Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20spiralis_20[refseq_20GCF_5F000181795.1_202011-01-11]
6,863 sequences; 63,525,422 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq5 82.4 7e-11
>seq5
Length=5663831
Score = 82.4 bits (90), Expect = 7e-11
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 13357 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCC 13416
|| || ||| ||| || ||||| | || | |||||| |||||||| ||||||||||||
Sbjct 1930758 ATCACTCCCGCTTTCTGGTATTCGCCGACGCGTTTTTCGAAAAAGTTCGTTTTACCTTCC 1930699
Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTT 13449
|| || || |||||||||| ||||| ||||||
Sbjct 1930698 AGCGAAATCATTTCCATAAAGTCGAACGGATTT 1930666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478547743063320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |