Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20spiralis_20[refseq_20GCF_5F000181795.1_202011-01-11]
6,863 sequences; 63,525,422 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq5 82.4 7e-11
>seq5
Length=5663831
Score = 82.4 bits (90), Expect = 7e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 45207 AGATGTACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAA 45266
|| ||||| | | ||| || || ||||| |||||| | | |||||| |||| || ||||
Sbjct 1930650 AGGTGTACAACAGTGAAAATCCGTTCGACTTTATGGAAATGATTTCGCTGGAAGGTAAAA 1930709
Query 45267 CTAAtttttttGAGAAACGCGTCGGCGAATACAAG 45301
| || ||||| || |||||||||||||||||| ||
Sbjct 1930710 CGAACTTTTTCGAAAAACGCGTCGGCGAATACCAG 1930744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433794113205196
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |