Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20papuae_20[genbank_20GCA_5F001447755.1_202015-11-24] 2,542 sequences; 46,844,510 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq147 82.4 7e-11 >seq147 Length=144011 Score = 82.4 bits (90), Expect = 7e-11 Identities = 103/139 (74%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 146899 ACTTGAAACTCGCCCGCCAGCACACGTCTGAG-ATACACATTGCTAGTGAAAGGCTCAAA 146957 |||||||| || |||| |||||||| | ||| ||| ||||| ||| | | || | Sbjct 32371 ACTTGAAATTCTCCCGATAGCACACGAC-GAGTATAGACATTCGACGTGTACGCTTCTAC 32313 Query 146958 AGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAACAA 147017 || ||||| ||||| || ||||| || || | ||| || ||||| |||| |||||| Sbjct 32312 TGATTCATTGTTGCCCAAAATTTGCGCTGTCGATGCAGTCGGCATTGGTGCCAACAACAA 32253 Query 147018 TGAATTTCGCAGACCGTAC 147036 |||||||||||||| ||| Sbjct 32252 CGAATTTCGCAGACCATAC 32234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476596055679120