Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20sp._20T9_20[genbank_20GCA_5F001447505.1_202015-11-24] 5,752 sequences; 49,075,249 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq241 109 5e-19 seq315 105 6e-18 seq36 105 6e-18 seq4683 95.1 1e-14 seq118 91.5 1e-13 >seq241 Length=39592 Score = 109 bits (120), Expect = 5e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| ||||| || ||||| ||||| || ||||| ||| || | Sbjct 21784 ATGCAGATATTTGTCAAAACTCTAACTGGGAAAACCATTACTCTGGAAGTGGAACCCTCA 21725 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || || || || || ||||| ||||| || ||||||||| Sbjct 21724 GACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCAA 21665 Query 24824 CAACGTTTGATCTTTGCCGGGAA 24846 |||||| |||| ||||| || || Sbjct 21664 CAACGTCTGATTTTTGCTGGTAA 21642 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || || || ||||| ||||| || ||||| ||| || | Sbjct 23066 ATGCAGATATTTGTGAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCCTCA 23007 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || || || || || ||||| ||||| || ||||||||| Sbjct 23006 GACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCAA 22947 Query 24824 CAACGTTTGATCTTTGCCGGGAA 24846 |||||| |||| ||||| || || Sbjct 22946 CAACGTCTGATTTTTGCTGGTAA 22924 Score = 104 bits (114), Expect = 2e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || || || || ||||| || || | ||||||||| | | Sbjct 19694 ATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATCT 19635 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||||| || ||| ||| || ||||| ||||| ||||| || || |||||| Sbjct 19634 GATACAATAGAAAATGTGAAAGGAAAAATTCAAGATAAAGAGGGAATTCCACCGGATCAA 19575 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAG 24850 ||||||||||| ||||| || || ||| Sbjct 19574 CAACGTTTGATTTTTGCTGGTAAGCAG 19548 Score = 102 bits (112), Expect = 7e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | |||||| | || || ||||| ||||| || ||||| || | | Sbjct 21453 GATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTC 21394 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| | |||| |||||| ||||| |||||||||||||| || || || ||||| Sbjct 21393 AGATACAATTGAAAATGTAAAAAGCAAGATTCAAGACAAAGAAGGCATTCCACCAGATCA 21334 Query 24823 ACAACGTTTGATCTTTGCCGG 24843 ||| || |||| ||||| || Sbjct 21333 ACAGCGGCTGATTTTTGCTGG 21313 Score = 102 bits (112), Expect = 7e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | |||||| | || || ||||| ||||| || ||||| || | | Sbjct 22735 GATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTC 22676 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| | |||| |||||| ||||| |||||||||||||| || || || ||||| Sbjct 22675 AGATACAATTGAAAATGTAAAAAGCAAGATTCAAGACAAAGAAGGCATTCCACCAGATCA 22616 Query 24823 ACAACGTTTGATCTTTGCCGG 24843 ||| || |||| ||||| || Sbjct 22615 ACAGCGGCTGATTTTTGCTGG 22595 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || || ||||| ||||| || || | ||||||||| | | Sbjct 18004 ATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 17945 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||| | |||||| || || ||||| ||||||||||| || || ||||| Sbjct 17944 GATACAATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAG 17885 Query 24824 CAACGTTTGATCTTTGCCGG 24843 |||||| |||| ||||| || Sbjct 17884 CAACGTCTGATTTTTGCTGG 17865 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || || || || ||||| || || | ||||||||| | | Sbjct 20256 ATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATCT 20197 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||||| || ||| ||| || ||||| ||||| ||||| || || |||||| Sbjct 20196 GATACAATAGAAAATGTGAAAGGAAAAATTCAAGATAAAGAGGGAATTCCACCGGATCAA 20137 Query 24824 CAACGTTTGATCTTTGCCGG 24843 ||||||||||| ||||| || Sbjct 20136 CAACGTTTGATTTTTGCTGG 20117 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || || ||||| ||||| || || | ||||||||| | | Sbjct 19976 ATGCAAATTTTCGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 19917 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||| | |||||| || || || || || |||||||| || || |||||| Sbjct 19916 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 19857 Query 24824 CAACGTTTGATCTTTGCCGGGAA 24846 ||||||||||| ||||| || || Sbjct 19856 CAACGTTTGATTTTTGCTGGTAA 19834 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || || ||||| ||||| || || | ||||||||| | | Sbjct 20538 ATGCAAATTTTCGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 20479 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||| | |||||| || || || || || |||||||| || || |||||| Sbjct 20478 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 20419 Query 24824 CAACGTTTGATCTTTGCCGGGAA 24846 ||||||||||| ||||| || || Sbjct 20418 CAACGTTTGATTTTTGCTGGTAA 20396 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || || ||||| ||||| || || | ||||||||| | | Sbjct 18849 ATGCAAATTTTCGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 18790 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||| | |||||| || || ||||| ||||||||||| || || ||||| Sbjct 18789 GATACAATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAG 18730 Query 24824 CAACGTTTGATCTTTGCCGG 24843 |||||| |||| ||||| || Sbjct 18729 CAACGTCTGATTTTTGCTGG 18710 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || || ||||| ||||| || || | ||||||||| | | Sbjct 19414 ATGCAAATTTTCGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 19355 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||| | |||||| || || || || || |||||||| || || |||||| Sbjct 19354 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 19295 Query 24824 CAACGTTTGATCTTTGCCGG 24843 ||||||||||| ||||| || Sbjct 19294 CAACGTTTGATTTTTGCTGG 19275 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || || ||||| ||||| || || | ||||||||| | | Sbjct 19131 ATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTAGAAGTAGAACCATCT 19072 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||| | || ||| || || || || || ||||| || || || |||||| Sbjct 19071 GATACAATAGAGAATGTGAAAGGCAAAATACAGGATAAGGAAGGCATTCCACCGGATCAA 19012 Query 24824 CAACGTTTGATCTTTGCCGGGAA 24846 ||||||||||| ||||| || || Sbjct 19011 CAACGTTTGATTTTTGCTGGTAA 18989 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || || || || ||||| || || | ||||||||| | | Sbjct 20818 ATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATCT 20759 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || ||| || || || || || |||||||| || || |||||| Sbjct 20758 GATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 20699 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAG 24850 ||||||||||| ||||| || || ||| Sbjct 20698 CAACGTTTGATTTTTGCTGGTAAGCAG 20672 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/144 (74%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAA-CTATTACGCTCGAAGTAGAAGCCAC 24762 ||||| || ||| |||| || || ||||| |||| | || || | ||||||||| | | Sbjct 18287 ATGCAAATTTTTGTTAAGACTCTTACCGGCAAAAACGATCACCTTAGAAGTAGAACCATC 18228 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||| | || ||| || || || || || ||||| || || || ||||| Sbjct 18227 TGATACAATAGAGAATGTGAAAGGCAAAATACAGGATAAGGAAGGCATTCCACCGGATCA 18168 Query 24823 ACAACGTTTGATCTTTGCCGGGAA 24846 |||||||||||| ||||| || || Sbjct 18167 ACAACGTTTGATTTTTGCTGGTAA 18144 >seq315 Length=12309 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || || || ||||| ||||| || ||||| ||| || | Sbjct 9226 ATGCAGATATTTGTCAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCCTCA 9167 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || || || || || ||||| ||||| || ||||||||| Sbjct 9166 GACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCAA 9107 Query 24824 CAACGTTTGATCTTTGCCGGGAA 24846 |||||| |||| ||||| || || Sbjct 9106 CAACGTCTGATTTTTGCTGGTAA 9084 Score = 104 bits (114), Expect = 2e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || || || || ||||| || || | ||||||||| | | Sbjct 11452 ATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATCT 11393 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||||| || ||| ||| || ||||| ||||| ||||| || || |||||| Sbjct 11392 GATACAATAGAAAATGTGAAAGGAAAAATTCAAGATAAAGAGGGAATTCCACCGGATCAA 11333 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAG 24850 ||||||||||| ||||| || || ||| Sbjct 11332 CAACGTTTGATTTTTGCTGGTAAGCAG 11306 Score = 104 bits (114), Expect = 2e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || || || || ||||| || || | ||||||||| | | Sbjct 12294 ATGCAAATTTTCGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATCT 12235 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||||| || ||| ||| || ||||| ||||| ||||| || || |||||| Sbjct 12234 GATACAATAGAAAATGTGAAAGGAAAAATTCAAGATAAAGAGGGAATTCCACCGGATCAA 12175 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAG 24850 ||||||||||| ||||| || || ||| Sbjct 12174 CAACGTTTGATTTTTGCTGGTAAGCAG 12148 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || || ||||| ||||| || || | ||||||||| | | Sbjct 11172 ATGCAAATTTTCGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 11113 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||| | |||||| || || || || || |||||||| || || |||||| Sbjct 11112 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 11053 Query 24824 CAACGTTTGATCTTTGCCGGGAA 24846 ||||||||||| ||||| || || Sbjct 11052 CAACGTTTGATTTTTGCTGGTAA 11030 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || || ||||| ||||| || || | ||||||||| | | Sbjct 11734 ATGCAAATTTTCGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 11675 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||| | |||||| || || || || || |||||||| || || |||||| Sbjct 11674 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 11615 Query 24824 CAACGTTTGATCTTTGCCGGGAA 24846 ||||||||||| ||||| || || Sbjct 11614 CAACGTTTGATTTTTGCTGGTAA 11592 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || || ||||| ||||| || || | ||||| ||| | | Sbjct 12014 ATGCAAATTTTTGTTAAGACCCTCACCGGCAAAACCATCACATTGGAAGTGGAACCATCT 11955 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || ||| || || || || || |||||||| || || |||||| Sbjct 11954 GATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 11895 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAG 24850 ||||||||||| ||||| || || ||| Sbjct 11894 CAACGTTTGATTTTTGCTGGTAAGCAG 11868 >seq36 Length=323583 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || || || ||||| ||||| || ||||| ||| || | Sbjct 17496 ATGCAGATATTTGTGAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCCTCA 17555 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || || || || || ||||| ||||| || ||||||||| Sbjct 17556 GACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCAA 17615 Query 24824 CAACGTTTGATCTTTGCCGGGAA 24846 |||||| |||| ||||| || || Sbjct 17616 CAACGTCTGATTTTTGCTGGTAA 17638 Score = 102 bits (112), Expect = 7e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | |||||| | || || ||||| ||||| || ||||| || | | Sbjct 17827 GATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTC 17886 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| | |||| |||||| ||||| |||||||||||||| || || || ||||| Sbjct 17887 AGATACAATTGAAAATGTAAAAAGCAAGATTCAAGACAAAGAAGGCATTCCACCAGATCA 17946 Query 24823 ACAACGTTTGATCTTTGCCGG 24843 ||| || |||| ||||| || Sbjct 17947 ACAGCGGCTGATTTTTGCTGG 17967 >seq4683 Length=240 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || || ||||| ||||| || || | ||||||||| | | Sbjct 142 ATGCAAATTTTCGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTAGAACCATCT 83 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||| | |||||| || || || || || |||||||| || || |||||| Sbjct 82 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAGGAAGGAATTCCACCGGATCAA 23 Query 24824 CAACGTTTGATCTTTGCCGG 24843 ||||||||||| ||||| || Sbjct 22 CAACGTTTGATTTTTGCTGG 3 >seq118 Length=130256 Score = 91.5 bits (100), Expect = 1e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182 |||| |||||||||| |||| || ||| || || ||||| | |||||| ||||| Sbjct 95383 TATTGAACAATTTCGGTGCACAGGTTTGAACATTTTATAGTACCCAGATTTTGCTGATTC 95442 Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTC 139242 ||||| || || ||||||||||| | |||| |||||||||| ||||| | ||| | | Sbjct 95443 GATTTTCTATTGCACGCATCTTTGTAGACCATAAACGGTGTGCCGGTTTCAATTTGAGAC 95502 Query 139243 TCTATAAT 139250 || ||||| Sbjct 95503 TCAATAAT 95510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449865252362560