Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20pseudospiralis_20[genbank_20GCA_5F001447645.1_202015- 11-24] 6,594 sequences; 49,152,658 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq20 82.4 5e-11 >seq20 Length=498608 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | |||||| || ||||| || || ||||||||||| || ||||| |||||||| Sbjct 300198 CCACCACGCAAACGCAAAACCAAGTGAAGCGTGCTCTCTTTCTGAATGTTATAATCGGAC 300257 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 | || ||| |||| ||||| ||||| || | ||| Sbjct 300258 AAAGTACGTCCGTCTTCCAACTGTTTGCCTGAAAA 300292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328677583908480