Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20spiralis_20[refseq_20GCF_5F000181795.1_202011-01-11]
6,863 sequences; 63,525,422 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 1e-20
seq4763 96.9 4e-15
seq3435 96.9 4e-15
seq5 96.9 4e-15
seq3072 86.0 6e-12
seq5152 82.4 8e-11
>seq1
Length=3447954
Score = 114 bits (126), Expect = 1e-20
Identities = 113/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || |||||||||| ||||||||||||||| || || || ||||| || ||||||||
Sbjct 814242 TTACCGGCAAAAATCAGACGCTGCTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 814183
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
||| || || | || ||| || | |||||| || |||||||||||||| || ||
Sbjct 814182 CCTTTCACATTTTCAATTGAGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCCAGTC 814123
Query 134691 AAAGTTTTAACGAAAATTTGCATTTT 134716
| |||||| || || || ||||||||
Sbjct 814122 AGAGTTTTGACAAATATCTGCATTTT 814097
Score = 111 bits (122), Expect = 2e-19
Identities = 112/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || |||||||||| |||||| |||||||| || || || ||||| || ||||||||
Sbjct 839188 TTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 839129
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
||| || || | || ||| || | |||||| || |||||||||||||| || ||
Sbjct 839128 CCTTTCACATTTTCAATTGAGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCCAGTC 839069
Query 134691 AAAGTTTTAACGAAAATTTGCATTTT 134716
| |||||| || || || ||||||||
Sbjct 839068 AGAGTTTTGACAAATATCTGCATTTT 839043
Score = 102 bits (112), Expect = 8e-17
Identities = 107/141 (76%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| || ||||||||||| || ||||| || || || |||||||| ||||||||||| |
Sbjct 798687 CCAGCTAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCTTTATCTTGAATTTTGCCT 798628
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | ||| || || | |||||| || | || || ||||| ||||| | |
Sbjct 798627 TTCACATTTTCTATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAAGA 798568
Query 134694 GTTTTAACGAAAATTTGCATT 134714
|| ||||| ||||||||||||
Sbjct 798567 GTCTTAACAAAAATTTGCATT 798547
Score = 100 bits (110), Expect = 3e-16
Identities = 111/148 (75%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 134567 CTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAAT 134626
||| || || ||||||||||||||||| ||||| || || || || ||||| ||||||||
Sbjct 889583 CTGCTTACCAGCAAAAATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAAT 889524
Query 134627 TTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACC 134686
||| ||| || || | ||| || || | ||| || || | ||| || ||||| ||
Sbjct 889523 TTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCC 889464
Query 134687 GGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| | || ||||| ||||||||||||
Sbjct 889463 AGTAAGGGTCTTAACAAAAATTTGCATT 889436
Score = 98.7 bits (108), Expect = 1e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || |||||||||| ||| || |||||||| || || || ||||| || ||||||||
Sbjct 849379 TTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 849320
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|| || || | |||||| || | ||||| || || ||||||||||| || ||
Sbjct 849319 CCCTTCACATTTTCAATTGTGTCTGAGGGCTCCACTTCCAGTGTAATGGTTTTCCCAGTC 849260
Query 134691 AAAGTTTTAACGAAAATTTGCATTTTG 134717
| |||||| || || || |||||||||
Sbjct 849259 AGAGTTTTGACAAATATCTGCATTTTG 849233
Score = 98.7 bits (108), Expect = 1e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || |||||||||| ||| || |||||||| || || || ||||| || ||||||||
Sbjct 888614 TTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 888555
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|| || || | |||||| || | ||||| || || ||||||||||| || ||
Sbjct 888554 CCCTTCACATTTTCAATTGTGTCTGAGGGCTCCACTTCCAGTGTAATGGTTTTCCCAGTC 888495
Query 134691 AAAGTTTTAACGAAAATTTGCATTTTG 134717
| |||||| || || || |||||||||
Sbjct 888494 AGAGTTTTGACAAATATCTGCATTTTG 888468
Score = 96.9 bits (106), Expect = 4e-15
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| |||||||||| ||| ||||||||||| || || || ||||| |||||||| || |
Sbjct 793447 CCAGCAAAAATCAGACGTTGCTGATCGGGAGGAATTCCCTCTTTATCTTGAATCTTCCCT 793388
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | || || || | |||||| || | || |||||||| || ||||
Sbjct 793387 TTTACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTTTTCCCAGTTAGG 793328
Query 134694 GTTTTAACGAAAATTTGCATT 134714
|| ||||| ||||||||||||
Sbjct 793327 GTCTTAACAAAAATTTGCATT 793307
Score = 96.9 bits (106), Expect = 4e-15
Identities = 110/148 (74%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 134567 CTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAAT 134626
||| || || |||||||||||||| || ||||| || || || || ||||| ||||||||
Sbjct 850348 CTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAAT 850289
Query 134627 TTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACC 134686
||| ||| || || | ||| || || | ||| || || | ||| || ||||| ||
Sbjct 850288 TTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCC 850229
Query 134687 GGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| | || ||||| ||||||||||||
Sbjct 850228 AGTAAGGGTCTTAACAAAAATTTGCATT 850201
Score = 93.3 bits (102), Expect = 4e-14
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| |||||||||| ||| |||||||| || || || || ||||| |||||||| || |
Sbjct 758696 CCAGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCCTCTTTATCTTGAATCTTCCCT 758637
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | || || || | |||||| || | || |||||||| || ||||
Sbjct 758636 TTCACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTTTTCCCAGTTAGG 758577
Query 134694 GTTTTAACGAAAATTTGCATT 134714
|| ||||| ||||||||||||
Sbjct 758576 GTCTTAACAAAAATTTGCATT 758556
Score = 91.5 bits (100), Expect = 1e-13
Identities = 108/144 (75%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || ||||| ||||| || |||||||| || || ||||||||||| |||||||||||
Sbjct 864131 TTACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGAATTTTA 864072
Query 134631 TGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
||| | || | |||| || || || | || || || | || || ||||| || ||
Sbjct 864071 CTTTTCA-CGTTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGT 864013
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
||| ||||| || ||||| |||||
Sbjct 864012 TAATGTTTTCACAAAAATCTGCAT 863989
Score = 89.7 bits (98), Expect = 5e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || |||||||||||||| || ||||| || || || || ||||| |||||||||||
Sbjct 787083 TTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTG 787024
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
||| || || | || || || | ||| || || | || || ||||| |||||
Sbjct 787023 CCTTTCACATTTTCTATGGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTG 786964
Query 134691 AAAGTTTTAACGAAAATTTGCATT 134714
| || ||||| ||||||||||||
Sbjct 786963 AGGGTCTTAACAAAAATTTGCATT 786940
Score = 87.8 bits (96), Expect = 2e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| |||||||||||||| || ||||| ||||| || ||||| || || || |||||
Sbjct 786790 CCAGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCCTGTATTTTGCCC 786731
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | ||| || || | ||| || || | || || ||||| ||||| | |
Sbjct 786730 TTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTGAGA 786671
Query 134694 GTTTTAACGAAAATTTGCATT 134714
|| ||||| ||||||||||||
Sbjct 786670 GTCTTAACAAAAATTTGCATT 786650
Score = 87.8 bits (96), Expect = 2e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| |||||||||||||| || ||||| ||||| || ||||| || || || |||||
Sbjct 787358 CCAGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCCTGTATTTTGCCC 787299
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | ||| || || | |||||| || | || || ||||| ||||| |
Sbjct 787298 TTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAAGG 787239
Query 134694 GTTTTAACGAAAATTTGCATT 134714
|| ||||| ||||||||||||
Sbjct 787238 GTCTTAACAAAAATTTGCATT 787218
Score = 87.8 bits (96), Expect = 2e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| |||||||||| ||| || ||||| || || || ||||| || || || ||||| |
Sbjct 816545 CCAGCAAAAATCAGACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTCCCT 816486
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | ||| || || | |||||| || | || || ||||| ||||| | |
Sbjct 816485 TTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTAAGA 816426
Query 134694 GTTTTAACGAAAATTTGCATT 134714
|| ||||| ||||||||||||
Sbjct 816425 GTCTTAACAAAAATTTGCATT 816405
Score = 87.8 bits (96), Expect = 2e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| |||||||||| ||| |||||||| || || || || ||||| || || ||||| |
Sbjct 840150 CCAGCAAAAATCAGACGTTGCTGATCCGGTGGAATTCCCTCTTTATCCTGTATTTTGCCT 840091
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | ||| || || | ||| || || | || |||||||| ||||| |
Sbjct 840090 TTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATGGTTTTGCCGGTGAGG 840031
Query 134694 GTTTTAACGAAAATTTGCATT 134714
|| ||||| ||||||||||||
Sbjct 840030 GTCTTAACAAAAATTTGCATT 840010
Score = 86.0 bits (94), Expect = 6e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| |||||||| | ||||| ||||| || || ||||||||||| |||||||| || |
Sbjct 839517 CCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCTTGAATCTTGCTT 839458
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | ||| || |||| || || || || ||||| ||||| || || ||
Sbjct 839457 TTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCAAC 839398
Query 134694 GTTTTAACGAAAATTTGCAT 134713
||||| || || || |||||
Sbjct 839397 GTTTTCACAAATATCTGCAT 839378
Score = 86.0 bits (94), Expect = 6e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| |||||||| | ||||| ||||| || || ||||||||||| || ||||| || |
Sbjct 888943 CCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCTTGCTT 888884
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | ||| || |||| || || || || ||||| ||||| || || ||
Sbjct 888883 TTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCAAC 888824
Query 134694 GTTTTAACGAAAATTTGCAT 134713
||||| || || ||||||||
Sbjct 888823 GTTTTCACAAATATTTGCAT 888804
Score = 84.2 bits (92), Expect = 2e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || ||||| |||||||| || ||||| || || || ||||| || || || |||||
Sbjct 793162 TTACCAGCAAATATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTG 793103
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|| || || | ||| || || | |||||| || | || || ||||| |||||
Sbjct 793102 CCCTTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAGGTGATCGTTTTGCCGGTA 793043
Query 134691 AAAGTTTTAACGAAAATTTGCATT 134714
| ||| ||||| ||||||||||||
Sbjct 793042 AGAGTCTTAACAAAAATTTGCATT 793019
Score = 82.4 bits (90), Expect = 8e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| |||||||| | ||||| ||||| || || ||||||||||| || ||||| || |
Sbjct 814571 CCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCTTGCTT 814512
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | ||| || |||| || || || || ||||| ||||| || || ||
Sbjct 814511 TTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCAAC 814452
Query 134694 GTTTTAACGAAAATTTGCAT 134713
||||| || || || |||||
Sbjct 814451 GTTTTCACAAATATCTGCAT 814432
Score = 82.4 bits (90), Expect = 8e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| |||||||| | ||||| ||||| || || ||||||||||| || ||||| || |
Sbjct 849708 CCAGCAAAAATAAGCCGCTGTTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCTTGCTT 849649
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | ||| || |||| || || || || ||||| ||||| || || ||
Sbjct 849648 TTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCAAC 849589
Query 134694 GTTTTAACGAAAATTTGCAT 134713
||||| || || || |||||
Sbjct 849588 GTTTTCACAAATATCTGCAT 849569
>seq4763
Length=1852
Score = 96.9 bits (106), Expect = 4e-15
Identities = 110/145 (76%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || ||||| ||||| || |||||||| || || ||||||||||| |||||||||||
Sbjct 1619 TTACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGAATTTTA 1678
Query 134631 TGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
||| | || | |||| ||||| || | || || || | || || ||||| || ||
Sbjct 1679 CTTTTCA-CGTTTTCAATCGTGTCCGAAGGCTCTACCTCCAATGTGATTGTTTTTCCAGT 1737
Query 134690 TAAAGTTTTAACGAAAATTTGCATT 134714
||| ||||| || ||||| ||||||
Sbjct 1738 TAATGTTTTCACAAAAATCTGCATT 1762
>seq3435
Length=827
Score = 96.9 bits (106), Expect = 4e-15
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| ||||| ||||| || |||||||| ||||| |||||||| || ||||||||||| |
Sbjct 446 CCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAATTTTACTT 505
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | ||||| || | || || || | || || ||||| || |||||
Sbjct 506 TTCACATTTTCAATCGTGTCTGAAGGCTCTACCTCCAATGTGATTGTTTTTCCAGTTAAT 565
Query 134694 GTTTTAACGAAAATTTGCATT 134714
||||| |||||||| ||||||
Sbjct 566 GTTTTCACGAAAATCTGCATT 586
>seq5
Length=5663831
Score = 96.9 bits (106), Expect = 4e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 21743 CCTCGTCGCGCGAAATCAATTCGTTGCTGAACGTGAGACCGGGCATTAAACCTCGATTTT 21802
||||||| || || |||| |||||||||||||| | ||||||||| | || || ||||
Sbjct 1930276 CCTCGTCACGAGAGATCAGCTCGTTGCTGAACGTCAAACCGGGCATCAGGCCGCGCTTTT 1930217
Query 21803 TAATGTAAAAAATTGCCGCAAAGCTACCGGaaaaaaaCACGCCCTCCACAATGGCGAACG 21862
| | | ||||||| ||| ||||| |||||||| || | ||| || ||| |||||||
Sbjct 1930216 TCAACCAGAAAATTGACGCGAAGCTGCCGGAAAAGAAAATGCCTTCAACAGCTGCGAACG 1930157
Query 21863 CCACCA 21868
| ||||
Sbjct 1930156 CGACCA 1930151
>seq3072
Length=446
Score = 86.0 bits (94), Expect = 6e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| ||||| ||||| || |||||||| ||||| |||||||| || ||||||||||| |
Sbjct 235 CCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAATTTTACTT 176
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | || || || | || || || | || || ||||| || |||||
Sbjct 175 TTCACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTAAT 116
Query 134694 GTTTTAACGAAAATTTGCAT 134713
||||| || ||||| |||||
Sbjct 115 GTTTTCACAAAAATCTGCAT 96
>seq5152
Length=332
Score = 82.4 bits (90), Expect = 8e-11
Identities = 106/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || |||||||||||||| || ||||| || || || || ||||| |||||||||||
Sbjct 187 TTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTG 246
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
||| || || | ||| || || | ||| || || | || || |||| || ||
Sbjct 247 CCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAGGTGAT-CTTTTGCC-GTG 304
Query 134691 AAAGTTTTAACGAAAATTTGCATT 134714
|| || ||||| ||||||||||||
Sbjct 305 AAGGTCTTAACAAAAATTTGCATT 328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505355043134760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |