Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20sp._20T8_20[genbank_20GCA_5F001447745.1_202015-11-24] 4,124 sequences; 49,331,761 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3725 150 7e-31 seq3681 122 3e-22 seq2781 122 3e-22 seq2423 122 3e-22 seq529 122 3e-22 seq99 120 1e-21 seq1681 100 1e-15 seq266 100 1e-15 seq3708 98.7 4e-15 seq2639 98.7 4e-15 seq1493 98.7 4e-15 seq1996 96.9 1e-14 seq3029 91.5 6e-13 >seq3725 Length=229766 Score = 150 bits (166), Expect = 7e-31 Identities = 271/393 (69%), Gaps = 5/393 (1%) Strand=Plus/Plus Query 451205 ATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATG 451264 |||||||| | || ||||| || | || | ||| | || |||||||| ||||| Sbjct 192006 ATTCAAGTCGAATACAAAGGCGAGTCGAAGTCATTTACACCAGAAGAAATCAGTGCTATG 192065 Query 451265 GTTCTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGC 451323 || ||| | || ||||| ||||| || ||| ||| | || | |||| ||||| Sbjct 192066 GTG-TTAGTGAAGATGAAGGAAACTGCCGAAGCTTATTTGGGAAAAACTGTTAAGGATGC 192124 Query 451324 AGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGG 451383 |||||||||||||| || ||||| || ||| | || || || || || ||||| || || Sbjct 192125 CGTAATTACTGTTCCGGCATATTTTAACGATTCTCAGCGTCAGGCGACCAAAGACGCTGG 192184 Query 451384 ACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGC 451443 | ||| ||||||| |||||| | || || || || ||||| ||||| ||||| | || Sbjct 192185 AACGATTTCTGGTTTGAATGTTTTGCGTATCATCAACGAACCAACAGCGGCTGCAATTGC 192244 Query 451444 ATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGG 451503 |||||||| | | ||| | | ||| |||| || | ||||||| |||| Sbjct 192245 TTATGGACTTG---ATAGAAAGGGTGGCGGTGAACGAAATGTTCTGATATTTGACCTTGG 192301 Query 451504 TGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGC 451563 ||| || ||| |||| ||| | | | || |||||||| | ||||| || ||| | Sbjct 192302 TGGTGGTACTTTTGATGTGTCTATTTTGACCATCGAAGATGGCATTTTTGAGGTCAAGTC 192361 Query 451564 AACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 ||| |||||| |||||| | || ||||| || Sbjct 192362 TACCGCTGGTGACACTCATTTGGGTGGTGAGGA 192394 >seq3681 Length=661693 Score = 122 bits (134), Expect = 3e-22 Identities = 108/135 (80%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||||||||| || || ||||| ||||| || ||| | || || ||| |||| Sbjct 18969 AATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATC 19028 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| |||||| | | ||| ||||| || ||||||||||||||||| || ||||| Sbjct 19029 TGATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCA 19088 Query 391169 ACAACGTTTAATTTT 391183 ||||||||| ||||| Sbjct 19089 ACAACGTTTGATTTT 19103 Score = 104 bits (114), Expect = 9e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| |||||||| ||||| |||||||| || || ||| | || Sbjct 18004 AATGCAGATATTTGTGAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCCTC 18063 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||| | | || |||||||| ||||| || |||||||| || ||||| Sbjct 18064 TGACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCA 18123 Query 391169 ACAACGTTTAATTTT 391183 ||||||| | ||||| Sbjct 18124 ACAACGTCTGATTTT 18138 Score = 100 bits (110), Expect = 1e-15 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| ||||| || || || || ||||| || || | || || ||| |||| Sbjct 10317 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATC 10376 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || || | | ||| ||||| || ||||||||||||||||| || ||||| Sbjct 10377 TGATACAATAGAGAATGTAAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCA 10436 Query 391169 ACAACGTTTAATTTT 391183 ||||||||| ||||| Sbjct 10437 ACAACGTTTGATTTT 10451 Score = 100 bits (110), Expect = 1e-15 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| ||||| || || ||||| ||||| || || | || || ||| |||| Sbjct 19532 AATGCAAATTTTTGTTAAGACCCTAACTGGGAAAACCATCACGTTGGAAGTGGAACCATC 19591 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| |||| | | ||| || |||||||||||||| ||||||||||| ||||| Sbjct 19592 TGATACTGTTGAGAATGTGAAAGGGAAGATTCAAGATAAGGAGGGAATTCCTCCAGATCA 19651 Query 391169 ACAACGTTTAATTTT 391183 ||| ||| | ||||| Sbjct 19652 ACAGCGTCTGATTTT 19666 Score = 95.1 bits (104), Expect = 5e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| ||||| || || || || ||||| || || | || || ||| |||| Sbjct 10034 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATC 10093 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || || | | ||| |||||||||||||| ||||||||||| || ||||| Sbjct 10094 TGATACAATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCAGATCA 10153 Query 391169 ACAACGTTTAATTTT 391183 |||||| | ||||| Sbjct 10154 GCAACGTCTGATTTT 10168 Score = 91.5 bits (100), Expect = 6e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| ||||| || || || || ||||| || || | || || ||| |||| Sbjct 19249 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATC 19308 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || || | | ||| ||||| || ||||||||||||||||| || ||||| Sbjct 19309 TGATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCAGATCA 19368 Query 391169 ACAACGTTTAATTTT 391183 |||||| | ||||| Sbjct 19369 GCAACGTCTGATTTT 19383 >seq2781 Length=253 Score = 122 bits (134), Expect = 3e-22 Identities = 108/135 (80%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||||||||| || || ||||| ||||| || ||| | || || ||| |||| Sbjct 39 AATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATC 98 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || ||| | | ||| ||||||||||||||| || |||||||| || ||||| Sbjct 99 TGATACAATAGAAAATGTGAAAGGAAAAATTCAAGATAAAGAGGGAATTCCACCGGATCA 158 Query 391169 ACAACGTTTAATTTT 391183 ||||||||| ||||| Sbjct 159 ACAACGTTTGATTTT 173 >seq2423 Length=9717 Score = 122 bits (134), Expect = 3e-22 Identities = 108/135 (80%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||||||||| || || ||||| ||||| || ||| | || || ||| |||| Sbjct 2467 AATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATC 2408 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || ||| | | ||| ||||||||||||||| || |||||||| || ||||| Sbjct 2407 TGATACAATAGAAAATGTGAAAGGAAAAATTCAAGATAAAGAGGGAATTCCACCGGATCA 2348 Query 391169 ACAACGTTTAATTTT 391183 ||||||||| ||||| Sbjct 2347 ACAACGTTTGATTTT 2333 Score = 104 bits (114), Expect = 9e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| |||||||| ||||| |||||||| || || ||| | || Sbjct 3612 AATGCAGATATTTGTCAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCCTC 3553 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||| | | || |||||||| ||||| || |||||||| || ||||| Sbjct 3552 TGACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCA 3493 Query 391169 ACAACGTTTAATTTT 391183 ||||||| | ||||| Sbjct 3492 ACAACGTCTGATTTT 3478 >seq529 Length=107346 Score = 122 bits (134), Expect = 3e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 451219 TAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAAT 451278 ||| ||||||| ||| || |||| |||||||||||| | |||||| | ||||| Sbjct 46218 TAACGGTGAAAAGAAATTGTTCACTCCCGAAGAAATTTCAGCGATGGTTTTGTTGAAAAT 46277 Query 451279 GAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCC 451338 |||||||| || || ||| | || ||| | |||| || | || ||||| Sbjct 46278 GAAAGAAATTGCCGAGGCTTATTTGGGCAAAGAAGTGAAAAATGCCGTCGTCACGGTTCC 46337 Query 451339 CGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTT 451398 ||||||||||| ||||||||||| ||||| || ||||||||||| ||||||||| | Sbjct 46338 AGCTTATTTCAACGATGCACAACGTCAAGCTACCAAAGATGCAGGCACCATTGCTGGTCT 46397 Query 451399 AAATGTTCTTCGAATTATTAATGAACC 451425 |||||| | ||||| || || ||||| Sbjct 46398 TAATGTTGTACGAATCATCAACGAACC 46424 >seq99 Length=156819 Score = 120 bits (132), Expect = 1e-21 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | || ||||| || ||||| ||||| |||||||| || || || |||||| || Sbjct 40939 ATTATGCAGATATTCGTGAAGACACTTACTGGAAAAACTATAACACTAGAAGTTGAACCA 40880 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 || || | ||| ||| | ||||| |||||||| ||||||||||| |||||||||||| Sbjct 40879 TCAGACACCATCGAAAATGTTAAAAGTAAAATTCAGGATAAGGAAGGCATTCCTCCTGAT 40820 Query 391167 CAACAACGTTTAATTTTCTCAGGGAA 391192 || ||| | ||||| || |||| || Sbjct 40819 CAGCAAAGATTAATCTTTGCAGGTAA 40794 Score = 104 bits (114), Expect = 9e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || |||||| | ||||| ||||| || || | || || || |||| Sbjct 39969 AATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCATC 39910 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| |||||| | | ||| |||||||||||||||||||| ||||| |||||||| Sbjct 39909 TGATACGATTGAAAATGTAAAAAGTAAAATTCAAGATAAGGAAGGCATTCCACCTGATCA 39850 Query 391169 ACAACGTTTAATTTT 391183 ||||| || || || Sbjct 39849 GCAACGATTGATATT 39835 Score = 98.7 bits (108), Expect = 4e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || |||||| | ||||| ||||| || || | || || || |||| Sbjct 40254 ATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCATCA 40195 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | ||| |||||||||||||||||||| ||||| |||||||| Sbjct 40194 GATACGATTGAAAATGTGAAAAGTAAAATTCAAGATAAGGAAGGCATTCCGCCTGATCAG 40135 Query 391170 CAACGTTTAATTTT 391183 ||||| || || || Sbjct 40134 CAACGATTGATATT 40121 >seq1681 Length=34527 Score = 100 bits (110), Expect = 1e-15 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| ||||| || || || || ||||| || || | || || ||| |||| Sbjct 29983 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATC 30042 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || || | | ||| ||||| || ||||||||||||||||| || ||||| Sbjct 30043 TGATACAATAGAGAATGTAAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCA 30102 Query 391169 ACAACGTTTAATTTT 391183 ||||||||| ||||| Sbjct 30103 ACAACGTTTGATTTT 30117 Score = 91.5 bits (100), Expect = 6e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| ||||| || || || || ||||| || || | || || ||| |||| Sbjct 29700 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATC 29759 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || || | | ||| || ||||||||||| ||||||||||| || ||||| Sbjct 29760 TGATACAATAGAGAATGTAAAAGGCAAGATTCAAGATAAAGAAGGAATTCCACCAGATCA 29819 Query 391169 ACAACGTTTAATTTT 391183 |||||| | ||||| Sbjct 29820 GCAACGTCTGATTTT 29834 >seq266 Length=548 Score = 100 bits (110), Expect = 1e-15 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || |||||| | ||||| ||||| || || | || || || |||| Sbjct 346 AATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCATC 287 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| |||||| | | ||| |||||||||||||||||||| ||||| |||||||| Sbjct 286 AGATACGATTGAAAATGTGAAAAGTAAAATTCAAGATAAGGAAGGCATTCCGCCTGATCA 227 Query 391169 ACAACGTTTAATTTT 391183 ||||| || || || Sbjct 226 GCAACGATTGATATT 212 >seq3708 Length=1771 Score = 98.7 bits (108), Expect = 4e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| ||||| || || || || ||||| || || | || || ||| |||| Sbjct 1495 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATC 1436 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || || | | ||| ||||| || ||||||||||||||||| || ||||| Sbjct 1435 TGATACAATAGAGAATGTAAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCA 1376 Query 391169 ACAACGTTTAATTTTCTCAGGGAA 391192 |||||||| |||||| | || || Sbjct 1375 GCAACGTTTGATTTTCGCTGGTAA 1352 Score = 91.5 bits (100), Expect = 6e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 ||||| ||||| || || || || ||||| || || | || || ||| ||||||||| Sbjct 1771 ATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCTGATACA 1712 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 || || | | ||| |||||||||||||| ||||||||||| || ||||| |||||| Sbjct 1711 ATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAGCAACGT 1652 Query 391176 TTAATTTT 391183 | ||||| Sbjct 1651 CTGATTTT 1644 >seq2639 Length=264 Score = 98.7 bits (108), Expect = 4e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||||||||| || || || || ||||| || || | || || ||| |||| Sbjct 136 AATGCAAATTTTCGTTAAGACCCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATC 195 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || || | | ||| |||||||||||||| ||||||||||| || ||||| Sbjct 196 TGATACAATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCGGATCA 255 Query 391169 ACAACGT 391175 ||||||| Sbjct 256 ACAACGT 262 >seq1493 Length=366 Score = 98.7 bits (108), Expect = 4e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||||||||| || || || || ||||| || || | || || ||| |||| Sbjct 238 AATGCAAATTTTCGTTAAGACTCTAACCGGCAAAACCATCACCTTAGAAGTAGAACCATC 297 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || || | | ||| |||||||||||||| ||||||||||| || ||||| Sbjct 298 TGATACAATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCGGATCA 357 Query 391169 ACAACGT 391175 ||||||| Sbjct 358 ACAACGT 364 >seq1996 Length=320 Score = 96.9 bits (106), Expect = 1e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 ||||| ||||| || || || || ||||| || || | || || ||| ||||||||| Sbjct 320 ATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCTGATACA 261 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 || || | | ||| ||||| || ||||||||||||||||| || |||||||||||| Sbjct 260 ATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCGGATCAACAACGT 201 Query 391176 TTAATTTT 391183 || ||||| Sbjct 200 TTGATTTT 193 >seq3029 Length=236 Score = 91.5 bits (100), Expect = 6e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| ||||| || || || || ||||| || || | || || ||| |||| Sbjct 6 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATC 65 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || || | | ||| ||||| || ||||||||||||||||| || ||||| Sbjct 66 TGATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCAGATCA 125 Query 391169 ACAACGTTTAATTTT 391183 |||||| | ||||| Sbjct 126 GCAACGTCTGATTTT 140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975614005509392