Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20spiralis_20[refseq_20GCF_5F000181795.1_202011-01-11]
6,863 sequences; 63,525,422 total letters
Query= AC_000190.1
Length=33501
Score E
Sequences producing significant alignments: (Bits) Value
seq4 80.6 6e-11
>seq4
Length=12041450
Score = 80.6 bits (88), Expect = 6e-11
Identities = 97/132 (73%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 31245 TACTCCAACGTTGCCTCGGTAGTCTCTATCTATGACTCCAGCGGCTATATCAAGACTGTG 31304
||||||||| ||||| | ||| ||| ||||| || || ||| | || || | | |||
Sbjct 7642536 TACTCCAACATTGCCCCTGTAATCTGCATCTACAACGCCCGCGCCGATGTCGATGCCGTG 7642595
Query 31305 ATGCAAAGCTAGGCCAGATCGTGGAGCAATTCTTCCATAGCAGCCCTCAGGAATAACAAG 31364
| |||||| | ||||||||| || ||||| | ||||||||||| |||||| | |||
Sbjct 7642596 CTTCAAAGCCAAGCCAGATCGAGGTGCAATGCGACCATAGCAGCCGACAGGAACAGCAAT 7642655
Query 31365 CTGTAAGTCTGT 31376
|| | ||| ||
Sbjct 7642656 TTGAATGTCAGT 7642667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 107072873050378
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |