAAT 480685
|||||| |||||||| || | |||||| ||||| || ||||||||||| || ||||| ||
Sbjct 338588 TTGCTTACCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTAT 338647
Query 480686 CTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTAC 480744
|| ||| ||| ||| || || || | || | | || ||| || || ||||| |
Sbjct 338648 TTTGCCTTTTACATTTTCTATTGTGTCGGATGGTTCCACTTCCAA-AGTGATGGTTTTGC 338706
Query 480745 CGGTGAGAGTCTTAACGAAAATTTG 480769
| ||||| ||||||||||| |||||
Sbjct 338707 CAGTGAGGGTCTTAACGAATATTTG 338731
Score = 93.3 bits (102), Expect = 3e-13
Identities = 105/138 (76%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692
|||||||| || | |||||| ||||| || ||||||||||| || ||||| || || |
Sbjct 366756 CCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTATTTTGCCT 366815
Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751
|| ||| ||| || ||||||| || | | || ||| ||| || ||||| || || ||
Sbjct 366816 TTTACATTTTCTATTGTATCAGATGGTTCCACTTCCAA-GGTGATGGTTTTCCCAGTAAG 366874
Query 480752 AGTCTTAACGAAAATTTG 480769
|| ||||||||||||||
Sbjct 366875 CGTTTTAACGAAAATTTG 366892
Score = 91.5 bits (100), Expect = 1e-12
Identities = 107/142 (75%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 480629 CTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTT 480688
||| ||||||||||| | |||||| ||||| || ||||||||||| || |||||||| ||
Sbjct 337743 CTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTT 337802
Query 480689 TTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGG 480747
||| ||| || || || |||| || | | || ||| || || ||||| || |
Sbjct 337803 ACCTTTCACATTCTCTATTGTGTCAGATGGTTCCACTTCCAA-AGTGATGGTTTTCCCAG 337861
Query 480748 TGAGAGTCTTAACGAAAATTTG 480769
| || || ||||||||||||||
Sbjct 337862 TAAGCGTTTTAACGAAAATTTG 337883
Score = 89.7 bits (98), Expect = 3e-12
Identities = 104/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692
|||||||| || | |||||| ||||| || |||||||||||||| ||||| || || |
Sbjct 337464 CCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCCTTATCTTGTATTTTGCCT 337523
Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751
|| ||| || || || || | || | | || ||| || || ||||| || |||||
Sbjct 337524 TTTACATTCTCTATTGTGTCGGATGGTTCTACTTCCAA-AGTGATGGTTTTGCCAGTGAG 337582
Query 480752 AGTCTTAACGAAAATTTG 480769
|||||||||||||||||
Sbjct 337583 GGTCTTAACGAAAATTTG 337600
Score = 89.7 bits (98), Expect = 3e-12
Identities = 104/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692
|||||||| || | ||| || ||||| || ||||||||||| || ||||| || || |
Sbjct 366184 CCAGCAAATATCAAACGCTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTATTTTGCCT 366243
Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751
|| ||| ||| || ||||||| || | | || ||| ||| || ||||| || || ||
Sbjct 366244 TTTACATTTTCTATTGTATCAGATGGTTCCACTTCCAA-GGTGATGGTTTTCCCAGTAAG 366302
Query 480752 AGTCTTAACGAAAATTTG 480769
|| ||||||||||||||
Sbjct 366303 CGTTTTAACGAAAATTTG 366320
Score = 89.7 bits (98), Expect = 3e-12
Identities = 104/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692
|||||||| || | ||| || ||||| || ||||||||||| || ||||| || || |
Sbjct 366471 CCAGCAAATATCAAACGCTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTATTTTGCCT 366530
Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751
|| ||| |||||| ||||| | || | | || ||| || || || || || || ||
Sbjct 366531 TTTACATTTTCAATTGTATCGGATGGTTCCACTTCCAA-AGTGATGGTCTTGCCAGTAAG 366589
Query 480752 AGTCTTAACGAAAATTTG 480769
||||||||||||||||||
Sbjct 366590 AGTCTTAACGAAAATTTG 366607
Score = 86.0 bits (94), Expect = 4e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692
|||||||||||||| || |||||||| ||||| || ||||| |||||||||||||| |
Sbjct 339226 CCAGCAAAAATAAGCCGCTGTTGATCTGGAGGGATGCCTTCTTTGTCTTGAATCTTACTT 339285
Query 480693 TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGA 480752
|| || ||||| ||||| | | | ||| || ||||| ||||| || || |
Sbjct 339286 TTTACGTTCTCAATTGTATCTGACGGCTCAACTTCTAGTGTAATCGTTTTTCCTGTCAAC 339345
Query 480753 GTCTTAACGAAAATTTG 480769
||||| || || || ||
Sbjct 339346 GTCTTCACAAATATCTG 339362
Score = 86.0 bits (94), Expect = 4e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692
|||||||||||||| || |||||||| ||||| || ||||| |||||||||||||| |
Sbjct 367669 CCAGCAAAAATAAGTCGCTGTTGATCTGGAGGGATGCCTTCTTTGTCTTGAATCTTACTT 367728
Query 480693 TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGA 480752
|| || ||||| ||||| | | | ||| || ||||| ||||| || || |
Sbjct 367729 TTTACGTTCTCAATTGTATCTGACGGCTCAACTTCTAGTGTAATCGTTTTTCCTGTCAAC 367788
Query 480753 GTCTTAACGAAAATTTG 480769
||||| || || || ||
Sbjct 367789 GTCTTCACAAATATCTG 367805
>seq1033
Length=69817
Score = 113 bits (124), Expect = 3e-19
Identities = 149/205 (73%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 474638 GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAA 474697
||||||| ||| || | || ||| ||||||| | |||||||| |||||||||
Sbjct 53071 GGTGAAAAGAAATTGTTCACTCCCGAAGAAATTTCAGCGATGGTTTTGTTGAAAATGAAA 53012
Query 474698 CAAACCGCG--AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAG 474755
||| || |||| ||| | || ||||||| | |||| || | || ||||| |
Sbjct 53011 GAAATTGCCGAAGCT--TATTTGGGCAAAGAAGTGAAAAATGCCGTCGTCACGGTTCCTG 52954
Query 474756 CATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTA 474815
| ||||| || ||| | ||||||||||| || ||||||||||| | ||||| |||||||
Sbjct 52953 CTTATTTCAACGATGCACAACGTCAAGCTACCAAAGATGCGGGCACCATTGCTGGTCTTA 52894
Query 474816 ATGTTTTACGTATTATTAATGAACC 474840
|||| | || || ||||| |||||
Sbjct 52893 ATGTAGTTCGAATCATTAACGAACC 52869
Score = 111 bits (122), Expect = 1e-18
Identities = 246/366 (67%), Gaps = 6/366 (2%)
Strand=Plus/Minus
Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852
|||||||| ||||||||||| || || ||||| || ||||| | | | || ||| ||
Sbjct 52103 AATCCTGACGAAGCTGTTGCCTACGGTGCTGCGGTACAAGCTGGCGTAATTTCTGGTGAA 52044
Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912
|| ||| ||| | || |||| || | || || | ||| | | || || ||
Sbjct 52043 ---GA--AGATACTGG-TGATCTTGTGCTGTTGGATGTCAATCCGTTGACTTTGGGAATT 51990
Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA 475972
||||| || || || | ||||| || || ||| ||| ||||| | || |||
Sbjct 51989 GAAACTGTCGGCGGAGTGATGACGAAACTGATTCCCAGGAATACGGTAGTGCCGACCAAG 51930
Query 475973 AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032
||||| | |||| ||| | | || ||||| | || || || || ||| | ||
Sbjct 51929 AAATCGCAGATATTCAGCACCGCTGCCGACAATCAGCCCACGGTTACTATTCAAGTTTTC 51870
Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092
||||| ||| || | | || ||||| ||| || ||||| | || ||||| ||
Sbjct 51869 GAAGGCGAACGACCAATGACAAAAGACAATCACCTTCTTGGCAAGTTCGATCTTACTGGC 51810
Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152
|| ||||| ||||| | || || || ||||||||||| || || |||||||||| |||
Sbjct 51809 ATACCTCCGGCTCCTCGCGGTGTGCCACAAATTGAAGTCACATTCGATATTGATGTGAAT 51750
Query 476153 GGTATT 476158
||||||
Sbjct 51749 GGTATT 51744
Score = 87.8 bits (96), Expect = 1e-11
Identities = 110/151 (73%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 290852 GGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAATCTAAAGTTGCC 290911
||||| || || |||| | ||||| |||||| ||||| | ||| |||| || ||
Sbjct 52869 GGTTCGTTAATGATTCGAACTACATTAAGACCAGCAATGGTGCCCGCATCTTTGGTAGCT 52928
Query 290912 TGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCtttttccactttcttt 290971
|| ||||| ||||| || ||||||||||| || || | || || |||| ||||| ||
Sbjct 52929 TGACGTTGTGCATCGTTGAAATAAGCAGGAACCGTGACGACGGCATTTTTCACTTCTTTG 52988
Query 290972 ttcaaataattttctgccatttgttttattt 291002
||||||| ||| || |||| ||| ||||
Sbjct 52989 CCCAAATAAGCTTCGGCAATTTCTTTCATTT 53019
>seq2020
Length=251690
Score = 100 bits (110), Expect = 2e-15
Identities = 166/235 (71%), Gaps = 5/235 (2%)
Strand=Plus/Minus
Query 296072 GAATTGGAAGATGGATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGG 296131
|| |||| ||||||| ||| |||| ||||| |||||||| | || || ||| ||||
Sbjct 52719 GACTTGGTCGATGGATAGATTTTAAAAATGATTATAAAACTTTATATTCAAGTTTCATGG 52660
Query 296132 AATCTGTTATTTGGTCATTTAAACAACTTTATGA-AAAGGAAATGATTTTTGAAGGTTAT 296190
||||||| ||| ||| ||||| || ||| | ||||| || | | ||||
Sbjct 52659 AATCTGTATGGTGGGTATTCAAACAGCTGTATAACAAAGGTCTTG-TCTACAGAGGTGTA 52601
Query 296191 AAAGTTATGCCTTATTCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAA 296250
||||| ||||| | |||||||| |||| || ||||| || ||||||| | ||||
Sbjct 52600 AAAGTGATGCCATTTTCTACTGCTTGCGGAACTCCATTGTCAAATTTTGAATCTGGACAA 52541
Query 296251 AATTATAAAGAGATTATTGATCCATCT-GTTACTTGTTGTTTTGAAATTATTTCT 296304
||||| ||||| | |||||||| || |||| | || ||| || || |||||
Sbjct 52540 AATTACAAAGAAGTCATTGATCCTGCTAGTTAGTAATTCTTT--AATTTGTTTCT 52488
>seq285
Length=127634
Score = 95.1 bits (104), Expect = 8e-14
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 299112 CTGAAGAAGAGATTAAAAAAGCTTATAAAAAATTAGCTATGAAATATCATCCTGACAGAA 299171
||||||| || || |||||||||||| || | || |||||||||||||||||| |
Sbjct 6338 CTGAAGATGAAATCAAAAAAGCTTATCGGAAGATGGCGTTGAAATATCATCCTGACAAGA 6397
Query 299172 ATAAAAGTCCTGAAGCGGAAGAAAAGTTTaaaaaaaTAAGTCATGCTTATAGTATTCTTT 299231
| ||||| ||||| || ||| || |||||| | || | || || | ||||
Sbjct 6398 ACAAAAGCCCTGATGCAGAAAGCAAATTTAAAGAGATTGCAGAAGCATACGATGTTCTGA 6457
Query 299232 CAGATCCAACCAAAAAAGAAGTATATGATAAATTTGGAGAAGAAGGATTAAATTCAGGAA 299291
||| | | || |||||| |||| ||||||||||| |||||||| || || || |
Sbjct 6458 GTGATGCTAAAAAGAAAGAAATATACGATAAATTTGGTGAAGAAGGCTTGAAAGGTGGGA 6517
Query 299292 TGAGTGATGG 299301
||| || |||
Sbjct 6518 TGAATGCTGG 6527
>seq1934
Length=792349
Score = 91.5 bits (100), Expect = 1e-12
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149
||||| ||||| || || | |||||||| ||||| |||||| |||||||||||||||||
Sbjct 485852 GGTATACCTCCGGCCCCTCGTGGAGTTCCACAAATAGAAGTTGCTTTTGATATTGATGCA 485911
Query 476150 AATGGTATTCTTAATGTTACTGCTTGTGAT 476179
|||||||| || |||| | |||| | |||
Sbjct 485912 AATGGTATAGTTCATGTCAGTGCTCGAGAT 485941
>seq1852
Length=8990
Score = 86.0 bits (94), Expect = 4e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 480630 TTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTT 480689
|| || ||||| || | | ||| |||||||||||||| |||||||| || ||||| ||
Sbjct 5805 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 5746
Query 480690 TGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTG 480749
||||||| ||| || || || | || | ||| || || |||||||| || ||
Sbjct 5745 CTTTTGACATTTTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 5686
Query 480750 AGAGTCTTAACGAAAATTTG 480769
|||||||| ||||| || ||
Sbjct 5685 AGAGTCTTCACGAATATCTG 5666
>seq833
Length=82521
Score = 86.0 bits (94), Expect = 4e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 480630 TTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTT 480689
|| || ||||| || | | ||| |||||||||||||| |||||||| || ||||| ||
Sbjct 79955 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 79896
Query 480690 TGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTG 480749
||||||| ||| || || || | || | ||| || || |||||||| || ||
Sbjct 79895 CTTTTGACATTTTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 79836
Query 480750 AGAGTCTTAACGAAAATTTG 480769
|||||||| ||||| || ||
Sbjct 79835 AGAGTCTTCACGAATATCTG 79816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268070161286216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |