Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20sp._20T8_20[genbank_20GCA_5F001447745.1_202015-11-24]
4,124 sequences; 49,331,761 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq3725 150 7e-31
seq3681 122 3e-22
seq2781 122 3e-22
seq2423 122 3e-22
seq529 122 3e-22
seq99 120 1e-21
seq1681 100 1e-15
seq266 100 1e-15
seq3708 98.7 4e-15
seq2639 98.7 4e-15
seq1493 98.7 4e-15
seq1996 96.9 1e-14
seq3029 91.5 6e-13
>seq3725
Length=229766
Score = 150 bits (166), Expect = 7e-31
Identities = 271/393 (69%), Gaps = 5/393 (1%)
Strand=Plus/Plus
Query 451205 ATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATG 451264
|||||||| | || ||||| || | || | ||| | || |||||||| |||||
Sbjct 192006 ATTCAAGTCGAATACAAAGGCGAGTCGAAGTCATTTACACCAGAAGAAATCAGTGCTATG 192065
Query 451265 GTTCTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGC 451323
|| ||| | || ||||| ||||| || ||| ||| | || | |||| |||||
Sbjct 192066 GTG-TTAGTGAAGATGAAGGAAACTGCCGAAGCTTATTTGGGAAAAACTGTTAAGGATGC 192124
Query 451324 AGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGG 451383
|||||||||||||| || ||||| || ||| | || || || || || ||||| || ||
Sbjct 192125 CGTAATTACTGTTCCGGCATATTTTAACGATTCTCAGCGTCAGGCGACCAAAGACGCTGG 192184
Query 451384 ACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGC 451443
| ||| ||||||| |||||| | || || || || ||||| ||||| ||||| | ||
Sbjct 192185 AACGATTTCTGGTTTGAATGTTTTGCGTATCATCAACGAACCAACAGCGGCTGCAATTGC 192244
Query 451444 ATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGG 451503
|||||||| | | ||| | | ||| |||| || | ||||||| ||||
Sbjct 192245 TTATGGACTTG---ATAGAAAGGGTGGCGGTGAACGAAATGTTCTGATATTTGACCTTGG 192301
Query 451504 TGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGC 451563
||| || ||| |||| ||| | | | || |||||||| | ||||| || ||| |
Sbjct 192302 TGGTGGTACTTTTGATGTGTCTATTTTGACCATCGAAGATGGCATTTTTGAGGTCAAGTC 192361
Query 451564 AACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596
||| |||||| |||||| | || ||||| ||
Sbjct 192362 TACCGCTGGTGACACTCATTTGGGTGGTGAGGA 192394
>seq3681
Length=661693
Score = 122 bits (134), Expect = 3e-22
Identities = 108/135 (80%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||||||||| || || ||||| ||||| || ||| | || || ||| ||||
Sbjct 18969 AATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATC 19028
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| |||||| | | ||| ||||| || ||||||||||||||||| || |||||
Sbjct 19029 TGATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCA 19088
Query 391169 ACAACGTTTAATTTT 391183
||||||||| |||||
Sbjct 19089 ACAACGTTTGATTTT 19103
Score = 104 bits (114), Expect = 9e-17
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | || || || ||||| |||||||| ||||| |||||||| || || ||| | ||
Sbjct 18004 AATGCAGATATTTGTGAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCCTC 18063
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||| | |||||| | | || |||||||| ||||| || |||||||| || |||||
Sbjct 18064 TGACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCA 18123
Query 391169 ACAACGTTTAATTTT 391183
||||||| | |||||
Sbjct 18124 ACAACGTCTGATTTT 18138
Score = 100 bits (110), Expect = 1e-15
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| ||||| || || || || ||||| || || | || || ||| ||||
Sbjct 10317 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATC 10376
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| || || | | ||| ||||| || ||||||||||||||||| || |||||
Sbjct 10377 TGATACAATAGAGAATGTAAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCA 10436
Query 391169 ACAACGTTTAATTTT 391183
||||||||| |||||
Sbjct 10437 ACAACGTTTGATTTT 10451
Score = 100 bits (110), Expect = 1e-15
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| ||||| || || ||||| ||||| || || | || || ||| ||||
Sbjct 19532 AATGCAAATTTTTGTTAAGACCCTAACTGGGAAAACCATCACGTTGGAAGTGGAACCATC 19591
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| |||| | | ||| || |||||||||||||| ||||||||||| |||||
Sbjct 19592 TGATACTGTTGAGAATGTGAAAGGGAAGATTCAAGATAAGGAGGGAATTCCTCCAGATCA 19651
Query 391169 ACAACGTTTAATTTT 391183
||| ||| | |||||
Sbjct 19652 ACAGCGTCTGATTTT 19666
Score = 95.1 bits (104), Expect = 5e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| ||||| || || || || ||||| || || | || || ||| ||||
Sbjct 10034 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATC 10093
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| || || | | ||| |||||||||||||| ||||||||||| || |||||
Sbjct 10094 TGATACAATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCAGATCA 10153
Query 391169 ACAACGTTTAATTTT 391183
|||||| | |||||
Sbjct 10154 GCAACGTCTGATTTT 10168
Score = 91.5 bits (100), Expect = 6e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| ||||| || || || || ||||| || || | || || ||| ||||
Sbjct 19249 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATC 19308
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| || || | | ||| ||||| || ||||||||||||||||| || |||||
Sbjct 19309 TGATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCAGATCA 19368
Query 391169 ACAACGTTTAATTTT 391183
|||||| | |||||
Sbjct 19369 GCAACGTCTGATTTT 19383
>seq2781
Length=253
Score = 122 bits (134), Expect = 3e-22
Identities = 108/135 (80%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||||||||| || || ||||| ||||| || ||| | || || ||| ||||
Sbjct 39 AATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATC 98
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| || ||| | | ||| ||||||||||||||| || |||||||| || |||||
Sbjct 99 TGATACAATAGAAAATGTGAAAGGAAAAATTCAAGATAAAGAGGGAATTCCACCGGATCA 158
Query 391169 ACAACGTTTAATTTT 391183
||||||||| |||||
Sbjct 159 ACAACGTTTGATTTT 173
>seq2423
Length=9717
Score = 122 bits (134), Expect = 3e-22
Identities = 108/135 (80%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||||||||| || || ||||| ||||| || ||| | || || ||| ||||
Sbjct 2467 AATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATC 2408
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| || ||| | | ||| ||||||||||||||| || |||||||| || |||||
Sbjct 2407 TGATACAATAGAAAATGTGAAAGGAAAAATTCAAGATAAAGAGGGAATTCCACCGGATCA 2348
Query 391169 ACAACGTTTAATTTT 391183
||||||||| |||||
Sbjct 2347 ACAACGTTTGATTTT 2333
Score = 104 bits (114), Expect = 9e-17
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | || || || ||||| |||||||| ||||| |||||||| || || ||| | ||
Sbjct 3612 AATGCAGATATTTGTCAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCCTC 3553
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||| | |||||| | | || |||||||| ||||| || |||||||| || |||||
Sbjct 3552 TGACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCA 3493
Query 391169 ACAACGTTTAATTTT 391183
||||||| | |||||
Sbjct 3492 ACAACGTCTGATTTT 3478
>seq529
Length=107346
Score = 122 bits (134), Expect = 3e-22
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 451219 TAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAAT 451278
||| ||||||| ||| || |||| |||||||||||| | |||||| | |||||
Sbjct 46218 TAACGGTGAAAAGAAATTGTTCACTCCCGAAGAAATTTCAGCGATGGTTTTGTTGAAAAT 46277
Query 451279 GAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCC 451338
|||||||| || || ||| | || ||| | |||| || | || |||||
Sbjct 46278 GAAAGAAATTGCCGAGGCTTATTTGGGCAAAGAAGTGAAAAATGCCGTCGTCACGGTTCC 46337
Query 451339 CGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTT 451398
||||||||||| ||||||||||| ||||| || ||||||||||| ||||||||| |
Sbjct 46338 AGCTTATTTCAACGATGCACAACGTCAAGCTACCAAAGATGCAGGCACCATTGCTGGTCT 46397
Query 451399 AAATGTTCTTCGAATTATTAATGAACC 451425
|||||| | ||||| || || |||||
Sbjct 46398 TAATGTTGTACGAATCATCAACGAACC 46424
>seq99
Length=156819
Score = 120 bits (132), Expect = 1e-21
Identities = 114/146 (78%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106
|| ||| | || ||||| || ||||| ||||| |||||||| || || || |||||| ||
Sbjct 40939 ATTATGCAGATATTCGTGAAGACACTTACTGGAAAAACTATAACACTAGAAGTTGAACCA 40880
Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166
|| || | ||| ||| | ||||| |||||||| ||||||||||| ||||||||||||
Sbjct 40879 TCAGACACCATCGAAAATGTTAAAAGTAAAATTCAGGATAAGGAAGGCATTCCTCCTGAT 40820
Query 391167 CAACAACGTTTAATTTTCTCAGGGAA 391192
|| ||| | ||||| || |||| ||
Sbjct 40819 CAGCAAAGATTAATCTTTGCAGGTAA 40794
Score = 104 bits (114), Expect = 9e-17
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| || |||||| | ||||| ||||| || || | || || || ||||
Sbjct 39969 AATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCATC 39910
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| |||||| | | ||| |||||||||||||||||||| ||||| ||||||||
Sbjct 39909 TGATACGATTGAAAATGTAAAAAGTAAAATTCAAGATAAGGAAGGCATTCCACCTGATCA 39850
Query 391169 ACAACGTTTAATTTT 391183
||||| || || ||
Sbjct 39849 GCAACGATTGATATT 39835
Score = 98.7 bits (108), Expect = 4e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| || |||||| | ||||| ||||| || || | || || || ||||
Sbjct 40254 ATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCATCA 40195
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| |||||| | | ||| |||||||||||||||||||| ||||| ||||||||
Sbjct 40194 GATACGATTGAAAATGTGAAAAGTAAAATTCAAGATAAGGAAGGCATTCCGCCTGATCAG 40135
Query 391170 CAACGTTTAATTTT 391183
||||| || || ||
Sbjct 40134 CAACGATTGATATT 40121
>seq1681
Length=34527
Score = 100 bits (110), Expect = 1e-15
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| ||||| || || || || ||||| || || | || || ||| ||||
Sbjct 29983 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATC 30042
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| || || | | ||| ||||| || ||||||||||||||||| || |||||
Sbjct 30043 TGATACAATAGAGAATGTAAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCA 30102
Query 391169 ACAACGTTTAATTTT 391183
||||||||| |||||
Sbjct 30103 ACAACGTTTGATTTT 30117
Score = 91.5 bits (100), Expect = 6e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| ||||| || || || || ||||| || || | || || ||| ||||
Sbjct 29700 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATC 29759
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| || || | | ||| || ||||||||||| ||||||||||| || |||||
Sbjct 29760 TGATACAATAGAGAATGTAAAAGGCAAGATTCAAGATAAAGAAGGAATTCCACCAGATCA 29819
Query 391169 ACAACGTTTAATTTT 391183
|||||| | |||||
Sbjct 29820 GCAACGTCTGATTTT 29834
>seq266
Length=548
Score = 100 bits (110), Expect = 1e-15
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| || |||||| | ||||| ||||| || || | || || || ||||
Sbjct 346 AATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCATC 287
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|||| |||||| | | ||| |||||||||||||||||||| ||||| ||||||||
Sbjct 286 AGATACGATTGAAAATGTGAAAAGTAAAATTCAAGATAAGGAAGGCATTCCGCCTGATCA 227
Query 391169 ACAACGTTTAATTTT 391183
||||| || || ||
Sbjct 226 GCAACGATTGATATT 212
>seq3708
Length=1771
Score = 98.7 bits (108), Expect = 4e-15
Identities = 108/144 (75%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| ||||| || || || || ||||| || || | || || ||| ||||
Sbjct 1495 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATC 1436
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| || || | | ||| ||||| || ||||||||||||||||| || |||||
Sbjct 1435 TGATACAATAGAGAATGTAAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCA 1376
Query 391169 ACAACGTTTAATTTTCTCAGGGAA 391192
|||||||| |||||| | || ||
Sbjct 1375 GCAACGTTTGATTTTCGCTGGTAA 1352
Score = 91.5 bits (100), Expect = 6e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115
||||| ||||| || || || || ||||| || || | || || ||| |||||||||
Sbjct 1771 ATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCTGATACA 1712
Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175
|| || | | ||| |||||||||||||| ||||||||||| || ||||| ||||||
Sbjct 1711 ATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAGCAACGT 1652
Query 391176 TTAATTTT 391183
| |||||
Sbjct 1651 CTGATTTT 1644
>seq2639
Length=264
Score = 98.7 bits (108), Expect = 4e-15
Identities = 98/127 (77%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||||||||| || || || || ||||| || || | || || ||| ||||
Sbjct 136 AATGCAAATTTTCGTTAAGACCCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATC 195
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| || || | | ||| |||||||||||||| ||||||||||| || |||||
Sbjct 196 TGATACAATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCGGATCA 255
Query 391169 ACAACGT 391175
|||||||
Sbjct 256 ACAACGT 262
>seq1493
Length=366
Score = 98.7 bits (108), Expect = 4e-15
Identities = 98/127 (77%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||||||||| || || || || ||||| || || | || || ||| ||||
Sbjct 238 AATGCAAATTTTCGTTAAGACTCTAACCGGCAAAACCATCACCTTAGAAGTAGAACCATC 297
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| || || | | ||| |||||||||||||| ||||||||||| || |||||
Sbjct 298 TGATACAATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCGGATCA 357
Query 391169 ACAACGT 391175
|||||||
Sbjct 358 ACAACGT 364
>seq1996
Length=320
Score = 96.9 bits (106), Expect = 1e-14
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115
||||| ||||| || || || || ||||| || || | || || ||| |||||||||
Sbjct 320 ATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCTGATACA 261
Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175
|| || | | ||| ||||| || ||||||||||||||||| || ||||||||||||
Sbjct 260 ATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCGGATCAACAACGT 201
Query 391176 TTAATTTT 391183
|| |||||
Sbjct 200 TTGATTTT 193
>seq3029
Length=236
Score = 91.5 bits (100), Expect = 6e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| ||||| || || || || ||||| || || | || || ||| ||||
Sbjct 6 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATC 65
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| || || | | ||| ||||| || ||||||||||||||||| || |||||
Sbjct 66 TGATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCAGATCA 125
Query 391169 ACAACGTTTAATTTT 391183
|||||| | |||||
Sbjct 126 GCAACGTCTGATTTT 140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975614005509392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |