Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20spiralis_20[refseq_20GCF_5F000181795.1_202011-01-11]
6,863 sequences; 63,525,422 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 3e-27
seq3072 125 6e-24
seq5152 116 3e-21
seq3435 116 3e-21
seq4763 114 1e-20
seq3791 93.3 3e-14
seq3296 82.4 6e-11
>seq1
Length=3447954
Score = 136 bits (150), Expect = 3e-27
Identities = 120/150 (80%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
||||| |||||| |||||||||||||| |||||||| || ||||| ||||| ||||| ||
Sbjct 793169 CAATTACTTACCAGCAAATATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTG 793110
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
||||| |||||| | |||| || ||||| | ||||||||| | |||| ||||||
Sbjct 793109 TATTTTGCCCTTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTT 793050
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||||| | ||| || ||||| || |||||
Sbjct 793049 GCCGGTAAGAGTCTTAACAAAAATTTGCAT 793020
Score = 134 bits (148), Expect = 1e-26
Identities = 118/147 (80%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382
|| |||||| ||||| |||| ||||||||||||||| ||||| || |||||||| |||||
Sbjct 839192 TTACTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAAT 839133
Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442
||| ||| ||| |||| | | ||| || | ||||||||| ||||| | ||||| ||
Sbjct 839132 TTTACCTTTCACATTTTCAATTGAGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCC 839073
Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | |||||| ||||||||||||||
Sbjct 839072 AGTCAGAGTTTTGACAAATATCTGCAT 839046
Score = 131 bits (144), Expect = 1e-25
Identities = 113/140 (81%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 101330 CCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 101389
|| || || |||||||| |||||||| || ||||| |||||||||||||||||||| |
Sbjct 798687 CCAGCTAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCTTTATCTTGAATTTTGCCT 798628
Query 101390 TTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAA 101449
|| ||| |||||| || ||||| | ||||||||| | |||| |||||||||||| | |
Sbjct 798627 TTCACATTTTCTATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAAGA 798568
Query 101450 GTTTTTACAAATATCTGCAT 101469
|| || ||||| || |||||
Sbjct 798567 GTCTTAACAAAAATTTGCAT 798548
Score = 131 bits (144), Expect = 1e-25
Identities = 117/147 (80%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382
|| |||||| ||||| |||| |||||| |||||||| ||||| || |||||||| |||||
Sbjct 814246 TTACTTACCGGCAAAAATCAGACGCTGCTGATCGGGTGGAATTCCCTCTTTATCCTGAAT 814187
Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442
||| ||| ||| |||| | | ||| || | ||||||||| ||||| | ||||| ||
Sbjct 814186 TTTACCTTTCACATTTTCAATTGAGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCC 814127
Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | |||||| ||||||||||||||
Sbjct 814126 AGTCAGAGTTTTGACAAATATCTGCAT 814100
Score = 127 bits (140), Expect = 2e-24
Identities = 114/143 (80%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| ||||| |||||||| |||||||| || ||||| || |||||||||||||||||
Sbjct 787083 TTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTG 787024
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| |||||| || ||||| | ||| ||||| | |||| ||||||||||||
Sbjct 787023 CCTTTCACATTTTCTATGGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTG 786964
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || ||||| || |||||
Sbjct 786963 AGGGTCTTAACAAAAATTTGCAT 786941
Score = 125 bits (138), Expect = 6e-24
Identities = 117/149 (79%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
|| |||||||| ||||| ||||||||||||||||| || ||||| || ||||||||||||
Sbjct 889585 AACTGCTTACCAGCAAAAATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCTTGA 889526
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
||||| ||| ||| |||||| || ||||| | ||| ||||| | ||| | |||||
Sbjct 889525 ATTTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTT 889466
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | || || ||||| || |||||
Sbjct 889465 CCAGTAAGGGTCTTAACAAAAATTTGCAT 889437
Score = 122 bits (134), Expect = 7e-23
Identities = 112/142 (79%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||| |||||||| |||||||| |||||||| ||||| ||||| || |||||
Sbjct 786792 TACCAGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCCTGTATTTTGC 786733
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
|||||| | |||| || ||||| | ||| ||||| | |||| |||||||||||| |
Sbjct 786732 CCTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTGA 786673
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
||| || ||||| || |||||
Sbjct 786672 GAGTCTTAACAAAAATTTGCAT 786651
Score = 122 bits (134), Expect = 7e-23
Identities = 112/142 (79%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||| |||||||| |||||||| |||||||| ||||| ||||| || |||||
Sbjct 787360 TACCAGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCCTGTATTTTGC 787301
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
|||||| | |||| || ||||| | ||||||||| | |||| |||||||||||| |
Sbjct 787300 CCTTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAA 787241
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
|| || ||||| || |||||
Sbjct 787240 GGGTCTTAACAAAAATTTGCAT 787219
Score = 122 bits (134), Expect = 7e-23
Identities = 114/145 (79%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384
|| |||| ||||| || | ||||||||||| || || ||||||||||| |||||||| |
Sbjct 839522 GCATACCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCTTGAATCT 839463
Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444
| ||||||| |||| | || || |||| || |||||||| || | |||||| || |
Sbjct 839462 TGCTTTTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTG 839403
Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469
| || ||||| ||||||||||||||
Sbjct 839402 TCAACGTTTTCACAAATATCTGCAT 839378
Score = 122 bits (134), Expect = 7e-23
Identities = 115/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382
|| |||||| ||||| |||| ||| ||||||||||| ||||| || |||||||| |||||
Sbjct 849383 TTACTTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAAT 849324
Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442
||| || ||| |||| | ||||| || | |||||||| || || | ||||| ||
Sbjct 849323 TTTACCCTTCACATTTTCAATTGTGTCTGAGGGCTCCACTTCCAGTGTAATGGTTTTCCC 849264
Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | |||||| ||||||||||||||
Sbjct 849263 AGTCAGAGTTTTGACAAATATCTGCAT 849237
Score = 122 bits (134), Expect = 7e-23
Identities = 115/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382
|| |||||| ||||| |||| ||| ||||||||||| ||||| || |||||||| |||||
Sbjct 888618 TTACTTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAAT 888559
Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442
||| || ||| |||| | ||||| || | |||||||| || || | ||||| ||
Sbjct 888558 TTTACCCTTCACATTTTCAATTGTGTCTGAGGGCTCCACTTCCAGTGTAATGGTTTTCCC 888499
Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | |||||| ||||||||||||||
Sbjct 888498 AGTCAGAGTTTTGACAAATATCTGCAT 888472
Score = 120 bits (132), Expect = 2e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
|| |||||||| ||||| |||||||| |||||||| || ||||| || ||||||||||||
Sbjct 850350 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGA 850291
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
||||| ||| ||| |||||| || ||||| | ||| ||||| | ||| | |||||
Sbjct 850290 ATTTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTT 850231
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | || || ||||| || |||||
Sbjct 850230 CCAGTAAGGGTCTTAACAAAAATTTGCAT 850202
Score = 118 bits (130), Expect = 8e-22
Identities = 113/145 (78%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384
|| |||| ||||| || | ||||||||||| || || ||||||||||| || ||||| |
Sbjct 814576 GCATACCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCT 814517
Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444
| ||||||| |||| | || || |||| || |||||||| || | |||||| || |
Sbjct 814516 TGCTTTTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTG 814457
Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469
| || ||||| ||||||||||||||
Sbjct 814456 TCAACGTTTTCACAAATATCTGCAT 814432
Score = 118 bits (130), Expect = 8e-22
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||| |||| ||| |||||||| || ||||| ||||| ||||| || |||||
Sbjct 816547 TACCAGCAAAAATCAGACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTCC 816488
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| ||| |||| | || ||||| | ||||||||| | |||| |||||||||||| |
Sbjct 816487 CTTTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAA 816428
Query 101448 AAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482
||| || ||||| || ||||| ||||||||
Sbjct 816427 GAGTCTTAACAAAAATTTGCATTCCACCGCGAAGA 816393
Score = 118 bits (130), Expect = 8e-22
Identities = 113/145 (78%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384
|| |||| ||||| || | ||||||||||| || || ||||||||||| || ||||| |
Sbjct 849713 GCATACCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCT 849654
Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444
| ||||||| |||| | || || |||| || |||||||| || | |||||| || |
Sbjct 849653 TGCTTTTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTG 849594
Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469
| || ||||| ||||||||||||||
Sbjct 849593 TCAACGTTTTCACAAATATCTGCAT 849569
Score = 118 bits (130), Expect = 8e-22
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| ||||||||||| || || ||||| || |||||||||||||| |||||||||||
Sbjct 864131 TTACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGAATTTTA 864072
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| || |||| | || ||||| | || ||||| | |||| ||||| || |||
Sbjct 864071 CTTTTCACGTTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTT 864012
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| ||||| ||||| ||||||||
Sbjct 864011 AATGTTTTCACAAAAATCTGCAT 863989
Score = 116 bits (128), Expect = 3e-21
Identities = 111/142 (78%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||| |||| ||| || |||||||| ||||| || |||||||||||||| ||
Sbjct 793449 TACCAGCAAAAATCAGACGTTGCTGATCGGGAGGAATTCCCTCTTTATCTTGAATCTTCC 793390
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||||||| | || ||||| ||||| | ||||||||| | |||| ||||| || ||||
Sbjct 793389 CTTTTACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTTTTCCCAGTTA 793330
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
|| || ||||| || |||||
Sbjct 793329 GGGTCTTAACAAAAATTTGCAT 793308
Score = 114 bits (126), Expect = 1e-20
Identities = 119/152 (78%), Gaps = 3/152 (2%)
Strand=Plus/Minus
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
||||| | |||| |||||||||||||| |||||||| || ||||| ||||||||||| ||
Sbjct 758418 CAATTACGTACCAGCAAATATCAAACGTTGTTGATCCGGTGGAATACCTTCTTTATCCTG 758359
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGA-CGTTTCCACTTCAAGAGTGACCGTTT 101438
||||| |||||| | |||| || ||||| || |||||||| |||| |||||
Sbjct 758358 TATTTTGCCCTTTACATTCTCTATCGTATCAGATGGTATCCACTTCCCACGTGATCGTTT 758299
Query 101439 TGCCGGTTAAAGTTTTTACAAA-TATCTGCAT 101469
|||||| | ||| | ||||||| || |||||
Sbjct 758298 TGCCGGGT-AAGGTCTTACAAAGAATTTGCAT 758268
Score = 113 bits (124), Expect = 4e-20
Identities = 112/145 (77%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384
|| |||| ||||| || | ||||||||||| || || ||||||||||| || ||||| |
Sbjct 888948 GCATACCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCT 888889
Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444
| ||||||| |||| | || || |||| || |||||||| || | |||||| || |
Sbjct 888888 TGCTTTTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTG 888829
Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469
| || ||||| |||||||| |||||
Sbjct 888828 TCAACGTTTTCACAAATATTTGCAT 888804
Score = 111 bits (122), Expect = 1e-19
Identities = 96/119 (81%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
|| |||||||| ||||| |||||||| |||||||| || ||||| || ||||||||||||
Sbjct 792885 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGA 792826
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
||||| ||| ||| |||||| || ||||| | ||| ||||| | |||| ||||||
Sbjct 792825 ATTTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTT 792767
Score = 107 bits (118), Expect = 2e-18
Identities = 109/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||| |||| ||| || ||||| || ||||| || |||||||||||||| ||
Sbjct 758698 TACCAGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCCTCTTTATCTTGAATCTTCC 758639
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| ||| | || ||||| ||||| | ||||||||| | |||| ||||| || ||||
Sbjct 758638 CTTTCACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTTTTCCCAGTTA 758579
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
|| || ||||| || |||||
Sbjct 758578 GGGTCTTAACAAAAATTTGCAT 758557
Score = 104 bits (114), Expect = 2e-17
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||| |||| ||| || ||||| || ||||| || |||||||| || |||||
Sbjct 840152 TACCAGCAAAAATCAGACGTTGCTGATCCGGTGGAATTCCCTCTTTATCCTGTATTTTGC 840093
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| ||| |||||| || ||||| | ||| ||||| | |||| ||||||||||| |
Sbjct 840092 CTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATGGTTTTGCCGGTGA 840033
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
|| || ||||| || |||||
Sbjct 840032 GGGTCTTAACAAAAATTTGCAT 840011
Score = 96.9 bits (106), Expect = 3e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||||||||| || || | || ||||| || ||||||||||| ||||| ||||||||
Sbjct 863448 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 863389
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| | || | ||||| || | ||| ||||| || || | ||||| || ||
Sbjct 863388 CTTTTAACATTCTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 863329
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || || |||||||||||
Sbjct 863328 AGTGTCTTCACGAATATCTGCAT 863306
Score = 89.7 bits (98), Expect = 4e-13
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||| |||||||| |||||||| || ||||| || |||||||||||||||||
Sbjct 816263 TACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTGC 816204
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| || |||||| | ||||| | | |||| | ||||| | | || | || |
Sbjct 816203 CTTTCTCATTTTCTATTGAATCAGATGGGTGTACTTACAAAGTGATTGATCTGTCAGTAA 816144
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
||| || ||||| || |||||
Sbjct 816143 GAGTCTTAACAAAAATTTGCAT 816122
>seq3072
Length=446
Score = 125 bits (138), Expect = 6e-24
Identities = 113/142 (80%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||||||||| || || ||||| |||||||||||||| ||||||||||||||
Sbjct 237 TACCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAATTTTAC 178
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| ||| |||| | || ||||| | || ||||| | |||| ||||| || ||||
Sbjct 177 TTTTCACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTA 118
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
| ||||| ||||| ||||||||
Sbjct 117 ATGTTTTCACAAAAATCTGCAT 96
>seq5152
Length=332
Score = 116 bits (128), Expect = 3e-21
Identities = 113/143 (79%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| ||||| |||||||| |||||||| || ||||| || |||||||||||||||||
Sbjct 187 TTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTG 246
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| |||||| || ||||| | ||| ||||| | |||| | ||||||| ||
Sbjct 247 CCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATC-TTTTGCC-GTG 304
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| || || ||||| || |||||
Sbjct 305 AAGGTCTTAACAAAAATTTGCAT 327
>seq3435
Length=827
Score = 116 bits (128), Expect = 3e-21
Identities = 111/142 (78%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||||||||| || || ||||| |||||||||||||| ||||||||||||||
Sbjct 444 TACCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAATTTTAC 503
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| ||| |||| | ||||| || | || || || | |||| ||||| || ||||
Sbjct 504 TTTTCACATTTTCAATCGTGTCTGAAGGCTCTACCTCCAATGTGATTGTTTTTCCAGTTA 563
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
| ||||| || || ||||||||
Sbjct 564 ATGTTTTCACGAAAATCTGCAT 585
>seq4763
Length=1852
Score = 114 bits (126), Expect = 1e-20
Identities = 111/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| ||||||||||| || || ||||| || |||||||||||||| |||||||||||
Sbjct 1619 TTACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGAATTTTA 1678
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| || |||| | ||||| || | || || || | |||| ||||| || |||
Sbjct 1679 CTTTTCACGTTTTCAATCGTGTCCGAAGGCTCTACCTCCAATGTGATTGTTTTTCCAGTT 1738
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| ||||| ||||| ||||||||
Sbjct 1739 AATGTTTTCACAAAAATCTGCAT 1761
>seq3791
Length=500
Score = 93.3 bits (102), Expect = 3e-14
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||| |||| ||| || ||||| || ||||| ||||| ||||| || |||||
Sbjct 291 TACCAGCAAAAATCACACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTCC 350
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| ||| | |||| || ||||| | || ||||| | |||| |||||||||||| |
Sbjct 351 CTTTCACATTCTCTATTGTATCAGATGGCTCTACTTCTTGTGTGATCGTTTTGCCGGTAA 410
Query 101448 AAGTTTTTACA 101458
||| || |||
Sbjct 411 GAGTCTTAACA 421
>seq3296
Length=842
Score = 82.4 bits (90), Expect = 6e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||||||||| | || | || ||||| || ||||||||||| ||||| ||||||||
Sbjct 407 TTACCTGCAAAGACTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 466
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| | || | ||||| || | ||| ||||| || || | ||||| || ||
Sbjct 467 CTTTTAACATTCTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 526
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || || ||||| ||||
Sbjct 527 AGTGTCTTCACGAATATAAGCAT 549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396245254160091
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |