Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20sp._20T9_20[genbank_20GCA_5F001447505.1_202015-11-24] 5,752 sequences; 49,075,249 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq118 82.4 7e-11 >seq118 Length=130256 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 145670 TATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTA 145729 ||||| || || |||| ||||| || |||||| || || ||||||||||||||||| Sbjct 95383 TATTGAACAATTTCGGTGCACAGGTTTGAACATTTTATAGTACCCAGATTTTGCTGATTC 95442 Query 145730 CTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTC 145779 ||| || |||||||| || ||||||| ||| ||||| ||| || || Sbjct 95443 GATTTTCTATTGCACGCATCTTTGTAGACCATAAACGGTGTGCCGGTTTC 95492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471978862279680