Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20spiralis_20[refseq_20GCF_5F000181795.1_202011-01-11] 6,863 sequences; 63,525,422 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1 136 3e-27 seq3072 125 6e-24 seq5152 116 3e-21 seq3435 116 3e-21 seq4763 114 1e-20 seq3791 93.3 3e-14 seq3296 82.4 6e-11 >seq1 Length=3447954 Score = 136 bits (150), Expect = 3e-27 Identities = 120/150 (80%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||||| |||||| |||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct 793169 CAATTACTTACCAGCAAATATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTG 793110 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||||| |||||| | |||| || ||||| | ||||||||| | |||| |||||| Sbjct 793109 TATTTTGCCCTTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTT 793050 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||| | ||| || ||||| || ||||| Sbjct 793049 GCCGGTAAGAGTCTTAACAAAAATTTGCAT 793020 Score = 134 bits (148), Expect = 1e-26 Identities = 118/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382 || |||||| ||||| |||| ||||||||||||||| ||||| || |||||||| ||||| Sbjct 839192 TTACTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAAT 839133 Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442 ||| ||| ||| |||| | | ||| || | ||||||||| ||||| | ||||| || Sbjct 839132 TTTACCTTTCACATTTTCAATTGAGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCC 839073 Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||||| |||||||||||||| Sbjct 839072 AGTCAGAGTTTTGACAAATATCTGCAT 839046 Score = 131 bits (144), Expect = 1e-25 Identities = 113/140 (81%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 101330 CCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 101389 || || || |||||||| |||||||| || ||||| |||||||||||||||||||| | Sbjct 798687 CCAGCTAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCTTTATCTTGAATTTTGCCT 798628 Query 101390 TTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAA 101449 || ||| |||||| || ||||| | ||||||||| | |||| |||||||||||| | | Sbjct 798627 TTCACATTTTCTATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAAGA 798568 Query 101450 GTTTTTACAAATATCTGCAT 101469 || || ||||| || ||||| Sbjct 798567 GTCTTAACAAAAATTTGCAT 798548 Score = 131 bits (144), Expect = 1e-25 Identities = 117/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382 || |||||| ||||| |||| |||||| |||||||| ||||| || |||||||| ||||| Sbjct 814246 TTACTTACCGGCAAAAATCAGACGCTGCTGATCGGGTGGAATTCCCTCTTTATCCTGAAT 814187 Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442 ||| ||| ||| |||| | | ||| || | ||||||||| ||||| | ||||| || Sbjct 814186 TTTACCTTTCACATTTTCAATTGAGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCC 814127 Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||||| |||||||||||||| Sbjct 814126 AGTCAGAGTTTTGACAAATATCTGCAT 814100 Score = 127 bits (140), Expect = 2e-24 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| |||||||| |||||||| || ||||| || ||||||||||||||||| Sbjct 787083 TTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTG 787024 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| |||||| || ||||| | ||| ||||| | |||| |||||||||||| Sbjct 787023 CCTTTCACATTTTCTATGGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTG 786964 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| || ||||| Sbjct 786963 AGGGTCTTAACAAAAATTTGCAT 786941 Score = 125 bits (138), Expect = 6e-24 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 || |||||||| ||||| ||||||||||||||||| || ||||| || |||||||||||| Sbjct 889585 AACTGCTTACCAGCAAAAATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCTTGA 889526 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||| ||| |||||| || ||||| | ||| ||||| | ||| | ||||| Sbjct 889525 ATTTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTT 889466 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || ||||| || ||||| Sbjct 889465 CCAGTAAGGGTCTTAACAAAAATTTGCAT 889437 Score = 122 bits (134), Expect = 7e-23 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| |||||||| |||||||| |||||||| ||||| ||||| || ||||| Sbjct 786792 TACCAGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCCTGTATTTTGC 786733 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 |||||| | |||| || ||||| | ||| ||||| | |||| |||||||||||| | Sbjct 786732 CCTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTGA 786673 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 ||| || ||||| || ||||| Sbjct 786672 GAGTCTTAACAAAAATTTGCAT 786651 Score = 122 bits (134), Expect = 7e-23 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| |||||||| |||||||| |||||||| ||||| ||||| || ||||| Sbjct 787360 TACCAGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCCTGTATTTTGC 787301 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 |||||| | |||| || ||||| | ||||||||| | |||| |||||||||||| | Sbjct 787300 CCTTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAA 787241 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 || || ||||| || ||||| Sbjct 787240 GGGTCTTAACAAAAATTTGCAT 787219 Score = 122 bits (134), Expect = 7e-23 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384 || |||| ||||| || | ||||||||||| || || ||||||||||| |||||||| | Sbjct 839522 GCATACCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCTTGAATCT 839463 Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444 | ||||||| |||| | || || |||| || |||||||| || | |||||| || | Sbjct 839462 TGCTTTTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTG 839403 Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469 | || ||||| |||||||||||||| Sbjct 839402 TCAACGTTTTCACAAATATCTGCAT 839378 Score = 122 bits (134), Expect = 7e-23 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382 || |||||| ||||| |||| ||| ||||||||||| ||||| || |||||||| ||||| Sbjct 849383 TTACTTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAAT 849324 Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442 ||| || ||| |||| | ||||| || | |||||||| || || | ||||| || Sbjct 849323 TTTACCCTTCACATTTTCAATTGTGTCTGAGGGCTCCACTTCCAGTGTAATGGTTTTCCC 849264 Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||||| |||||||||||||| Sbjct 849263 AGTCAGAGTTTTGACAAATATCTGCAT 849237 Score = 122 bits (134), Expect = 7e-23 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382 || |||||| ||||| |||| ||| ||||||||||| ||||| || |||||||| ||||| Sbjct 888618 TTACTTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAAT 888559 Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442 ||| || ||| |||| | ||||| || | |||||||| || || | ||||| || Sbjct 888558 TTTACCCTTCACATTTTCAATTGTGTCTGAGGGCTCCACTTCCAGTGTAATGGTTTTCCC 888499 Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||||| |||||||||||||| Sbjct 888498 AGTCAGAGTTTTGACAAATATCTGCAT 888472 Score = 120 bits (132), Expect = 2e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 || |||||||| ||||| |||||||| |||||||| || ||||| || |||||||||||| Sbjct 850350 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGA 850291 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||| ||| |||||| || ||||| | ||| ||||| | ||| | ||||| Sbjct 850290 ATTTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTT 850231 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || ||||| || ||||| Sbjct 850230 CCAGTAAGGGTCTTAACAAAAATTTGCAT 850202 Score = 118 bits (130), Expect = 8e-22 Identities = 113/145 (78%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384 || |||| ||||| || | ||||||||||| || || ||||||||||| || ||||| | Sbjct 814576 GCATACCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCT 814517 Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444 | ||||||| |||| | || || |||| || |||||||| || | |||||| || | Sbjct 814516 TGCTTTTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTG 814457 Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469 | || ||||| |||||||||||||| Sbjct 814456 TCAACGTTTTCACAAATATCTGCAT 814432 Score = 118 bits (130), Expect = 8e-22 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| |||| ||| |||||||| || ||||| ||||| ||||| || ||||| Sbjct 816547 TACCAGCAAAAATCAGACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTCC 816488 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| |||| | || ||||| | ||||||||| | |||| |||||||||||| | Sbjct 816487 CTTTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAA 816428 Query 101448 AAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 ||| || ||||| || ||||| |||||||| Sbjct 816427 GAGTCTTAACAAAAATTTGCATTCCACCGCGAAGA 816393 Score = 118 bits (130), Expect = 8e-22 Identities = 113/145 (78%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384 || |||| ||||| || | ||||||||||| || || ||||||||||| || ||||| | Sbjct 849713 GCATACCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCT 849654 Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444 | ||||||| |||| | || || |||| || |||||||| || | |||||| || | Sbjct 849653 TGCTTTTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTG 849594 Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469 | || ||||| |||||||||||||| Sbjct 849593 TCAACGTTTTCACAAATATCTGCAT 849569 Score = 118 bits (130), Expect = 8e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||||||||| || || ||||| || |||||||||||||| ||||||||||| Sbjct 864131 TTACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGAATTTTA 864072 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| || |||| | || ||||| | || ||||| | |||| ||||| || ||| Sbjct 864071 CTTTTCACGTTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTT 864012 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || ||||| ||||| |||||||| Sbjct 864011 AATGTTTTCACAAAAATCTGCAT 863989 Score = 116 bits (128), Expect = 3e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| |||| ||| || |||||||| ||||| || |||||||||||||| || Sbjct 793449 TACCAGCAAAAATCAGACGTTGCTGATCGGGAGGAATTCCCTCTTTATCTTGAATCTTCC 793390 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||||||| | || ||||| ||||| | ||||||||| | |||| ||||| || |||| Sbjct 793389 CTTTTACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTTTTCCCAGTTA 793330 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 || || ||||| || ||||| Sbjct 793329 GGGTCTTAACAAAAATTTGCAT 793308 Score = 114 bits (126), Expect = 1e-20 Identities = 119/152 (78%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||||| | |||| |||||||||||||| |||||||| || ||||| ||||||||||| || Sbjct 758418 CAATTACGTACCAGCAAATATCAAACGTTGTTGATCCGGTGGAATACCTTCTTTATCCTG 758359 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGA-CGTTTCCACTTCAAGAGTGACCGTTT 101438 ||||| |||||| | |||| || ||||| || |||||||| |||| ||||| Sbjct 758358 TATTTTGCCCTTTACATTCTCTATCGTATCAGATGGTATCCACTTCCCACGTGATCGTTT 758299 Query 101439 TGCCGGTTAAAGTTTTTACAAA-TATCTGCAT 101469 |||||| | ||| | ||||||| || ||||| Sbjct 758298 TGCCGGGT-AAGGTCTTACAAAGAATTTGCAT 758268 Score = 113 bits (124), Expect = 4e-20 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384 || |||| ||||| || | ||||||||||| || || ||||||||||| || ||||| | Sbjct 888948 GCATACCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCT 888889 Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444 | ||||||| |||| | || || |||| || |||||||| || | |||||| || | Sbjct 888888 TGCTTTTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTG 888829 Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469 | || ||||| |||||||| ||||| Sbjct 888828 TCAACGTTTTCACAAATATTTGCAT 888804 Score = 111 bits (122), Expect = 1e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 || |||||||| ||||| |||||||| |||||||| || ||||| || |||||||||||| Sbjct 792885 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGA 792826 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||||| ||| ||| |||||| || ||||| | ||| ||||| | |||| |||||| Sbjct 792825 ATTTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTT 792767 Score = 107 bits (118), Expect = 2e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| |||| ||| || ||||| || ||||| || |||||||||||||| || Sbjct 758698 TACCAGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCCTCTTTATCTTGAATCTTCC 758639 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| | || ||||| ||||| | ||||||||| | |||| ||||| || |||| Sbjct 758638 CTTTCACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTTTTCCCAGTTA 758579 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 || || ||||| || ||||| Sbjct 758578 GGGTCTTAACAAAAATTTGCAT 758557 Score = 104 bits (114), Expect = 2e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| |||| ||| || ||||| || ||||| || |||||||| || ||||| Sbjct 840152 TACCAGCAAAAATCAGACGTTGCTGATCCGGTGGAATTCCCTCTTTATCCTGTATTTTGC 840093 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| |||||| || ||||| | ||| ||||| | |||| ||||||||||| | Sbjct 840092 CTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATGGTTTTGCCGGTGA 840033 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 || || ||||| || ||||| Sbjct 840032 GGGTCTTAACAAAAATTTGCAT 840011 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||||||||| || || | || ||||| || ||||||||||| ||||| |||||||| Sbjct 863448 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 863389 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | ||||| || | ||| ||||| || || | ||||| || || Sbjct 863388 CTTTTAACATTCTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 863329 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || ||||||||||| Sbjct 863328 AGTGTCTTCACGAATATCTGCAT 863306 Score = 89.7 bits (98), Expect = 4e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| |||||||| |||||||| || ||||| || ||||||||||||||||| Sbjct 816263 TACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTGC 816204 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| || |||||| | ||||| | | |||| | ||||| | | || | || | Sbjct 816203 CTTTCTCATTTTCTATTGAATCAGATGGGTGTACTTACAAAGTGATTGATCTGTCAGTAA 816144 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 ||| || ||||| || ||||| Sbjct 816143 GAGTCTTAACAAAAATTTGCAT 816122 >seq3072 Length=446 Score = 125 bits (138), Expect = 6e-24 Identities = 113/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||||||||| || || ||||| |||||||||||||| |||||||||||||| Sbjct 237 TACCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAATTTTAC 178 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| |||| | || ||||| | || ||||| | |||| ||||| || |||| Sbjct 177 TTTTCACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTA 118 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 | ||||| ||||| |||||||| Sbjct 117 ATGTTTTCACAAAAATCTGCAT 96 >seq5152 Length=332 Score = 116 bits (128), Expect = 3e-21 Identities = 113/143 (79%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| |||||||| |||||||| || ||||| || ||||||||||||||||| Sbjct 187 TTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTG 246 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| |||||| || ||||| | ||| ||||| | |||| | ||||||| || Sbjct 247 CCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATC-TTTTGCC-GTG 304 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || ||||| || ||||| Sbjct 305 AAGGTCTTAACAAAAATTTGCAT 327 >seq3435 Length=827 Score = 116 bits (128), Expect = 3e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||||||||| || || ||||| |||||||||||||| |||||||||||||| Sbjct 444 TACCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAATTTTAC 503 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| |||| | ||||| || | || || || | |||| ||||| || |||| Sbjct 504 TTTTCACATTTTCAATCGTGTCTGAAGGCTCTACCTCCAATGTGATTGTTTTTCCAGTTA 563 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 | ||||| || || |||||||| Sbjct 564 ATGTTTTCACGAAAATCTGCAT 585 >seq4763 Length=1852 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||||||||| || || ||||| || |||||||||||||| ||||||||||| Sbjct 1619 TTACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGAATTTTA 1678 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| || |||| | ||||| || | || || || | |||| ||||| || ||| Sbjct 1679 CTTTTCACGTTTTCAATCGTGTCCGAAGGCTCTACCTCCAATGTGATTGTTTTTCCAGTT 1738 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || ||||| ||||| |||||||| Sbjct 1739 AATGTTTTCACAAAAATCTGCAT 1761 >seq3791 Length=500 Score = 93.3 bits (102), Expect = 3e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| |||| ||| || ||||| || ||||| ||||| ||||| || ||||| Sbjct 291 TACCAGCAAAAATCACACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTCC 350 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| | |||| || ||||| | || ||||| | |||| |||||||||||| | Sbjct 351 CTTTCACATTCTCTATTGTATCAGATGGCTCTACTTCTTGTGTGATCGTTTTGCCGGTAA 410 Query 101448 AAGTTTTTACA 101458 ||| || ||| Sbjct 411 GAGTCTTAACA 421 >seq3296 Length=842 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||||||||| | || | || ||||| || ||||||||||| ||||| |||||||| Sbjct 407 TTACCTGCAAAGACTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 466 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | ||||| || | ||| ||||| || || | ||||| || || Sbjct 467 CTTTTAACATTCTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 526 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || ||||| |||| Sbjct 527 AGTGTCTTCACGAATATAAGCAT 549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396245254160091