Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20sp._20T9_20[genbank_20GCA_5F001447505.1_202015-11-24]
5,752 sequences; 49,075,249 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq118 86.0 3e-12
>seq118
Length=130256
Score = 86.0 bits (94), Expect = 3e-12
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 24665 GTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAAT 24724
|| ||||| |||| | ||||| || || ||||| | ||| ||||| ||||||||||
Sbjct 94148 GTGAATTGAATAGCCGTCACTGCCGGCTTGGTTCTCAAATAGTACATCCCAGTTTTCAGA 94207
Query 24725 TTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGCA 24766
||||||||| ||||| |||||||||||||| | ||| |||
Sbjct 94208 CCCTTCTTCCAGCCGTAGAAATGCATTGATGTCAATTTAGCA 94249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253022261263400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |