Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20sp._20T6_20[genbank_20GCA_5F001447435.1_202015-11-24] 5,951 sequences; 50,853,738 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq117 129 1e-24 seq332 116 7e-21 seq326 116 7e-21 seq1863 105 1e-17 seq5215 102 2e-16 seq2524 100 6e-16 >seq117 Length=123509 Score = 129 bits (142), Expect = 1e-24 Identities = 115/144 (80%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 ||||||||||| || |||| || ||||||||||| || ||||| |||||||| |||||| Sbjct 9014 TTACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTA 9073 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 |||||||||| || | ||| || | |||||||| | || || ||||| |||||| Sbjct 9074 CTTTTTACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTT 9133 Query 192514 AATGTTTTAATAAATATCTGCATT 192537 |||||||| | ||| ||||||||| Sbjct 9134 AATGTTTTCACAAAAATCTGCATT 9157 Score = 127 bits (140), Expect = 4e-24 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || |||| || ||||||||||| || ||||| |||||||| |||||| Sbjct 8728 TACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTAC 8787 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 |||||||||| || | ||| || | |||||||| | || || ||||| ||||||| Sbjct 8788 TTTTTACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTA 8847 Query 192515 ATGTTTTAATAAATATCTGCATT 192537 ||||||| | ||| ||||||||| Sbjct 8848 ATGTTTTCACAAAAATCTGCATT 8870 Score = 127 bits (140), Expect = 4e-24 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 ||||||||||| || |||| || ||||||||||| || ||||| |||||||| |||||| Sbjct 9301 TTACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTA 9360 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 |||| ||||| || | |||||| | |||||||| | || || ||||| |||||| Sbjct 9361 CTTTTCACATTTTCAATCGTATCTGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTT 9420 Query 192514 AATGTTTTAATAAATATCTGCAT 192536 |||||||| | ||| |||||||| Sbjct 9421 AATGTTTTCACAAAAATCTGCAT 9443 Score = 125 bits (138), Expect = 1e-23 Identities = 113/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || |||| || ||||||||||| || ||||| |||||||| |||||| Sbjct 9588 TACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTAC 9647 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 |||| ||||| || | |||||| | |||||||| | || || ||||| ||||||| Sbjct 9648 TTTTCACATTTTCAATCGTATCTGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTA 9707 Query 192515 ATGTTTTAATAAATATCTGCAT 192536 ||||||| | ||| |||||||| Sbjct 9708 ATGTTTTCACAAAAATCTGCAT 9729 Score = 118 bits (130), Expect = 2e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 ||||| |||||||||||||| || |||||||| || || ||||| ||||| || |||||| Sbjct 10269 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 10328 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 |||| ||||| || | ||||| | ||| |||||||| || || ||||| ||||| Sbjct 10329 CTTTTAACATTTTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 10388 Query 192514 AATGTTTTAATAAATATCTGCAT 192536 | ||| || | ||||||||||| Sbjct 10389 AGTGTCTTCACGAATATCTGCAT 10411 >seq332 Length=28044 Score = 116 bits (128), Expect = 7e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || | | ||||||||| ||||| || |||||||| ||||| || || Sbjct 1112 TACCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCTTGAATCTTGC 1171 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 |||||||||| || | |||||||| || ||||| || ||||| ||||| || || | Sbjct 1172 TTTTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCA 1231 Query 192515 ATGTTTTAATAAATATCTGCAT 192536 | ||||| | |||||||||||| Sbjct 1232 ACGTTTTCACAAATATCTGCAT 1253 Score = 114 bits (126), Expect = 3e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 192387 CAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTG 192446 ||||| ||||||||||| || || | ||||||||| ||||| |||||||| ||||| || Sbjct 27210 CAATTACTTACCAGCAAAAATCAAACGCTGTTGATCCGGTGGAATTCCTTCCTTATCCTG 27269 Query 192447 TATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTT 192506 |||||| ||||||||| ||| | ||| || | ||||||||| | || || ||||| Sbjct 27270 TATTTTCCCTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTT 27329 Query 192507 ACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || | || |||| ||| || |||||| Sbjct 27330 GCCGGTAAGAGTCTTAACAAAAATTTGCATT 27360 Score = 113 bits (124), Expect = 9e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 || || ||||||||||| || || | |||||||| || || ||||| |||||||||||| Sbjct 27769 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGAGGAATTCCCTCTTTATCTTGT 27828 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 ||||| ||| ||||| ||| | ||| || | ||||||||| | || |||||||| Sbjct 27829 ATTTTTCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAACGTGATGGTTTTC 27888 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| | || |||| ||| || |||||| Sbjct 27889 CCAGTAAGAGTCTTAACAAAAATTTGCATT 27918 Score = 109 bits (120), Expect = 1e-18 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 ||||||||||| || | | |||||||| ||||| ||||| |||||||| || |||||| Sbjct 1443 TTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 1502 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 || ||||| | | ||||| | ||| ||||| |||||||||||||| || || Sbjct 1503 CCCTTCACATTTTCAACTGTGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCCGGTC 1562 Query 192514 AATGTTTTAATAAATATCTGCATTT 192538 | ||||| | |||||||||||||| Sbjct 1563 AGAGTTTTGACAAATATCTGCATTT 1587 Score = 109 bits (120), Expect = 1e-18 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 ||||||||||| || | | |||||||| ||||| ||||| |||||||| || |||||| Sbjct 17800 TTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 17859 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 || ||||| | | ||||| | ||| ||||| |||||||||||||| || || Sbjct 17860 CCCTTCACATTTTCAACTGTGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCCGGTC 17919 Query 192514 AATGTTTTAATAAATATCTGCATTT 192538 | ||||| | |||||||||||||| Sbjct 17920 AGAGTTTTGACAAATATCTGCATTT 17944 Score = 109 bits (120), Expect = 1e-18 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 || || ||||||||||| || || | |||||||| ||||| |||||||| ||||| ||| Sbjct 27490 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGT 27549 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 ||||| ||||||||| ||| | ||| || | ||||||||| | || || ||||| Sbjct 27550 ATTTTCCCTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTG 27609 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || | || |||| ||| || |||||| Sbjct 27610 CCGGTAAGAGTCTTAACAAAAATTTGCATT 27639 Score = 105 bits (116), Expect = 1e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || | | || ||||| ||||| ||||||||||||||||| ||||| Sbjct 195 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGC 254 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||||||||| ||| | ||| || | ||||||||||| || || ||||| || || | Sbjct 255 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTAA 314 Query 192515 ATGTTTTAATAAATATCTGCATT 192537 || |||| ||| || |||||| Sbjct 315 GAGTCTTAACAAAAATTTGCATT 337 Score = 105 bits (116), Expect = 1e-17 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 192387 CAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTG 192446 ||||| ||||||||||| || || | || ||||| ||||| |||||||| ||||| || Sbjct 26647 CAATTACTTACCAGCAAAAATCAAACGTTGCTGATCCGGTGGAATTCCTTCCTTATCCTG 26706 Query 192447 TATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTT 192506 |||||| ||||||||| ||| | ||| || | ||||||||| | || || ||||| Sbjct 26707 TATTTTCCCTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTT 26766 Query 192507 ACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || | || |||| ||| || |||||| Sbjct 26767 GCCGGTAAGAGTCTTAACAAAAATTTGCATT 26797 Score = 100 bits (110), Expect = 6e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || | | || ||||| ||||| ||||||||||||||||| ||||| Sbjct 478 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGC 537 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||||||||| ||| | ||| || | ||||||||| | || || ||||| || || | Sbjct 538 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTAA 597 Query 192515 ATGTTTTAATAAATATCTGCATT 192537 || |||| ||| || |||||| Sbjct 598 GAGTCTTAACAAAAATTTGCATT 620 Score = 100 bits (110), Expect = 6e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || || | || ||||| ||||| ||||| |||||||| |||||||| Sbjct 26373 TACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATTCCCTCTTTATCCTGTATTTTGC 26432 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||||||||| ||| | ||| || | ||||||||||| || || ||||| || || | Sbjct 26433 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTAA 26492 Query 192515 ATGTTTTAATAAATATCTGCATT 192537 || |||| || || |||||| Sbjct 26493 GAGTCTTAACGAAAATTTGCATT 26515 Score = 96.9 bits (106), Expect = 7e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || | | || ||||| ||||| |||||||| ||||| |||||||| Sbjct 26938 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTGC 26997 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||||||||| ||| | ||| || | ||||||||||| || || ||||| || || | Sbjct 26998 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTAA 27057 Query 192515 ATGTTTTAATAAATATCTGCATT 192537 || |||| || || |||||| Sbjct 27058 GAGTCTTAACGAAAATTTGCATT 27080 >seq326 Length=30629 Score = 116 bits (128), Expect = 7e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || | | ||||||||| ||||| || |||||||| ||||| || || Sbjct 19435 TACCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCTTGAATCTTGC 19494 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 |||||||||| || | |||||||| || ||||| || ||||| ||||| || || | Sbjct 19495 TTTTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCA 19554 Query 192515 ATGTTTTAATAAATATCTGCAT 192536 | ||||| | |||||||||||| Sbjct 19555 ACGTTTTCACAAATATCTGCAT 19576 Score = 114 bits (126), Expect = 3e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 192387 CAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTG 192446 ||||| ||||||||||| || || | |||||||| ||||| |||||||| ||||| || Sbjct 18230 CAATTACTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTG 18289 Query 192447 TATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTT 192506 |||||| ||||||||| ||| | ||| || | ||||||||| | || || ||||| Sbjct 18290 TATTTTCCCTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTT 18349 Query 192507 ACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || | || |||| ||| ||||||||| Sbjct 18350 GCCGGTAAGAGTCTTAACAAAAATCTGCATT 18380 Score = 114 bits (126), Expect = 3e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 ||||||||||| || | | |||||||| ||||| ||||| |||||||| || |||||| Sbjct 19766 TTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 19825 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 || ||||| || | || || | ||| ||||| |||||||||||||| ||||| Sbjct 19826 CCCTTCACATTTTCAATTGTGTCAGAGGGTTCCACTTCCAGAGTAATGGTTTTCCCAGTC 19885 Query 192514 AATGTTTTAATAAATATCTGCATTTT 192539 | ||||| | ||||||||||||||| Sbjct 19886 AGAGTTTTCACAAATATCTGCATTTT 19911 Score = 105 bits (116), Expect = 1e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || | | || ||||| ||||| ||||||||||||||||| ||||| Sbjct 18521 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGC 18580 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||||||||| ||| | ||| || | ||||||||| | || |||||||| || || | Sbjct 18581 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAATGTGATGGTTTTGCCGGTGA 18640 Query 192515 ATGTTTTAATAAATATCTGCATT 192537 || |||| ||| || |||||| Sbjct 18641 GAGTCTTAACAAAAATTTGCATT 18663 Score = 96.9 bits (106), Expect = 7e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || | | || ||||| ||||| ||||||||||||||||| ||||| Sbjct 17676 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGC 17735 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||||||||| ||| | ||| || | ||||||||| | || || ||||| || || | Sbjct 17736 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTAA 17795 Query 192515 ATGTTTTAATAAATATCTGCATT 192537 || |||| || || |||||| Sbjct 17796 GAGTCTTAACGAAAATTTGCATT 17818 >seq1863 Length=625 Score = 105 bits (116), Expect = 1e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || | | || ||||| ||||| ||||||||||||||||| ||||| Sbjct 431 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGC 372 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||||||||| ||| | ||| || | ||||||||||| || || ||||| || || | Sbjct 371 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTAA 312 Query 192515 ATGTTTTAATAAATATCTGCATT 192537 || |||| ||| || |||||| Sbjct 311 GAGTCTTAACAAAAATTTGCATT 289 Score = 96.9 bits (106), Expect = 7e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || | | || ||||| ||||| ||||||||||||||||| ||||| Sbjct 148 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGC 89 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||||||||| ||| | ||| || | |||||||| | || || ||||| || || | Sbjct 88 CTTTTACATTTTCTATTGTATCAGATGGCTCTACTTCCAAGGTGATCGTTTTGCCGGTAA 29 Query 192515 ATGTTTTAATAAATATCTGCATT 192537 || |||| ||| || |||||| Sbjct 28 GAGTCTTAACAAAAATTTGCATT 6 >seq5215 Length=241 Score = 102 bits (112), Expect = 2e-16 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 192387 CAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTG 192446 ||||| ||||||||||| || || | |||||||| || || ||||| ||||||||||| Sbjct 86 CAATTACTTACCAGCAAAAATCAAACGTTGTTGATCCGGAGGAATTCCCTCTTTATCTTG 145 Query 192447 TATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTT 192506 |||||| ||| ||||| ||| | ||| || | |||||||| | || || ||||| Sbjct 146 TATTTTTCCTTTCACATTTTCTATTGTATCAGATGGCTCTACTTCCAAGGTGATCGTTTT 205 Query 192507 ACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || | || |||| ||| || |||||| Sbjct 206 GCCGGTAAGAGTCTTAACAAAAATTTGCATT 236 >seq2524 Length=468 Score = 100 bits (110), Expect = 6e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || | | || ||||| ||||| ||||||||||||||||| ||||| Sbjct 231 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGC 290 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||||||||| ||| | ||| || | ||||||||| | || || ||||| || || | Sbjct 291 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTAA 350 Query 192515 ATGTTTTAATAAATATCTGCATT 192537 || |||| ||| || |||||| Sbjct 351 GAGTCTTAACAAAAATTTGCATT 373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984404936168850