Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20sp._20T8_20[genbank_20GCA_5F001447745.1_202015-11-24] 4,124 sequences; 49,331,761 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq929 86.0 3e-12 >seq929 Length=70851 Score = 86.0 bits (94), Expect = 3e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 24675 TAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCC 24734 |||| | |||||||| || ||||| | ||| ||||| |||||||||| |||||||| Sbjct 56026 TAGCCGTCACTGCTGGCTTGGTTCTCAAATAGTACATCCCAGTTTTCAGACCCTTCTTCC 56085 Query 24735 AACCGTAAAAATGCATTGATGTTAGTTTTGCA 24766 | ||||| |||||||||||||| | ||| ||| Sbjct 56086 AGCCGTAGAAATGCATTGATGTCAATTTAGCA 56117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253027281893300