Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20spiralis_20[refseq_20GCF_5F000181795.1_202011-01-11]
6,863 sequences; 63,525,422 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 3e-19
seq3296 98.7 2e-15
seq4763 93.3 8e-14
seq3435 93.3 8e-14
seq5152 89.7 9e-13
seq3072 86.0 1e-11
>seq1
Length=3447954
Score = 111 bits (122), Expect = 3e-19
Identities = 112/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || || || || | |||||| || || || |||||||||||||| || ||||| ||
Sbjct 863448 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 863389
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
|| || |||||||||||||| || ||| ||||| | || || |||||||| ||
Sbjct 863388 CTTTTAACATTCTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 863329
Query 68439 AGGGTCTTGACGAATATCTGCATTAT 68464
|| ||||| |||||||||||||| ||
Sbjct 863328 AGTGTCTTCACGAATATCTGCATAAT 863303
Score = 105 bits (116), Expect = 1e-17
Identities = 100/125 (80%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 68339 TTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG-ACGGCCTCGATGG 68397
|||||| || |||||||| || || || |||||||| |||||||| || || ||||
Sbjct 787063 TTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAAT-TTTGCCTTTCACATTTTCTATGG 787005
Query 68398 TGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCT 68457
| || | || |||||||||||||||||| ||||| || ||||||||||| || || || |
Sbjct 787004 TATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTGAGGGTCTTAACAAAAATTT 786945
Query 68458 GCATT 68462
|||||
Sbjct 786944 GCATT 786940
Score = 104 bits (114), Expect = 4e-17
Identities = 115/151 (76%), Gaps = 2/151 (1%)
Strand=Plus/Minus
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|||||||| || || || || | | |||||| || |||||||| || || || ||||||
Sbjct 850350 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGA 850291
Query 68373 ATCTTTGCCTTG-ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431
|| |||||||| || || || || || | || |||||||||||| || || |||||
Sbjct 850290 AT-TTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTT 850232
Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||| || |||||||| || || || ||||||
Sbjct 850231 TCCAGTAAGGGTCTTAACAAAAATTTGCATT 850201
Score = 100 bits (110), Expect = 5e-16
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || ||||| | | |||||| || |||||||| |||||||| || || || ||
Sbjct 793163 CTTACCAGCAAATATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTT 793104
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
|||| || ||| || || || | || ||| |||||||||||||| ||||| || ||
Sbjct 793103 GCCCTTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGT 793044
Query 68438 GAGGGTCTTGACGAATATCTGCATT 68462
|| ||||| || || || ||||||
Sbjct 793043 AAGAGTCTTAACAAAAATTTGCATT 793019
Score = 100 bits (110), Expect = 5e-16
Identities = 115/152 (76%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371
||||||||| || || || || | | ||||| || |||||||| || || || |||||
Sbjct 889586 TAACTGCTTACCAGCAAAAATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCTTG 889527
Query 68372 AATCTTTGCCTTG-ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430
||| |||||||| || || || || || | || |||||||||||| || || ||||
Sbjct 889526 AAT-TTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTT 889468
Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||| || |||||||| || || || ||||||
Sbjct 889467 TTCCAGTAAGGGTCTTAACAAAAATTTGCATT 889436
Score = 98.7 bits (108), Expect = 2e-15
Identities = 96/124 (77%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 68339 TTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGT 68398
|||||| || || ||||| |||||||| || || || || |||| || ||| || ||
Sbjct 786773 TTGTTGATCTGGCGGAATTCCTTCCTTATCCTGTATTTTGCCCTTTACATTCTCTATTGT 786714
Query 68399 GTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTG 68458
|| | || |||||||||||||||||| ||||| || ||||| ||||| || || || ||
Sbjct 786713 ATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTGAGAGTCTTAACAAAAATTTG 786654
Query 68459 CATT 68462
||||
Sbjct 786653 CATT 786650
Score = 98.7 bits (108), Expect = 2e-15
Identities = 113/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || || || || | |||||| ||||||||||| || || || || ||||| ||
Sbjct 849380 CTTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTT 849321
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
|||| || || || ||||||| | || ||||||| || |||||||| || ||
Sbjct 849320 ACCCTTCACATTTTCAATTGTGTCTGAGGGCTCCACTTCCAGTGTAATGGTTTTCCCAGT 849261
Query 68438 GAGGGTCTTGACGAATATCTGCATTATGCTAT 68469
|| || ||||| |||||||||||| ||| ||
Sbjct 849260 CAGAGTTTTGACAAATATCTGCATTTTGCGAT 849229
Score = 98.7 bits (108), Expect = 2e-15
Identities = 113/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || || || || | |||||| ||||||||||| || || || || ||||| ||
Sbjct 888615 CTTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTT 888556
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
|||| || || || ||||||| | || ||||||| || |||||||| || ||
Sbjct 888555 ACCCTTCACATTTTCAATTGTGTCTGAGGGCTCCACTTCCAGTGTAATGGTTTTCCCAGT 888496
Query 68438 GAGGGTCTTGACGAATATCTGCATTATGCTAT 68469
|| || ||||| |||||||||||| ||| ||
Sbjct 888495 CAGAGTTTTGACAAATATCTGCATTTTGCGAT 888464
Score = 96.9 bits (106), Expect = 6e-15
Identities = 108/142 (76%), Gaps = 2/142 (1%)
Strand=Plus/Minus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| || || || || | ||| || || |||||||| || || || || || || ||||||
Sbjct 840150 CCAGCAAAAATCAGACGTTGCTGATCCGGTGGAATTCCCTCTTTATCCTGTAT-TTTGCC 840092
Query 68382 TTG-ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAG 68440
|| || || || || || | || |||||||||||||||||||||||| || |||||
Sbjct 840091 TTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATGGTTTTGCCGGTGAG 840032
Query 68441 GGTCTTGACGAATATCTGCATT 68462
|||||| || || || ||||||
Sbjct 840031 GGTCTTAACAAAAATTTGCATT 840010
Score = 96.9 bits (106), Expect = 6e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || || ||||| | || ||| || || |||||||||||||| ||||||||||| ||
Sbjct 864131 TTACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGAATTTTA 864072
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
|| ||| || || || || | || ||||||||||| ||||| |||||||| ||
Sbjct 864071 CTTTTCACGTTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTT 864012
Query 68439 AGGGTCTTGACGAATATCTGCAT 68461
| || || || || ||||||||
Sbjct 864011 AATGTTTTCACAAAAATCTGCAT 863989
Score = 93.3 bits (102), Expect = 8e-14
Identities = 95/124 (77%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 68339 TTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGT 68398
|||||| || || ||||| |||||||| || || || || |||| || ||| || ||
Sbjct 787341 TTGTTGATCTGGCGGAATTCCTTCCTTATCCTGTATTTTGCCCTTTACATTCTCTATTGT 787282
Query 68399 GTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTG 68458
|| | || ||| |||||||||||||| ||||| || || |||||||| || || || ||
Sbjct 787281 ATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAAGGGTCTTAACAAAAATTTG 787222
Query 68459 CATT 68462
||||
Sbjct 787221 CATT 787218
Score = 93.3 bits (102), Expect = 8e-14
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| || || || || | ||| || ||||| ||||| || || || ||||||||||| |
Sbjct 793447 CCAGCAAAAATCAGACGTTGCTGATCGGGAGGAATTCCCTCTTTATCTTGAATCTTCCCT 793388
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || ||| | || || | || ||| |||||||| ||||||||||| || || |||
Sbjct 793387 TTTACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTTTTCCCAGTTAGG 793328
Query 68442 GTCTTGACGAATATCTGCATT 68462
||||| || || || ||||||
Sbjct 793327 GTCTTAACAAAAATTTGCATT 793307
Score = 93.3 bits (102), Expect = 8e-14
Identities = 97/125 (78%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 68339 TTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG-ACGGCCTCGATGG 68397
|||||| || |||||||| ||||| || |||||||| |||||||| || || || |
Sbjct 798670 TTGTTGATCCGGTGGAATTCCTTCTTTATCTTGAAT-TTTGCCTTTCACATTTTCTATTG 798612
Query 68398 TGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCT 68457
| || | || ||| |||||||||||||| ||||| || || || ||||| || || || |
Sbjct 798611 TATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAAGAGTCTTAACAAAAATTT 798552
Query 68458 GCATT 68462
|||||
Sbjct 798551 GCATT 798547
Score = 87.8 bits (96), Expect = 3e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| || || || || | ||| || || || ||||| || || || ||||||||||| |
Sbjct 758696 CCAGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCCTCTTTATCTTGAATCTTCCCT 758637
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || ||| | || || | || ||| |||||||| ||||||||||| || || |||
Sbjct 758636 TTCACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTTTTCCCAGTTAGG 758577
Query 68442 GTCTTGACGAATATCTGCATT 68462
||||| || || || ||||||
Sbjct 758576 GTCTTAACAAAAATTTGCATT 758556
Score = 87.8 bits (96), Expect = 3e-12
Identities = 94/122 (77%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371
||||||||| || || || || | | |||||| || |||||||| || || || |||||
Sbjct 792886 TAACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTG 792827
Query 68372 AATCTTTGCCTTG-ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430
||| |||||||| || || || || || | || |||||||||||||||||| ||||
Sbjct 792826 AAT-TTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTT 792768
Query 68431 TT 68432
||
Sbjct 792767 TT 792766
Score = 87.8 bits (96), Expect = 3e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| || || || || | |||||| || |||||||| |||||||| || || || || |
Sbjct 816545 CCAGCAAAAATCAGACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTCCCT 816486
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || || || || || | || ||| |||||||||||||| ||||| || || ||
Sbjct 816485 TTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAAGA 816426
Query 68442 GTCTTGACGAATATCTGCATT 68462
||||| || || || ||||||
Sbjct 816425 GTCTTAACAAAAATTTGCATT 816405
Score = 86.0 bits (94), Expect = 1e-11
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| ||||| || || || | || || ||||||||||| || || || || ||||| ||
Sbjct 814243 CTTACCGGCAAAAATCAGACGCTGCTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTT 814184
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
| || || || || | ||||| | ||| ||||||| || |||||||| || ||
Sbjct 814183 ACCTTTCACATTTTCAATTGAGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCCAGT 814124
Query 68438 GAGGGTCTTGACGAATATCTGCATT 68462
|| || ||||| ||||||||||||
Sbjct 814123 CAGAGTTTTGACAAATATCTGCATT 814099
Score = 86.0 bits (94), Expect = 1e-11
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || || || || | ||||| ||||||||||| || || || || ||||| ||
Sbjct 839189 CTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTT 839130
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
| || || || || | ||||| | ||| ||||||| || |||||||| || ||
Sbjct 839129 ACCTTTCACATTTTCAATTGAGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCCAGT 839070
Query 68438 GAGGGTCTTGACGAATATCTGCATT 68462
|| || ||||| ||||||||||||
Sbjct 839069 CAGAGTTTTGACAAATATCTGCATT 839045
>seq3296
Length=842
Score = 98.7 bits (108), Expect = 2e-15
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 68336 TCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGAT 68395
|||||| || || || |||||||||||||| || ||||| || || || ||||||
Sbjct 424 TCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTACTTTTAACATTCTCGAT 483
Query 68396 GGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455
|||||||| || ||| ||||| | || || |||||||| || || ||||| ||||||||
Sbjct 484 GGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTAAGTGTCTTCACGAATAT 543
Query 68456 CTGCATTAT 68464
|||| ||
Sbjct 544 AAGCATAAT 552
>seq4763
Length=1852
Score = 93.3 bits (102), Expect = 8e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || || ||||| | || ||| || || |||||||||||||| ||||||||||| ||
Sbjct 1619 TTACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGAATTTTA 1678
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
|| ||| || || ||||| | | ||||| ||||| ||||| |||||||| ||
Sbjct 1679 CTTTTCACGTTTTCAATCGTGTCCGAAGGCTCTACCTCCAATGTGATTGTTTTTCCAGTT 1738
Query 68439 AGGGTCTTGACGAATATCTGCATT 68462
| || || || || |||||||||
Sbjct 1739 AATGTTTTCACAAAAATCTGCATT 1762
>seq3435
Length=827
Score = 93.3 bits (102), Expect = 8e-14
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| || ||||| | || ||| || || || |||||||||||||| |||||||| ||
Sbjct 446 CCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAATTTTACTT 505
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || || || ||||||| | ||||| ||||| ||||| |||||||| || |
Sbjct 506 TTCACATTTTCAATCGTGTCTGAAGGCTCTACCTCCAATGTGATTGTTTTTCCAGTTAAT 565
Query 68442 GTCTTGACGAATATCTGCATT 68462
|| || ||||| |||||||||
Sbjct 566 GTTTTCACGAAAATCTGCATT 586
>seq5152
Length=332
Score = 89.7 bits (98), Expect = 9e-13
Identities = 97/125 (78%), Gaps = 4/125 (3%)
Strand=Plus/Plus
Query 68339 TTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG-ACGGCCTCGATGG 68397
|||||| || |||||||| || || || |||||||| |||||||| || || || |
Sbjct 207 TTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAAT-TTTGCCTTTCACATTTTCTATTG 265
Query 68398 TGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCT 68457
| || | || |||||||||||||||||| |||| |||||| |||||| || || || |
Sbjct 266 TATCAGATGGTTCTACTTCCAAGGTGAT--CTTTTGCCGTGAAGGTCTTAACAAAAATTT 323
Query 68458 GCATT 68462
|||||
Sbjct 324 GCATT 328
>seq3072
Length=446
Score = 86.0 bits (94), Expect = 1e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| || ||||| | || ||| || || || |||||||||||||| |||||||| ||
Sbjct 235 CCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAATTTTACTT 176
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || || || || || | || ||||||||||| ||||| |||||||| || |
Sbjct 175 TTCACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTAAT 116
Query 68442 GTCTTGACGAATATCTGCAT 68461
|| || || || ||||||||
Sbjct 115 GTTTTCACAAAAATCTGCAT 96
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921543336318360
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