Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20sp._20T8_20[genbank_20GCA_5F001447745.1_202015-11-24] 4,124 sequences; 49,331,761 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1681 138 2e-27 seq3681 132 9e-26 seq99 129 1e-24 seq2423 127 4e-24 seq3708 125 1e-23 seq2781 125 1e-23 seq3029 123 5e-23 seq266 123 5e-23 seq1996 116 7e-21 seq2639 111 3e-19 seq1493 107 4e-18 seq3780 89.7 1e-12 >seq1681 Length=34527 Score = 138 bits (152), Expect = 2e-27 Identities = 115/141 (82%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||| |||||||| || |||||||| |||||||||||||| || Sbjct 29840 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATCTTGCCT 29781 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||||| || || |||||| |||||||||||||| || ||||| ||||| || | Sbjct 29780 TTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTAAGA 29721 Query 82791 GTCTTTACAAATATCTGCATT 82811 ||||| ||||| || |||||| Sbjct 29720 GTCTTAACAAAAATTTGCATT 29700 Score = 122 bits (134), Expect = 2e-22 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 |||| || |||||||| || | | ||||||||| || || |||||||||||||| || Sbjct 30132 AGTTACTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGT 30073 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 || || |||||||||| || || |||||| ||||||||||| || || ||||| ||| Sbjct 30072 ATTTTCCCTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTG 30013 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || | ||||| ||||| || |||||| Sbjct 30012 CCGGTAAGAGTCTTAACAAAAATTTGCATT 29983 >seq3681 Length=661693 Score = 132 bits (146), Expect = 9e-26 Identities = 114/141 (81%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||| |||||||| || |||||||| ||||||||||| || || Sbjct 10174 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGCCT 10115 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||||| || || |||||| |||||||||||||| || ||||| ||||| || | Sbjct 10114 TTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTAAGA 10055 Query 82791 GTCTTTACAAATATCTGCATT 82811 ||||| ||||| || |||||| Sbjct 10054 GTCTTAACAAAAATTTGCATT 10034 Score = 129 bits (142), Expect = 1e-24 Identities = 113/141 (80%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||| |||||||| || |||||||||||||| || || || || Sbjct 19389 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTGCCT 19330 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||||| || || |||||| |||||||||||||| || ||||| ||||| || | Sbjct 19329 TTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTAAGA 19270 Query 82791 GTCTTTACAAATATCTGCATT 82811 ||||| ||||| || |||||| Sbjct 19269 GTCTTAACAAAAATTTGCATT 19249 Score = 123 bits (136), Expect = 5e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || | | ||||||||| || || |||||||||||||| || || || || Sbjct 19109 CCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTCCCT 19050 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || ||||||||||| |||||| |||||||||||||||||||| || || || || | Sbjct 19049 TTCACATTTTCAATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCCAGTAAGG 18990 Query 82791 GTCTTTACAAATATCTGCATT 82811 ||||| || || || |||||| Sbjct 18989 GTCTTAACGAAAATTTGCATT 18969 Score = 123 bits (136), Expect = 5e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | |||||||||||||| ||||| ||||||||||||||||| || Sbjct 19672 CCAGCAAAAATCAGACGCTGTTGATCTGGAGGAATTCCCTCCTTATCTTGAATCTTCCCT 19613 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || ||||| |||| |||||| ||||| |||||||| || || || || || || | Sbjct 19612 TTCACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTTTTCCCAGTTAGG 19553 Query 82791 GTCTTTACAAATATCTGCATT 82811 ||||| ||||| || |||||| Sbjct 19552 GTCTTAACAAAAATTTGCATT 19532 Score = 122 bits (134), Expect = 2e-22 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 |||| || |||||||| || | | ||||||||| || || |||||||||||||| || Sbjct 10466 AGTTACTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGT 10407 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 || || |||||||||| || || |||||| ||||||||||| || || ||||| ||| Sbjct 10406 ATTTTCCCTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTG 10347 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || | ||||| ||||| || |||||| Sbjct 10346 CCGGTAAGAGTCTTAACAAAAATTTGCATT 10317 Score = 122 bits (134), Expect = 2e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | |||||||| || || || ||||| || ||||||||||| | Sbjct 18476 CCAGCAAAAATAAGCCGCTGTTGATCCGGTGGAATGCCTTCTTTGTCTTGAATCTTGCTT 18417 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||||||||||| ||||| || || ||||| | || ||||| || ||||||||| Sbjct 18416 TTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCAAC 18357 Query 82791 GTCTTTACAAATATCTGCAT 82810 || || |||||||||||||| Sbjct 18356 GTTTTCACAAATATCTGCAT 18337 Score = 116 bits (128), Expect = 7e-21 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||||||| || || | ||||||||| || || ||||| || ||||| ||||| || Sbjct 18147 TTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 18088 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | || ||||||||||| || ||| ||||| ||||||| ||| || || || || ||| Sbjct 18087 CCCTTCACATTTTCAATTGTGTCAGAGGGTTCCACTTCCAGAGTAATGGTTTTCCCAGTC 18028 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 | || || ||||||||||||||| Sbjct 18027 AGAGTTTTCACAAATATCTGCATT 18004 >seq99 Length=156819 Score = 129 bits (142), Expect = 1e-24 Identities = 113/141 (80%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || | || ||| ||||| || || || ||||||||||||||||| || | Sbjct 39829 CCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTACTT 39888 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 ||||||||||||||||||||| || ||||||||||| || || || || || || || Sbjct 39889 TTTACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTAAT 39948 Query 82791 GTCTTTACAAATATCTGCATT 82811 || || ||||| ||||||||| Sbjct 39949 GTTTTCACAAAAATCTGCATT 39969 Score = 122 bits (134), Expect = 2e-22 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || | || ||| ||||| || || || ||||||||||||||||| ||| || Sbjct 40115 CCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAAT-TTTACT 40173 Query 82731 TTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAA 82789 ||| ||||||||||||||||| || ||||||||||| || || || || || || || Sbjct 40174 TTTCACATTTTCAATCGTATCTGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTAA 40233 Query 82790 CGTCTTTACAAATATCTGCAT 82810 || || ||||| |||||||| Sbjct 40234 TGTTTTCACAAAAATCTGCAT 40254 Score = 116 bits (128), Expect = 7e-21 Identities = 116/148 (78%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||||| |||||| ||||| ||||| || ||||||||||| ||||| ||| Sbjct 40794 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAAT-TTT 40852 Query 82728 GCTTTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 ||||| |||||||| || || || ||||| ||||| | ||||| || || || || Sbjct 40853 ACTTTTAACATTTTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGT 40912 Query 82787 CAACGTCTTTACAAATATCTGCATTATT 82814 | ||||| || ||||||||||| ||| Sbjct 40913 AAGTGTCTTCACGAATATCTGCATAATT 40940 >seq2423 Length=9717 Score = 127 bits (140), Expect = 4e-24 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||||||||||| || || ||||| || ||||||||||| | Sbjct 3140 CCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCTTGAATCTTGCTT 3199 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||||||||||| ||||| || || ||||| | || ||||| || ||||||||| Sbjct 3200 TTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCAAC 3259 Query 82791 GTCTTTACAAATATCTGCAT 82810 || || |||||||||||||| Sbjct 3260 GTTTTCACAAATATCTGCAT 3279 Score = 125 bits (138), Expect = 1e-23 Identities = 116/147 (79%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 82665 TGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATC 82724 || || |||||||| || | | ||||||||| || || ||||| || ||||||||||| Sbjct 2321 TGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATT 2380 Query 82725 TTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCT 82784 ||| |||| |||||||| || |||||| |||||||||||||||||||| || || || Sbjct 2381 TTTCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCCA 2440 Query 82785 GTCAACGTCTTTACAAATATCTGCATT 82811 || | ||||| || || || |||||| Sbjct 2441 GTAAGGGTCTTAACGAAAATTTGCATT 2467 Score = 116 bits (128), Expect = 7e-21 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||||||| || || | ||||||||| || || ||||| || ||||| ||||| || Sbjct 3469 TTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 3528 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | || ||||||||||| || ||| ||||| ||||||| ||| || || || || ||| Sbjct 3529 CCCTTCACATTTTCAATTGTGTCAGAGGGTTCCACTTCCAGAGTAATGGTTTTCCCAGTC 3588 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 | || || ||||||||||||||| Sbjct 3589 AGAGTTTTGACAAATATCTGCATT 3612 >seq3708 Length=1771 Score = 125 bits (138), Expect = 1e-23 Identities = 108/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||| |||||||| || |||||||| ||||||||||| || || Sbjct 1638 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGCCT 1697 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||||| || || |||||| |||||||||||||| || ||||| ||||| || | Sbjct 1698 TTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTAAGA 1757 Query 82791 GTCTTTACAAATAT 82804 ||||| ||||| || Sbjct 1758 GTCTTAACAAAAAT 1771 Score = 111 bits (122), Expect = 3e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||| || || | | ||| ||||| || || |||||||||||||| || || || Sbjct 1352 TTACCAGCGAAAATCAAACGTTGCTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTC 1411 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 |||||||||| || || |||||| ||||||||||| || || ||||| ||||| || Sbjct 1412 CCTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTA 1471 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 | ||||| ||||| || |||||| Sbjct 1472 AGAGTCTTAACAAAAATTTGCATT 1495 >seq2781 Length=253 Score = 125 bits (138), Expect = 1e-23 Identities = 116/147 (79%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 82665 TGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATC 82724 || || |||||||| || | | ||||||||| || || ||||| || ||||||||||| Sbjct 185 TGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATT 126 Query 82725 TTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCT 82784 ||| |||| |||||||| || |||||| |||||||||||||||||||| || || || Sbjct 125 TTTCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCCA 66 Query 82785 GTCAACGTCTTTACAAATATCTGCATT 82811 || | ||||| || || || |||||| Sbjct 65 GTAAGGGTCTTAACGAAAATTTGCATT 39 >seq3029 Length=236 Score = 123 bits (136), Expect = 5e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||| |||||||| || |||||||||||||| || || || || Sbjct 146 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTGCCT 87 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||||| || || |||||| ||||||||||| || || ||||| ||||| || | Sbjct 86 TTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTAAGA 27 Query 82791 GTCTTTACAAATATCTGCATT 82811 ||||| ||||| || |||||| Sbjct 26 GTCTTAACAAAAATTTGCATT 6 >seq266 Length=548 Score = 123 bits (136), Expect = 5e-23 Identities = 114/142 (80%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || | || ||| ||||| || || || ||||||||||||||||| ||| || Sbjct 206 CCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAAT-TTTACT 264 Query 82731 TTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAA 82789 ||| ||||||||||||||||| || ||||||||||| || || || || || || || Sbjct 265 TTTCACATTTTCAATCGTATCTGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTAA 324 Query 82790 CGTCTTTACAAATATCTGCATT 82811 || || ||||| ||||||||| Sbjct 325 TGTTTTCACAAAAATCTGCATT 346 >seq1996 Length=320 Score = 116 bits (128), Expect = 7e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||||||| || | | ||||||||| || || |||||||||||||| || || || Sbjct 184 TTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTG 243 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 |||||||||| || || |||||| |||||||||||||| || ||||| ||||| || Sbjct 244 CCTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTA 303 Query 82788 AACGTCTTTACAAATAT 82804 | ||||| ||||| || Sbjct 304 AGAGTCTTAACAAAAAT 320 >seq2639 Length=264 Score = 111 bits (122), Expect = 3e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 82688 TTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGT 82747 ||||||||| || || |||||||| ||||||||||| || |||||||||| || || || Sbjct 259 TTGTTGATCCGGTGGAATTCCTTCTTTATCTTGAATTTTGCCTTTTACATTCTCTATTGT 200 Query 82748 ATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTG 82807 |||| ||||||||||| || || ||||| ||||| || | ||||| || || || || Sbjct 199 ATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTAAGGGTCTTAACGAAAATTTG 140 Query 82808 CATT 82811 |||| Sbjct 139 CATT 136 >seq1493 Length=366 Score = 107 bits (118), Expect = 4e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 82688 TTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGT 82747 ||||||||| || || |||||||| ||||||||||| || |||||||||| || || || Sbjct 361 TTGTTGATCCGGTGGAATTCCTTCTTTATCTTGAATTTTGCCTTTTACATTCTCTATTGT 302 Query 82748 ATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTG 82807 |||| ||||||||||| || || || || ||||| || | ||||| || || || || Sbjct 301 ATCAGATGGTTCTACTTCTAAGGTGATGGTTTTGCCGGTTAGAGTCTTAACGAAAATTTG 242 Query 82808 CATT 82811 |||| Sbjct 241 CATT 238 Score = 95.1 bits (104), Expect = 2e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||| |||||||| || |||||||| ||||||||||| || || Sbjct 95 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGCCT 36 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTC 82765 |||||||| || || |||||| ||||||||||| Sbjct 35 TTTACATTCTCTATTGTATCAGATGGTTCTACTTC 1 >seq3780 Length=218817 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 |||||||| || ||||| || || || ||||| | ||| |||||| ||| || |||||| Sbjct 71115 CCTTCCTTGTCCTGAATTTTAGCCTTCACATTCTGAATTGTATCAGAAGGCTCCACTTCC 71056 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || ||||| ||||| | || || |||||||| ||||| Sbjct 71055 AAAGTGATGGTCTTTCCTGTTAGGGTTTTCACAAATATTTGCAT 71012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981775321478036