Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20sp._20T8_20[genbank_20GCA_5F001447745.1_202015-11-24] 4,124 sequences; 49,331,761 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3681 109 5e-19 seq2781 107 2e-18 seq2423 107 2e-18 seq1681 105 6e-18 seq3029 104 2e-17 seq1493 100 2e-16 seq3708 98.7 8e-16 seq2639 96.9 3e-15 seq1996 95.1 1e-14 seq99 95.1 1e-14 seq266 91.5 1e-13 seq929 84.2 2e-11 >seq3681 Length=661693 Score = 109 bits (120), Expect = 5e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| ||| | ||||| |||||| |||| | ||||| ||| | | Sbjct 10035 ATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 10094 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||||| || || || |||||||| ||||| Sbjct 10095 GATACAATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAG 10154 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||||| || ||||| || Sbjct 10155 CAACGTCTGATTTTTGCTGG 10174 Score = 109 bits (120), Expect = 5e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || |||| || ||||| |||| | ||||||||| | | Sbjct 19533 ATGCAAATTTTTGTTAAGACCCTAACTGGGAAAACCATCACGTTGGAAGTGGAACCATCT 19592 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| || || || | ||| || |||||||| |||||||| ||||| || |||||| Sbjct 19593 GATACTGTTGAGAATGTGAAAGGGAAGATTCAAGATAAGGAGGGAATTCCTCCAGATCAA 19652 Query 22339 CAACGTCTTATATTTGCCGG 22358 || ||||| || ||||| || Sbjct 19653 CAGCGTCTGATTTTTGCTGG 19672 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| ||| | ||||| |||||| |||| | ||||| ||| | | Sbjct 10318 ATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATCT 10377 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || ||||| || |||||||| |||||| Sbjct 10378 GATACAATAGAGAATGTAAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 10437 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 |||||| | || ||||| || || Sbjct 10438 CAACGTTTGATTTTTGCTGGTAA 10460 Score = 105 bits (116), Expect = 6e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| |||||| | || || ||||| | ||||| ||||||||| || Sbjct 18002 AAAATGCAGATATTTGTGAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCC 18061 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || || | || |||||||| || || ||||| |||||||||||| Sbjct 18062 TCTGACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGAT 18121 Query 22336 CAACAACGTCTTATATTTGCCGGCAA 22361 ||||||||||| || ||||| || || Sbjct 18122 CAACAACGTCTGATTTTTGCTGGTAA 18147 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| ||| | ||||| |||||| |||| | ||||| ||| | | Sbjct 19250 ATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 19309 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || ||||| || |||||||| ||||| Sbjct 19310 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCAGATCAG 19369 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||||| || ||||| || Sbjct 19370 CAACGTCTGATTTTTGCTGG 19389 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| ||||| || || || |||||| | || |||||||| || | | Sbjct 18336 GATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTC 18395 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | || || | ||| || ||||||||||| || || |||||||| ||||| Sbjct 18396 AGATACAATTGAAAATGTAAAAAGCAAGATTCAAGACAAAGAAGGCATTCCACCGGATCA 18455 Query 22338 ACAACGTCTTATATTTGCCGG 22358 ||| || ||||| ||||| || Sbjct 18456 ACAGCGGCTTATTTTTGCTGG 18476 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/150 (73%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | || || ||||| | ||| | ||||| ||| | | Sbjct 18970 ATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATCT 19029 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || ||||| || |||||||| |||||| Sbjct 19030 GATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 19089 Query 22339 CAACGTCTTATATTTGCCGG-CAAACAGTT 22367 |||||| | || ||||| || || ||||| Sbjct 19090 CAACGTTTGATTTTTGCTGGTGAAGCAGTT 19119 >seq2781 Length=253 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | || || ||||| | ||| | ||||| ||| | | Sbjct 40 ATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATCT 99 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| |||||||||||| || ||||| |||||||| |||||| Sbjct 100 GATACAATAGAAAATGTGAAAGGAAAAATTCAAGATAAAGAGGGAATTCCACCGGATCAA 159 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTT 22367 |||||| | || ||||| || || ||||| Sbjct 160 CAACGTTTGATTTTTGCTGGTAAGCAGTT 188 >seq2423 Length=9717 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | || || ||||| | ||| | ||||| ||| | | Sbjct 2466 ATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATCT 2407 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| |||||||||||| || ||||| |||||||| |||||| Sbjct 2406 GATACAATAGAAAATGTGAAAGGAAAAATTCAAGATAAAGAGGGAATTCCACCGGATCAA 2347 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTT 22367 |||||| | || ||||| || || ||||| Sbjct 2346 CAACGTTTGATTTTTGCTGGTAAGCAGTT 2318 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| |||||| | || || ||||| | ||||| ||||||||| || | Sbjct 3611 ATGCAGATATTTGTCAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCCTCT 3552 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || |||||||| || || ||||| ||||||||||||||| Sbjct 3551 GACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCAA 3492 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 |||||||| || ||||| || || Sbjct 3491 CAACGTCTGATTTTTGCTGGTAA 3469 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| ||||| || || || |||||| | || |||||||| || | | Sbjct 3280 GATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTC 3221 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | || || | ||| || ||||||||||| || || || ||||| ||||| Sbjct 3220 AGATACAATTGAAAATGTAAAAAGCAAGATTCAAGACAAAGAAGGCATCCCACCAGATCA 3161 Query 22338 ACAACGTCTTATATTTGCCGG 22358 ||| || ||||| ||||| || Sbjct 3160 ACAGCGGCTTATTTTTGCTGG 3140 >seq1681 Length=34527 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| ||| | ||||| |||||| |||| | ||||| ||| | | Sbjct 29984 ATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATCT 30043 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || ||||| || |||||||| |||||| Sbjct 30044 GATACAATAGAGAATGTAAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 30103 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 |||||| | || ||||| || || Sbjct 30104 CAACGTTTGATTTTTGCTGGTAA 30126 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| ||| | ||||| |||||| |||| | ||||| ||| | | Sbjct 29701 ATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 29760 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| || |||||||| || || || |||||||| ||||| Sbjct 29761 GATACAATAGAGAATGTAAAAGGCAAGATTCAAGATAAAGAAGGAATTCCACCAGATCAG 29820 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||||| || ||||| || Sbjct 29821 CAACGTCTGATTTTTGCTGG 29840 >seq3029 Length=236 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| ||| | ||||| |||||| |||| | ||||| ||| | | Sbjct 7 ATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATCT 66 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || ||||| || |||||||| ||||| Sbjct 67 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCAGATCAG 126 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||||| || ||||| || Sbjct 127 CAACGTCTGATTTTTGCTGG 146 >seq1493 Length=366 Score = 100 bits (110), Expect = 2e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| ||| ||||||| ||||| |||| | ||||| ||| | | Sbjct 239 ATGCAAATTTTCGTTAAGACTCTAACCGGCAAAACCATCACCTTAGAAGTAGAACCATCT 298 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||||| || || || |||||||| |||||| Sbjct 299 GATACAATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCGGATCAA 358 Query 22339 CAACGTCT 22346 |||||||| Sbjct 359 CAACGTCT 366 >seq3708 Length=1771 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 22225 ATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACC 22284 ||||||||||| ||| | ||||| |||||| |||| | ||||| ||| | | ||||| Sbjct 1771 ATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCTGATACA 1712 Query 22285 GTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGT 22344 | || || | ||| ||||||||||| || || || |||||||| ||||| |||||| Sbjct 1711 ATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAGCAACGT 1652 Query 22345 CTTATATTTGCCGG 22358 || || ||||| || Sbjct 1651 CTGATTTTTGCTGG 1638 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| ||| | ||||| |||||| |||| | ||||| ||| | | Sbjct 1494 ATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATCT 1435 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || ||||| || |||||||| ||||| Sbjct 1434 GATACAATAGAGAATGTAAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCAG 1375 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 |||||| | || || || || || Sbjct 1374 CAACGTTTGATTTTCGCTGGTAA 1352 >seq2639 Length=264 Score = 96.9 bits (106), Expect = 3e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | ||||| |||||| |||| | ||||| ||| | | Sbjct 137 ATGCAAATTTTCGTTAAGACCCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATCT 196 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||||| || || || |||||||| |||||| Sbjct 197 GATACAATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCGGATCAA 256 Query 22339 CAACGTCT 22346 |||||||| Sbjct 257 CAACGTCT 264 >seq1996 Length=320 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 22225 ATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACC 22284 ||||||||||| ||| | ||||| |||||| |||| | ||||| ||| | | ||||| Sbjct 320 ATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCTGATACA 261 Query 22285 GTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGT 22344 | || || | ||| ||||| || || ||||| || |||||||| |||||||||||| Sbjct 260 ATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCGGATCAACAACGT 201 Query 22345 CTTATATTTGCCGGCAA 22361 | || ||||| || || Sbjct 200 TTGATTTTTGCTGGTAA 184 >seq99 Length=156819 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| ||||| || ||||| |||| | ||||| || | | Sbjct 39968 ATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCATCT 39909 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||||| ||||| || |||||||| ||||| Sbjct 39908 GATACGATTGAAAATGTAAAAAGTAAAATTCAAGATAAGGAAGGCATTCCACCTGATCAG 39849 Query 22339 CAACGTCTTATATTTGCCGG 22358 ||||| | |||||||| || Sbjct 39848 CAACGATTGATATTTGCTGG 39829 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| ||||| || ||||| |||| | ||||| || | | Sbjct 40254 ATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCATCA 40195 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||||| ||||| || ||||| || ||||| Sbjct 40194 GATACGATTGAAAATGTGAAAAGTAAAATTCAAGATAAGGAAGGCATTCCGCCTGATCAG 40135 Query 22339 CAACGTCTTATATTTGCCGG 22358 ||||| | |||||||| || Sbjct 40134 CAACGATTGATATTTGCTGG 40115 >seq266 Length=548 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| ||||| || ||||| |||| | ||||| || | | Sbjct 345 ATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCATCA 286 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||||| ||||| || ||||| || ||||| Sbjct 285 GATACGATTGAAAATGTGAAAAGTAAAATTCAAGATAAGGAAGGCATTCCGCCTGATCAG 226 Query 22339 CAACGTCTTATATTTGCCGG 22358 ||||| | |||||||| || Sbjct 225 CAACGATTGATATTTGCTGG 206 >seq929 Length=70851 Score = 84.2 bits (92), Expect = 2e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 129977 ATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAAT 130036 ||||| | || ||||||| ||| ||| || ||||| | || ||||| || | || Sbjct 57549 ATTCATGAGGGCACATCAGTGACCAATCTCCGTCGGCTTCAATGCGCTTCATGAATAGAT 57608 Query 130037 CGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTAC 130096 | |||| ||| ||||| || ||||||||||| ||| | || ||| | || |||| Sbjct 57609 CAGGTATCCAGAGGGCATAAAACAAATCTCGGGCTCGGTTTTCTTCGACGCCTGTGTTCT 57668 Query 130097 GTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATA 130145 |||| ||||| ||||| | ||||| |||||||| ||||| | ||| Sbjct 57669 TTTTCGCGTCAAGAAAATCAAATATGTCTGCGTGCCAAGGTTCCAAATA 57717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419706903946060