Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20papuae_20[genbank_20GCA_5F001447755.1_202015-11-24] 2,542 sequences; 46,844,510 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2463 87.8 6e-12 >seq2463 Length=168562 Score = 87.8 bits (96), Expect = 6e-12 Identities = 86/110 (78%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 443730 GTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGG 443789 || ||||| | || ||| ||||||||| || || || ||||||||||||||||| || Sbjct 99996 GTTGAAGGTATTTTCTTTTCCGGCAGCTTC-GCGTCAATTTTCTGGTTGAAAAAGCGAGG 100054 Query 443790 ACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGG 443839 || |||| |||| ||||||| || ||||| ||||| ||| ||||||| Sbjct 100055 CCTGATGCCCGGTTTGACCTTCAGCAACGAGTTGATCTCTCGTGACGAGG 100104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588284268889190