Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20spiralis_20[refseq_20GCF_5F000181795.1_202011-01-11] 6,863 sequences; 63,525,422 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 129 1e-24 seq3072 125 1e-23 seq5152 118 2e-21 seq3435 114 3e-20 seq4763 105 1e-17 seq3296 96.9 7e-15 seq4234 93.3 8e-14 seq5 93.3 8e-14 seq3791 91.5 3e-13 >seq1 Length=3447954 Score = 129 bits (142), Expect = 1e-24 Identities = 113/141 (80%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||||||||| || || |||||||||||||| || || || || Sbjct 816545 CCAGCAAAAATCAGACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTCCCT 816486 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || ||||||||||| |||||| ||||| |||||||| || ||||| ||||| || | Sbjct 816485 TTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAAGA 816426 Query 82791 GTCTTTACAAATATCTGCATT 82811 ||||| ||||| || |||||| Sbjct 816425 GTCTTAACAAAAATTTGCATT 816405 Score = 127 bits (140), Expect = 4e-24 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||||||||||| || || ||||| || ||||||||||| | Sbjct 839517 CCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCTTGAATCTTGCTT 839458 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||||||||||| ||||| || || ||||| | || ||||| || ||||||||| Sbjct 839457 TTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCAAC 839398 Query 82791 GTCTTTACAAATATCTGCAT 82810 || || |||||||||||||| Sbjct 839397 GTTTTCACAAATATCTGCAT 839378 Score = 125 bits (138), Expect = 1e-23 Identities = 114/144 (79%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||||||| || | | ||||||||| || || ||||| || ||||||||||| || Sbjct 787083 TTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTG 787024 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 |||| |||||||| || |||||| |||||||||||||| || ||||| ||||| || Sbjct 787023 CCTTTCACATTTTCTATGGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTG 786964 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 | ||||| ||||| || |||||| Sbjct 786963 AGGGTCTTAACAAAAATTTGCATT 786940 Score = 125 bits (138), Expect = 1e-23 Identities = 116/147 (79%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 82665 TGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATC 82724 || || |||||||| || | | ||||||||| || || ||||| || ||||||||||| Sbjct 850347 TGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATT 850288 Query 82725 TTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCT 82784 || |||| |||||||| || |||||| |||||||||||||||||||| || || || Sbjct 850287 TTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCCA 850228 Query 82785 GTCAACGTCTTTACAAATATCTGCATT 82811 || | ||||| ||||| || |||||| Sbjct 850227 GTAAGGGTCTTAACAAAAATTTGCATT 850201 Score = 123 bits (136), Expect = 5e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || | | |||||||||||| || |||||||||||||| || || || | Sbjct 786790 CCAGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCCTGTATTTTGCCC 786731 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||||| || || |||||| |||||||||||||| || ||||| ||||| || | Sbjct 786730 TTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTGAGA 786671 Query 82791 GTCTTTACAAATATCTGCATT 82811 ||||| ||||| || |||||| Sbjct 786670 GTCTTAACAAAAATTTGCATT 786650 Score = 122 bits (134), Expect = 2e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 82670 TCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGC 82729 |||||| || || | | ||||||||| || || |||||||| ||||||||||| || | Sbjct 798688 TCCAGCTAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCTTTATCTTGAATTTTGCC 798629 Query 82730 TTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAA 82789 ||| |||||||| || |||||| ||||| |||||||| || ||||| ||||| || | Sbjct 798628 TTTCACATTTTCTATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAAG 798569 Query 82790 CGTCTTTACAAATATCTGCATT 82811 ||||| ||||| || |||||| Sbjct 798568 AGTCTTAACAAAAATTTGCATT 798547 Score = 122 bits (134), Expect = 2e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||||||||||| || || ||||| || || |||||||| | Sbjct 814571 CCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCTTGCTT 814512 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||||||||||| ||||| || || ||||| | || ||||| || ||||||||| Sbjct 814511 TTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCAAC 814452 Query 82791 GTCTTTACAAATATCTGCAT 82810 || || |||||||||||||| Sbjct 814451 GTTTTCACAAATATCTGCAT 814432 Score = 122 bits (134), Expect = 2e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||||||||||| || || ||||| || || |||||||| | Sbjct 849708 CCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCTTGCTT 849649 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||||||||||| ||||| || || ||||| | || ||||| || ||||||||| Sbjct 849648 TTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCAAC 849589 Query 82791 GTCTTTACAAATATCTGCAT 82810 || || |||||||||||||| Sbjct 849588 GTTTTCACAAATATCTGCAT 849569 Score = 122 bits (134), Expect = 2e-22 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 82665 TGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATC 82724 || || |||||||| || | | |||||||| || || ||||| || ||||||||||| Sbjct 889582 TGCTTACCAGCAAAAATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATT 889523 Query 82725 TTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCT 82784 || |||| |||||||| || |||||| |||||||||||||||||||| || || || Sbjct 889522 TTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCCA 889463 Query 82785 GTCAACGTCTTTACAAATATCTGCATT 82811 || | ||||| ||||| || |||||| Sbjct 889462 GTAAGGGTCTTAACAAAAATTTGCATT 889436 Score = 120 bits (132), Expect = 6e-22 Identities = 111/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || | | |||||||||||| || |||||||||||||| || || || | Sbjct 787358 CCAGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCCTGTATTTTGCCC 787299 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||||| || || |||||| ||||| |||||||| || ||||| ||||| || | Sbjct 787298 TTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAAGG 787239 Query 82791 GTCTTTACAAATATCTGCATT 82811 ||||| ||||| || |||||| Sbjct 787238 GTCTTAACAAAAATTTGCATT 787218 Score = 120 bits (132), Expect = 6e-22 Identities = 111/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||| ||||| ||||| ||||| || |||||||||||||| || Sbjct 793447 CCAGCAAAAATCAGACGTTGCTGATCGGGAGGAATTCCCTCTTTATCTTGAATCTTCCCT 793388 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||||| |||| |||||| ||||| |||||||| || || || || || || | Sbjct 793387 TTTACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTTTTCCCAGTTAGG 793328 Query 82791 GTCTTTACAAATATCTGCATT 82811 ||||| ||||| || |||||| Sbjct 793327 GTCTTAACAAAAATTTGCATT 793307 Score = 118 bits (130), Expect = 2e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||||||||||| || || ||||| || || |||||||| | Sbjct 888943 CCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCTTGCTT 888884 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||||||||||| ||||| || || ||||| | || ||||| || ||||||||| Sbjct 888883 TTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCAAC 888824 Query 82791 GTCTTTACAAATATCTGCAT 82810 || || |||||||| ||||| Sbjct 888823 GTTTTCACAAATATTTGCAT 888804 Score = 116 bits (128), Expect = 7e-21 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||||||| || | | ||||||||| || || |||||||||||||| || || || Sbjct 793162 TTACCAGCAAATATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTG 793103 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | |||||||| || || |||||| ||||| |||||||| || ||||| ||||| || Sbjct 793102 CCCTTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTA 793043 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 | ||||| ||||| || |||||| Sbjct 793042 AGAGTCTTAACAAAAATTTGCATT 793019 Score = 114 bits (126), Expect = 3e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||| ||||| ||||| ||||| || |||||||||||||| || Sbjct 758696 CCAGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCCTCTTTATCTTGAATCTTCCCT 758637 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || ||||| |||| |||||| ||||| |||||||| || || || || || || | Sbjct 758636 TTCACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTTTTCCCAGTTAGG 758577 Query 82791 GTCTTTACAAATATCTGCATT 82811 ||||| ||||| || |||||| Sbjct 758576 GTCTTAACAAAAATTTGCATT 758556 Score = 113 bits (124), Expect = 9e-20 Identities = 113/144 (78%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||||||| || | || ||| ||||| || || || ||||| || |||||||| ||| Sbjct 864131 TTACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGAAT-TTT 864073 Query 82728 GCTTTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 ||||| || ||||||||||||||| || ||||||||||| || || || || || || Sbjct 864072 ACTTTTCACGTTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGT 864013 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 || || || ||||| |||||||| Sbjct 864012 TAATGTTTTCACAAAAATCTGCAT 863989 Score = 111 bits (122), Expect = 3e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || || | ||| ||||| || || ||||| || ||||| || || || || Sbjct 840150 CCAGCAAAAATCAGACGTTGCTGATCCGGTGGAATTCCCTCTTTATCCTGTATTTTGCCT 840091 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || |||||||| || |||||| |||||||||||||| || || || ||||| || | Sbjct 840090 TTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATGGTTTTGCCGGTGAGG 840031 Query 82791 GTCTTTACAAATATCTGCATT 82811 ||||| ||||| || |||||| Sbjct 840030 GTCTTAACAAAAATTTGCATT 840010 Score = 111 bits (122), Expect = 3e-19 Identities = 115/148 (78%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||||| |||||| ||||| ||||| || ||||||||||| ||||| ||| Sbjct 863448 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAAT-TTT 863390 Query 82728 GCTTTTA-CATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 |||||| |||| || || || || ||||| ||||| | ||||| || || || || Sbjct 863389 ACTTTTAACATTCTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGT 863330 Query 82787 CAACGTCTTTACAAATATCTGCATTATT 82814 | ||||| || ||||||||||| ||| Sbjct 863329 AAGTGTCTTCACGAATATCTGCATAATT 863302 Score = 107 bits (118), Expect = 4e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||||||| || || | |||||||| || || ||||| || ||||| ||||| || Sbjct 839188 TTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 839129 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 |||| ||||||||||| | || ||||| ||||||| ||| || || || || ||| Sbjct 839128 CCTTTCACATTTTCAATTGAGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCCAGTC 839069 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 | || || ||||||||||||||| Sbjct 839068 AGAGTTTTGACAAATATCTGCATT 839045 Score = 102 bits (112), Expect = 2e-16 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 82665 TGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATC 82724 || || |||||||| || | | ||||||||| || || ||||| || ||||||||||| Sbjct 792882 TGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATT 792823 Query 82725 TTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTT 82780 || |||| |||||||| || |||||| |||||||||||||| || ||||| || Sbjct 792822 TTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTT 792767 Score = 102 bits (112), Expect = 2e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||||||| || || | ||||||||| || || ||||| || ||||| ||||| || Sbjct 849379 TTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 849320 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | || ||||||||||| || || || || ||||||| || || || || || ||| Sbjct 849319 CCCTTCACATTTTCAATTGTGTCTGAGGGCTCCACTTCCAGTGTAATGGTTTTCCCAGTC 849260 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 | || || ||||||||||||||| Sbjct 849259 AGAGTTTTGACAAATATCTGCATT 849236 Score = 102 bits (112), Expect = 2e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||||||| || || | ||||||||| || || ||||| || ||||| ||||| || Sbjct 888614 TTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 888555 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | || ||||||||||| || || || || ||||||| || || || || || ||| Sbjct 888554 CCCTTCACATTTTCAATTGTGTCTGAGGGCTCCACTTCCAGTGTAATGGTTTTCCCAGTC 888495 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 | || || ||||||||||||||| Sbjct 888494 AGAGTTTTGACAAATATCTGCATT 888471 Score = 98.7 bits (108), Expect = 2e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || ||||| || || | || ||||| || || ||||| || ||||| ||||| || Sbjct 814242 TTACCGGCAAAAATCAGACGCTGCTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 814183 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 |||| ||||||||||| | || ||||| ||||||| ||| || || || || ||| Sbjct 814182 CCTTTCACATTTTCAATTGAGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCCAGTC 814123 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 | || || ||||||||||||||| Sbjct 814122 AGAGTTTTGACAAATATCTGCATT 814099 Score = 87.8 bits (96), Expect = 4e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || | | ||||||||| || || ||||| || ||||||||||| || || Sbjct 816261 CCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTGCCT 816202 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || ||||||| || | |||| || | ||||| |||||| || | || | || | Sbjct 816201 TTCTCATTTTCTATTGAATCAGATGGGTGTACTTACAAAGTGATTGATCTGTCAGTAAGA 816142 Query 82791 GTCTTTACAAATATCTGCATT 82811 ||||| ||||| || |||||| Sbjct 816141 GTCTTAACAAAAATTTGCATT 816121 >seq3072 Length=446 Score = 125 bits (138), Expect = 1e-23 Identities = 114/141 (81%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || | || ||| ||||| || || || ||||||||||||||||| ||| || Sbjct 235 CCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAAT-TTTACT 177 Query 82731 TTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAA 82789 ||| |||||||||||||||||| || ||||||||||| || || || || || || || Sbjct 176 TTTCACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTAA 117 Query 82790 CGTCTTTACAAATATCTGCAT 82810 || || ||||| |||||||| Sbjct 116 TGTTTTCACAAAAATCTGCAT 96 >seq5152 Length=332 Score = 118 bits (130), Expect = 2e-21 Identities = 114/144 (79%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||||||| || | | ||||||||| || || ||||| || ||||||||||| || Sbjct 187 TTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTG 246 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 |||| |||||||| || |||||| |||||||||||||| || ||| | ||||| || Sbjct 247 CCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATC-TTTTGCC-GTG 304 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 || ||||| ||||| || |||||| Sbjct 305 AAGGTCTTAACAAAAATTTGCATT 328 >seq3435 Length=827 Score = 114 bits (126), Expect = 3e-20 Identities = 112/142 (79%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || | || ||| ||||| || || || ||||||||||||||||| ||| || Sbjct 446 CCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAAT-TTTACT 504 Query 82731 TTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAA 82789 ||| |||||||||||||| || ||| ||||| ||||| || || || || || || || Sbjct 505 TTTCACATTTTCAATCGTGTCTGAAGGCTCTACCTCCAATGTGATTGTTTTTCCAGTTAA 564 Query 82790 CGTCTTTACAAATATCTGCATT 82811 || || || || ||||||||| Sbjct 565 TGTTTTCACGAAAATCTGCATT 586 >seq4763 Length=1852 Score = 105 bits (116), Expect = 1e-17 Identities = 112/145 (77%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||||||| || | || ||| ||||| || || || ||||| || |||||||| ||| Sbjct 1619 TTACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGAAT-TTT 1677 Query 82728 GCTTTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 ||||| || ||||||||||| || ||| ||||| ||||| || || || || || || Sbjct 1678 ACTTTTCACGTTTTCAATCGTGTCCGAAGGCTCTACCTCCAATGTGATTGTTTTTCCAGT 1737 Query 82787 CAACGTCTTTACAAATATCTGCATT 82811 || || || ||||| ||||||||| Sbjct 1738 TAATGTTTTCACAAAAATCTGCATT 1762 >seq3296 Length=842 Score = 96.9 bits (106), Expect = 7e-15 Identities = 111/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || ||||||| || |||||| ||||| ||||| || ||||||||||| ||||| ||| Sbjct 407 TTACCTGCAAAGACTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAAT-TTT 465 Query 82728 GCTTTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 ||||| ||||| || || || || ||||| ||||| | ||||| || || || || Sbjct 466 ACTTTTAACATTCTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGT 525 Query 82787 CAACGTCTTTACAAATATCTGCATTAT 82813 | ||||| || ||||| |||| || Sbjct 526 AAGTGTCTTCACGAATATAAGCATAAT 552 >seq4234 Length=1659 Score = 93.3 bits (102), Expect = 8e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 |||||||| || ||||| || || || ||||| | ||| |||||| ||| ||||||||| Sbjct 1039 CCTTCCTTGTCCTGAATTTTAGCCTTCACATTCTGAATTGTATCAGAAGGCTCTACTTCC 1098 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || ||||| ||||| | || || |||||||| ||||| Sbjct 1099 AAAGTGATGGTCTTTCCTGTTAGAGTTTTCACAAATATTTGCAT 1142 >seq5 Length=5663831 Score = 93.3 bits (102), Expect = 8e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 |||||||| || ||||| || || || ||||| | ||| |||||| ||| ||||||||| Sbjct 476899 CCTTCCTTGTCCTGAATTTTAGCCTTCACATTCTGAATTGTATCAGAAGGCTCTACTTCC 476958 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || ||||| ||||| | || || |||||||| ||||| Sbjct 476959 AAAGTGATGGTCTTTCCTGTTAGAGTTTTCACAAATATTTGCAT 477002 >seq3791 Length=500 Score = 91.5 bits (100), Expect = 3e-13 Identities = 106/142 (75%), Gaps = 1/142 (1%) Strand=Plus/Plus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || | | ||| |||||||| || |||||||||||||| || || || || Sbjct 293 CCAGCAAAAATCACACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTCCCT 352 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || ||||| || || |||||| || |||||||| || ||||| ||||| || | Sbjct 353 TTCACATTCTCTATTGTATCAGATGGCTCTACTTCTTGTGTGATCGTTTTGCCGGTAAGA 412 Query 82791 GTCTTTACA-AATATCTGCATT 82811 ||||| ||| || | |||||| Sbjct 413 GTCTTAACACAAATTTTGCATT 434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981740865786557