Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20sp._20T8_20[genbank_20GCA_5F001447745.1_202015-11-24]
4,124 sequences; 49,331,761 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq111 93.3 5e-14
>seq111
Length=593702
Score = 93.3 bits (102), Expect = 5e-14
Identities = 140/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
|| || ||||||| | ||||||||||| |||| || || || || ||||| ||
Sbjct 137842 GTAAAAATGTATCTTGCACTGGCCGCATCTCTGCCGCCGAGAAGTCGAGTGCCAAATTGA 137783
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| || | | ||||| ||| ||| |||||| ||||| ||||||||||| | |
Sbjct 137782 CCAATCGGTAGCAATATGTTGATGTTATTGCTGCCCACAAAATTATGAGCCAAATTTATA 137723
Query 152149 ATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCC 152208
|| |||| | |||||| |||| ||||||||||| || | || || || | | | ||
Sbjct 137722 ATGGTGCTCATCAGACTGACTTCGCCGTGGTGATAAGCTGAATGTTCAGCAACGGAACCA 137663
Query 152209 GCCAACTGCGCCACCTTCA 152227
|| | ||| || || ||||
Sbjct 137662 GCAAGCTGAGCGACTTTCA 137644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547187791015200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |