Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20papuae_20[genbank_20GCA_5F001447755.1_202015-11-24] 2,542 sequences; 46,844,510 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq265 327 7e-84 seq684 114 8e-20 seq1033 113 3e-19 seq2020 100 2e-15 seq285 95.1 8e-14 seq1934 91.5 1e-12 seq1852 86.0 4e-11 seq833 86.0 4e-11 >seq265 Length=128937 Score = 327 bits (362), Expect = 7e-84 Identities = 442/611 (72%), Gaps = 11/611 (2%) Strand=Plus/Minus Query 474317 ATGTCCAGAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGG 474376 ||||| | | ||| ||||| |||||||| || ||||| ||||||||||| | || | Sbjct 79084 ATGTCGAAGAATGCTATTGGAATTGATTTGGGTACTACCTACAGTTGTGTTGGCGTGTTC 79025 Query 474377 CAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATAT 474436 || |||||||||| ||||| ||||| || || ||||| ||| | || || ||| ||| Sbjct 79024 CAGCATGGTAAAGTTGAAATTATTGCAAACGATCAAGGGAATCGTACCACGCCAAGTTAT 78965 Query 474437 GTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCT 474496 ||| |||| || || || |||| || ||||| ||||| || || |||| | ||| | Sbjct 78964 GTTGCTTTCACCGATACCGAACGACTGATTGGCGATGCGGCAAAGAATCAGGTTGCGTTG 78905 Query 474497 AATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACC 474556 |||||| |||||| |||||||||| || || | || |||||| ||||||||| | Sbjct 78904 AATCCTCATAATACAGTTTTTGATGCGAAGCGACTTATCGGTCGTCGATTTGATGATGCT 78845 Query 474557 ACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCA 474616 |||| || ||||| ||| |||||||| ||||| || || |||| ||| ||||| Sbjct 78844 GCTGTGCAGTCTGACATGAAACATTGGCCATTTAAAGTTATCAATGATGGAACGAAACCT 78785 Query 474617 TATATAGAAG--CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTT 474674 | || ||| |||||| ||| || | || |||| |||||||| |||| Sbjct 78784 AAAATTCAAGTCGAATACA--AAGGCGAGTCGAAGTCATTTACACCGGAAGAAATCAGCG 78727 Query 474675 CAATGGTTTTAGCCAAAATGAAACAAACCGC--GAGCTCATATCTTGGACAAGAAGTAAC 474732 | ||||| |||| || ||||| |||| || |||| ||| | ||| || || | Sbjct 78726 CTATGGTGTTAGTGAAGATGAAGGAAACTGCCGAAGCT--TATTTGGGAAAAACTGTTAA 78669 Query 474733 TGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGA 474792 || || |||||||||||||| ||||||||||| |||||||| ||||| || || ||||| Sbjct 78668 GGACGCCGTAATTACTGTTCCGGCATATTTTAACGATTCTCAGCGTCAGGCGACCAAAGA 78609 Query 474793 TGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGC 474852 || |||| ||| | ||| | |||||||| || ||||| || ||||||||||| || || Sbjct 78608 CGCTGGAACGATTTCTGGTTTGAATGTTTTGCGAATTATCAACGAACCAACAGCGGCTGC 78549 Query 474853 ACTTGCTTATGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGA--- 474909 | |||||||||| ||||||| || || | ||| ||||||| | || ||||| Sbjct 78548 AATTGCTTATGGACTTGATAGAAAGGGTGGCGGTGAACGAAATGTTCTGATATTTGACCT 78489 Query 474910 TTGTGGAGGTA 474920 | |||| |||| Sbjct 78488 TGGTGGTGGTA 78478 >seq684 Length=410242 Score = 114 bits (126), Expect = 8e-20 Identities = 112/142 (79%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 480629 CTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTT 480688 ||| ||||||||||| | |||||||||||| || |||||||| || || |||||||| || Sbjct 338027 CTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTT 338086 Query 480689 TTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGG 480747 ||| ||| |||||| ||||||| || | | || ||| ||| || ||||| || | Sbjct 338087 ACCTTTCACAATTTCAATTGTATCAGATGGTTCCACTTCCAA-GGTGATGGTTTTCCCAG 338145 Query 480748 TGAGAGTCTTAACGAAAATTTG 480769 | || ||||||||||||||||| Sbjct 338146 TAAGCGTCTTAACGAAAATTTG 338167 Score = 93.3 bits (102), Expect = 3e-13 Identities = 109/145 (75%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 480626 TTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAAT 480685 |||||| |||||||| || | |||||| ||||| || ||||||||||| || ||||| || Sbjct 338588 TTGCTTACCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTAT 338647 Query 480686 CTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTAC 480744 || ||| ||| ||| || || || | || | | || ||| || || ||||| | Sbjct 338648 TTTGCCTTTTACATTTTCTATTGTGTCGGATGGTTCCACTTCCAA-AGTGATGGTTTTGC 338706 Query 480745 CGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||| ||||||||||| ||||| Sbjct 338707 CAGTGAGGGTCTTAACGAATATTTG 338731 Score = 93.3 bits (102), Expect = 3e-13 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||| || | |||||| ||||| || ||||||||||| || ||||| || || | Sbjct 366756 CCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTATTTTGCCT 366815 Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||| || ||||||| || | | || ||| ||| || ||||| || || || Sbjct 366816 TTTACATTTTCTATTGTATCAGATGGTTCCACTTCCAA-GGTGATGGTTTTCCCAGTAAG 366874 Query 480752 AGTCTTAACGAAAATTTG 480769 || |||||||||||||| Sbjct 366875 CGTTTTAACGAAAATTTG 366892 Score = 91.5 bits (100), Expect = 1e-12 Identities = 107/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 480629 CTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTT 480688 ||| ||||||||||| | |||||| ||||| || ||||||||||| || |||||||| || Sbjct 337743 CTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTT 337802 Query 480689 TTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGG 480747 ||| ||| || || || |||| || | | || ||| || || ||||| || | Sbjct 337803 ACCTTTCACATTCTCTATTGTGTCAGATGGTTCCACTTCCAA-AGTGATGGTTTTCCCAG 337861 Query 480748 TGAGAGTCTTAACGAAAATTTG 480769 | || || |||||||||||||| Sbjct 337862 TAAGCGTTTTAACGAAAATTTG 337883 Score = 89.7 bits (98), Expect = 3e-12 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||| || | |||||| ||||| || |||||||||||||| ||||| || || | Sbjct 337464 CCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCCTTATCTTGTATTTTGCCT 337523 Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| || || || || | || | | || ||| || || ||||| || ||||| Sbjct 337524 TTTACATTCTCTATTGTGTCGGATGGTTCTACTTCCAA-AGTGATGGTTTTGCCAGTGAG 337582 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||||||||||| Sbjct 337583 GGTCTTAACGAAAATTTG 337600 Score = 89.7 bits (98), Expect = 3e-12 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||| || | ||| || ||||| || ||||||||||| || ||||| || || | Sbjct 366184 CCAGCAAATATCAAACGCTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTATTTTGCCT 366243 Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||| || ||||||| || | | || ||| ||| || ||||| || || || Sbjct 366244 TTTACATTTTCTATTGTATCAGATGGTTCCACTTCCAA-GGTGATGGTTTTCCCAGTAAG 366302 Query 480752 AGTCTTAACGAAAATTTG 480769 || |||||||||||||| Sbjct 366303 CGTTTTAACGAAAATTTG 366320 Score = 89.7 bits (98), Expect = 3e-12 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||| || | ||| || ||||| || ||||||||||| || ||||| || || | Sbjct 366471 CCAGCAAATATCAAACGCTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTATTTTGCCT 366530 Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| |||||| ||||| | || | | || ||| || || || || || || || Sbjct 366531 TTTACATTTTCAATTGTATCGGATGGTTCCACTTCCAA-AGTGATGGTCTTGCCAGTAAG 366589 Query 480752 AGTCTTAACGAAAATTTG 480769 |||||||||||||||||| Sbjct 366590 AGTCTTAACGAAAATTTG 366607 Score = 86.0 bits (94), Expect = 4e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||||||||| || |||||||| ||||| || ||||| |||||||||||||| | Sbjct 339226 CCAGCAAAAATAAGCCGCTGTTGATCTGGAGGGATGCCTTCTTTGTCTTGAATCTTACTT 339285 Query 480693 TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGA 480752 || || ||||| ||||| | | | ||| || ||||| ||||| || || | Sbjct 339286 TTTACGTTCTCAATTGTATCTGACGGCTCAACTTCTAGTGTAATCGTTTTTCCTGTCAAC 339345 Query 480753 GTCTTAACGAAAATTTG 480769 ||||| || || || || Sbjct 339346 GTCTTCACAAATATCTG 339362 Score = 86.0 bits (94), Expect = 4e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||||||||| || |||||||| ||||| || ||||| |||||||||||||| | Sbjct 367669 CCAGCAAAAATAAGTCGCTGTTGATCTGGAGGGATGCCTTCTTTGTCTTGAATCTTACTT 367728 Query 480693 TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGA 480752 || || ||||| ||||| | | | ||| || ||||| ||||| || || | Sbjct 367729 TTTACGTTCTCAATTGTATCTGACGGCTCAACTTCTAGTGTAATCGTTTTTCCTGTCAAC 367788 Query 480753 GTCTTAACGAAAATTTG 480769 ||||| || || || || Sbjct 367789 GTCTTCACAAATATCTG 367805 >seq1033 Length=69817 Score = 113 bits (124), Expect = 3e-19 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 474638 GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAA 474697 ||||||| ||| || | || ||| ||||||| | |||||||| ||||||||| Sbjct 53071 GGTGAAAAGAAATTGTTCACTCCCGAAGAAATTTCAGCGATGGTTTTGTTGAAAATGAAA 53012 Query 474698 CAAACCGCG--AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAG 474755 ||| || |||| ||| | || ||||||| | |||| || | || ||||| | Sbjct 53011 GAAATTGCCGAAGCT--TATTTGGGCAAAGAAGTGAAAAATGCCGTCGTCACGGTTCCTG 52954 Query 474756 CATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTA 474815 | ||||| || ||| | ||||||||||| || ||||||||||| | ||||| ||||||| Sbjct 52953 CTTATTTCAACGATGCACAACGTCAAGCTACCAAAGATGCGGGCACCATTGCTGGTCTTA 52894 Query 474816 ATGTTTTACGTATTATTAATGAACC 474840 |||| | || || ||||| ||||| Sbjct 52893 ATGTAGTTCGAATCATTAACGAACC 52869 Score = 111 bits (122), Expect = 1e-18 Identities = 246/366 (67%), Gaps = 6/366 (2%) Strand=Plus/Minus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 |||||||| ||||||||||| || || ||||| || ||||| | | | || ||| || Sbjct 52103 AATCCTGACGAAGCTGTTGCCTACGGTGCTGCGGTACAAGCTGGCGTAATTTCTGGTGAA 52044 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 || ||| ||| | || |||| || | || || | ||| | | || || || Sbjct 52043 ---GA--AGATACTGG-TGATCTTGTGCTGTTGGATGTCAATCCGTTGACTTTGGGAATT 51990 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA 475972 ||||| || || || | ||||| || || ||| ||| ||||| | || ||| Sbjct 51989 GAAACTGTCGGCGGAGTGATGACGAAACTGATTCCCAGGAATACGGTAGTGCCGACCAAG 51930 Query 475973 AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032 ||||| | |||| ||| | | || ||||| | || || || || ||| | || Sbjct 51929 AAATCGCAGATATTCAGCACCGCTGCCGACAATCAGCCCACGGTTACTATTCAAGTTTTC 51870 Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092 ||||| ||| || | | || ||||| ||| || ||||| | || ||||| || Sbjct 51869 GAAGGCGAACGACCAATGACAAAAGACAATCACCTTCTTGGCAAGTTCGATCTTACTGGC 51810 Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152 || ||||| ||||| | || || || ||||||||||| || || |||||||||| ||| Sbjct 51809 ATACCTCCGGCTCCTCGCGGTGTGCCACAAATTGAAGTCACATTCGATATTGATGTGAAT 51750 Query 476153 GGTATT 476158 |||||| Sbjct 51749 GGTATT 51744 Score = 87.8 bits (96), Expect = 1e-11 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 290852 GGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAATCTAAAGTTGCC 290911 ||||| || || |||| | ||||| |||||| ||||| | ||| |||| || || Sbjct 52869 GGTTCGTTAATGATTCGAACTACATTAAGACCAGCAATGGTGCCCGCATCTTTGGTAGCT 52928 Query 290912 TGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCtttttccactttcttt 290971 || ||||| ||||| || ||||||||||| || || | || || |||| ||||| || Sbjct 52929 TGACGTTGTGCATCGTTGAAATAAGCAGGAACCGTGACGACGGCATTTTTCACTTCTTTG 52988 Query 290972 ttcaaataattttctgccatttgttttattt 291002 ||||||| ||| || |||| ||| |||| Sbjct 52989 CCCAAATAAGCTTCGGCAATTTCTTTCATTT 53019 >seq2020 Length=251690 Score = 100 bits (110), Expect = 2e-15 Identities = 166/235 (71%), Gaps = 5/235 (2%) Strand=Plus/Minus Query 296072 GAATTGGAAGATGGATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGG 296131 || |||| ||||||| ||| |||| ||||| |||||||| | || || ||| |||| Sbjct 52719 GACTTGGTCGATGGATAGATTTTAAAAATGATTATAAAACTTTATATTCAAGTTTCATGG 52660 Query 296132 AATCTGTTATTTGGTCATTTAAACAACTTTATGA-AAAGGAAATGATTTTTGAAGGTTAT 296190 ||||||| ||| ||| ||||| || ||| | ||||| || | | |||| Sbjct 52659 AATCTGTATGGTGGGTATTCAAACAGCTGTATAACAAAGGTCTTG-TCTACAGAGGTGTA 52601 Query 296191 AAAGTTATGCCTTATTCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAA 296250 ||||| ||||| | |||||||| |||| || ||||| || ||||||| | |||| Sbjct 52600 AAAGTGATGCCATTTTCTACTGCTTGCGGAACTCCATTGTCAAATTTTGAATCTGGACAA 52541 Query 296251 AATTATAAAGAGATTATTGATCCATCT-GTTACTTGTTGTTTTGAAATTATTTCT 296304 ||||| ||||| | |||||||| || |||| | || ||| || || ||||| Sbjct 52540 AATTACAAAGAAGTCATTGATCCTGCTAGTTAGTAATTCTTT--AATTTGTTTCT 52488 >seq285 Length=127634 Score = 95.1 bits (104), Expect = 8e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 299112 CTGAAGAAGAGATTAAAAAAGCTTATAAAAAATTAGCTATGAAATATCATCCTGACAGAA 299171 ||||||| || || |||||||||||| || | || |||||||||||||||||| | Sbjct 6338 CTGAAGATGAAATCAAAAAAGCTTATCGGAAGATGGCGTTGAAATATCATCCTGACAAGA 6397 Query 299172 ATAAAAGTCCTGAAGCGGAAGAAAAGTTTaaaaaaaTAAGTCATGCTTATAGTATTCTTT 299231 | ||||| ||||| || ||| || |||||| | || | || || | |||| Sbjct 6398 ACAAAAGCCCTGATGCAGAAAGCAAATTTAAAGAGATTGCAGAAGCATACGATGTTCTGA 6457 Query 299232 CAGATCCAACCAAAAAAGAAGTATATGATAAATTTGGAGAAGAAGGATTAAATTCAGGAA 299291 ||| | | || |||||| |||| ||||||||||| |||||||| || || || | Sbjct 6458 GTGATGCTAAAAAGAAAGAAATATACGATAAATTTGGTGAAGAAGGCTTGAAAGGTGGGA 6517 Query 299292 TGAGTGATGG 299301 ||| || ||| Sbjct 6518 TGAATGCTGG 6527 >seq1934 Length=792349 Score = 91.5 bits (100), Expect = 1e-12 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149 ||||| ||||| || || | |||||||| ||||| |||||| ||||||||||||||||| Sbjct 485852 GGTATACCTCCGGCCCCTCGTGGAGTTCCACAAATAGAAGTTGCTTTTGATATTGATGCA 485911 Query 476150 AATGGTATTCTTAATGTTACTGCTTGTGAT 476179 |||||||| || |||| | |||| | ||| Sbjct 485912 AATGGTATAGTTCATGTCAGTGCTCGAGAT 485941 >seq1852 Length=8990 Score = 86.0 bits (94), Expect = 4e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 480630 TTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTT 480689 || || ||||| || | | ||| |||||||||||||| |||||||| || ||||| || Sbjct 5805 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 5746 Query 480690 TGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTG 480749 ||||||| ||| || || || | || | ||| || || |||||||| || || Sbjct 5745 CTTTTGACATTTTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 5686 Query 480750 AGAGTCTTAACGAAAATTTG 480769 |||||||| ||||| || || Sbjct 5685 AGAGTCTTCACGAATATCTG 5666 >seq833 Length=82521 Score = 86.0 bits (94), Expect = 4e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 480630 TTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTT 480689 || || ||||| || | | ||| |||||||||||||| |||||||| || ||||| || Sbjct 79955 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 79896 Query 480690 TGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTG 480749 ||||||| ||| || || || | || | ||| || || |||||||| || || Sbjct 79895 CTTTTGACATTTTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 79836 Query 480750 AGAGTCTTAACGAAAATTTG 480769 |||||||| ||||| || || Sbjct 79835 AGAGTCTTCACGAATATCTG 79816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268070161286216