Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20spiralis_20[refseq_20GCF_5F000181795.1_202011-01-11] 6,863 sequences; 63,525,422 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq3791 107 2e-18 seq5 104 3e-17 seq5152 91.5 2e-13 seq4234 82.4 9e-11 seq3296 82.4 9e-11 >seq1 Length=3447954 Score = 118 bits (130), Expect = 1e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| ||||||||||| || || || | || || || || Sbjct 816405 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTGGAACCATC 816464 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| |||| |||| | ||||| ||||| ||||| |||||||| || || || Sbjct 816465 TGATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCA 816524 Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547 || ||||| ||||||||||||| Sbjct 816525 ACAACGTCTGATTTTTGCTGGTA 816547 Score = 118 bits (130), Expect = 1e-21 Identities = 115/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || |||||||| || || || || || || ||||| || || || ||| | Sbjct 849236 AATGCAGATATTTGTCAAAACTCTGACTGGGAAAACCATTACACTGGAAGTGGAGCCCTC 849295 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| |||| |||||| |||||||||||| || ||||||||||| || || || Sbjct 849296 AGACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCA 849355 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 || ||||| ||||||||||||||| || Sbjct 849356 ACAACGTCTGATTTTTGCTGGTAAGTAA 849383 Score = 118 bits (130), Expect = 1e-21 Identities = 115/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || |||||||| || || || || || || ||||| || || || ||| | Sbjct 888471 AATGCAGATATTTGTCAAAACTCTGACTGGGAAAACCATTACACTGGAAGTGGAGCCCTC 888530 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| |||| |||||| |||||||||||| || ||||||||||| || || || Sbjct 888531 AGACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCA 888590 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 || ||||| ||||||||||||||| || Sbjct 888591 ACAACGTCTGATTTTTGCTGGTAAGTAA 888618 Score = 116 bits (128), Expect = 4e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| ||||| || || || || ||| | || || || || Sbjct 889436 AATGCAAATTTTTGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATC 889495 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| || | |||| |||| | |||||||| || || ||||||||||| || || || Sbjct 889496 TGATACAATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCGGATCA 889555 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCA 27551 |||||| | ||||||||||||||||| Sbjct 889556 ACAGCGTTTGATTTTTGCTGGTAAGCA 889582 Score = 114 bits (126), Expect = 1e-20 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || |||||||| || || || || || || |||||||| || || || | Sbjct 814099 AATGCAGATATTTGTCAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCCTC 814158 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || |||| |||| |||| | |||||||||||| || ||||||||||| || || || Sbjct 814159 AGACTCAATTGAAAATGTGAAAGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCA 814218 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 ||||||||| |||||||| |||||| || Sbjct 814219 GCAGCGTCTGATTTTTGCCGGTAAGTAA 814246 Score = 114 bits (126), Expect = 1e-20 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || |||||||| || || || || || || |||||||| || || || | Sbjct 839045 AATGCAGATATTTGTCAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCCTC 839104 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || |||| |||| |||| | |||||||||||| || ||||||||||| || || || Sbjct 839105 AGACTCAATTGAAAATGTGAAAGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCA 839164 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 |||||||| ||||||||||||||| || Sbjct 839165 ACAGCGTCTGATTTTTGCTGGTAAGTAA 839192 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| || |||||||| || || || | || || || || Sbjct 840010 AATGCAAATTTTTGTTAAGACCCTCACCGGCAAAACCATCACCTTGGAAGTAGAACCATC 840069 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| || | |||| |||| | ||||| ||||| || ||||||||||| || || || Sbjct 840070 TGATACAATAGAAAATGTGAAAGGCAAAATACAGGATAAAGAGGGAATTCCACCGGATCA 840129 Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547 ||| ||||| ||||||||||||| Sbjct 840130 GCAACGTCTGATTTTTGCTGGTA 840152 Score = 113 bits (124), Expect = 5e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| ||||| || || || || ||| | || || || || Sbjct 850201 AATGCAAATTTTTGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATC 850260 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| || | |||| |||| | |||||||| || || ||||||||||| || || || Sbjct 850261 TGATACAATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCGGATCA 850320 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCA 27551 || ||| | ||||||||||||||||| Sbjct 850321 ACAACGTTTGATTTTTGCTGGTAAGCA 850347 Score = 111 bits (122), Expect = 2e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| || |||||||| || || || | || || || || Sbjct 786940 AATGCAAATTTTTGTTAAGACCCTCACCGGCAAAACGATCACCTTGGAAGTAGAACCATC 786999 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| ||| | |||| |||| | |||||||| || || ||||||||||| || || || Sbjct 787000 TGATACCATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCGGATCA 787059 Query 27525 GCAGCGTCTAATTTTTGCTGGTAA 27548 || ||| | |||||||||||||| Sbjct 787060 ACAACGTTTGATTTTTGCTGGTAA 787083 Score = 109 bits (120), Expect = 6e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| ||||||||||| || || || | || || || || Sbjct 787218 AATGCAAATTTTTGTTAAGACCCTTACCGGCAAAACGATCACCTTGGAAGTGGAACCATC 787277 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| || | ||| | |||| ||||| ||||| ||||| |||||||| ||||| || Sbjct 787278 TGATACAATAGAGAATGTAAAGGGCAAAATACAGGATAAGGAAGGAATTCCGCCAGATCA 787337 Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547 || ||| | ||||||||||||| Sbjct 787338 ACAACGTTTGATTTTTGCTGGTA 787360 Score = 105 bits (116), Expect = 8e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| || |||||||| || || || | || || || || Sbjct 786650 AATGCAAATTTTTGTTAAGACTCTCACCGGCAAAACGATCACCTTGGAAGTAGAACCATC 786709 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| || | ||| | |||| ||||| ||||| ||||| |||||||| ||||| || Sbjct 786710 TGATACAATAGAGAATGTAAAGGGCAAAATACAGGATAAGGAAGGAATTCCGCCAGATCA 786769 Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547 || ||| | ||||||||||||| Sbjct 786770 ACAACGTTTGATTTTTGCTGGTA 786792 Score = 105 bits (116), Expect = 8e-18 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| ||||||||||| || || || | || || || || Sbjct 793019 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTGGAACCATC 793078 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| || | ||| | |||| ||||| ||||| ||||| |||||||| || || || Sbjct 793079 TGATACAATAGAGAATGTAAAGGGCAAAATACAGGATAAGGAAGGAATTCCACCGGATCA 793138 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 || ||| | || |||||||||||| || Sbjct 793139 ACAACGTTTGATATTTGCTGGTAAGTAA 793166 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| || || || || || || || | || || || || Sbjct 758556 AATGCAAATTTTTGTTAAGACCCTAACTGGGAAAACCATCACGTTGGAAGTGGAACCATC 758615 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| ||| ||| |||| | || ||||| || || |||||||||||||| || || Sbjct 758616 TGATACTGTTGAGAATGTGAAAGGGAAGATTCAAGATAAAGAGGGAATTCCTCCTGATCA 758675 Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547 ||| ||||| ||||||||||||| Sbjct 758676 GCAACGTCTGATTTTTGCTGGTA 758698 Score = 100 bits (110), Expect = 3e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || ||| | || || || || ||||| ||||| |||||| | Sbjct 888804 ATGCAAATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTCA 888863 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| | || || ||||||||||| || || || || ||||| || Sbjct 888864 GATACAATTGAAAATGTAAAAAGCAAGATTCAGGACAAAGAAGGCATCCCACCAGATCAA 888923 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGC 27550 ||||| || ||||||||||||| || Sbjct 888924 CAGCGGCTTATTTTTGCTGGTATGC 888948 Score = 96.9 bits (106), Expect = 4e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| || || || || || || || | || || || || Sbjct 793307 AATGCAAATTTTTGTTAAGACCCTAACTGGGAAAACCATCACGTTGGAAGTGGAACCATC 793366 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| ||| ||| | || | || ||||| || || |||||||||||||| || || Sbjct 793367 TGATACTGTTGAGAATGTAAAAGGGAAGATTCAAGATAAAGAGGGAATTCCTCCCGATCA 793426 Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547 ||| ||||| ||||||||||||| Sbjct 793427 GCAACGTCTGATTTTTGCTGGTA 793449 Score = 96.9 bits (106), Expect = 4e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| ||||||||||| || || || | || || || || Sbjct 798547 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTGGAACCATC 798606 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| || | |||| |||| | |||||||| || || || |||||||| || || || Sbjct 798607 TGATACAATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCGGATCA 798666 Query 27525 GCAGCGTCTAATTTTTGCTGG 27545 || ||| | ||||| ||||| Sbjct 798667 ACAACGTTTGATTTTAGCTGG 798687 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || ||| | || || || || ||||| ||||| |||||| | Sbjct 814432 ATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTCA 814491 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| | || || ||||||||||| || || || || ||||| || Sbjct 814492 GATACAATTGAAAATGTAAAAAGCAAGATTCAGGACAAAGAAGGCATCCCACCAGATCAA 814551 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGC 27550 ||||| || ||||||||||||| || Sbjct 814552 CAGCGGCTTATTTTTGCTGGTATGC 814576 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || ||| | || || || || ||||| ||||| |||||| | Sbjct 849569 ATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTCA 849628 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| | || || ||||||||||| || || || || ||||| || Sbjct 849629 GATACAATTGAAAATGTAAAAAGCAAGATTCAGGACAAAGAAGGCATCCCACCAGATCAA 849688 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGC 27550 ||||| || ||||||||||||| || Sbjct 849689 CAGCGGCTTATTTTTGCTGGTATGC 849713 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || ||| | || || || || ||||| ||||| |||||| | Sbjct 839378 ATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTCA 839437 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| | || || ||||| ||||| || || || || ||||| || Sbjct 839438 GATACAATTGAAAATGTAAAAAGCAAGATTCAAGACAAAGAAGGCATCCCACCAGATCAA 839497 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGC 27550 ||||| || ||||||||||||| || Sbjct 839498 CAGCGGCTTATTTTTGCTGGTATGC 839522 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || || || ||||| ||||| || || ||||| || || || ||||| || Sbjct 863303 ATTATGCAGATATTCGTGAAGACACTTACTGGAAAAACTATAACACTAGAAGTTGAACCA 863362 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | ||| | ||| | || |||||||||||| ||||| || |||||||| || Sbjct 863363 TCAGACACCATCGAGAATGTTAAAAGTAAAATTCAGGATAAGGAAGGCATTCCTCCTGAT 863422 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAA 27548 ||||| | |||| ||||| ||||| Sbjct 863423 CAGCAAAGATTAATCTTTGCAGGTAA 863448 >seq3791 Length=500 Score = 107 bits (118), Expect = 2e-18 Identities = 111/144 (77%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 27405 AATGCAAATCTT-TGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAG 27463 |||||||| || ||| ||||| ||||||||||| || || || | || || ||| || Sbjct 434 AATGCAAAATTTGTGTTAAGACTCTTACCGGCAAAACGATCACACAAGAAGTAGAGCCAT 375 Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 ||||| || | ||| |||| | ||||| ||||| ||||| |||||||| ||||| | Sbjct 374 CTGATACAATAGAGAATGTGAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCAGATC 315 Query 27524 AGCAGCGTCTAATTTTTGCTGGTA 27547 |||| ||| | ||||||||||||| Sbjct 314 AGCAACGTGTGATTTTTGCTGGTA 291 >seq5 Length=5663831 Score = 104 bits (114), Expect = 3e-17 Identities = 157/223 (70%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 64627 CTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGG 64686 ||||||| || || ||||| | || || | ||||| || || ||||| | || Sbjct 1930054 CTGTTCAACGCGATCGAGACCATTCCGTGCGTGAAGAAAAAAGCAGACTGGGCTTTGCGC 1930113 Query 64687 TGGATGAAT---CGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAA 64743 ||||| | ||| |||| | ||| | | ||| | | || || || ||| ||| Sbjct 1930114 TGGATCGGTGACCGTCAGTCGCCATTTTGCGAACGTTTGGTCGCGTTCGCAGCTGTTGAA 1930173 Query 64744 GGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATG 64803 || ||||||||||| || ||| || ||||||||| | |||||||| ||||||||| Sbjct 1930174 GGCATTTTCTTTTCCGGCAGCTTCGCGTCAATTTTCTGGTTGAAAAAGCGCGGCCTGATG 1930233 Query 64804 CCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGG 64846 || ||| || |||| ||||||||||||||||| ||||||| Sbjct 1930234 CCCGGTTTGACGTTCAGCAACGAGCTGATCTCTCGTGACGAGG 1930276 Score = 82.4 bits (90), Expect = 9e-11 Identities = 89/117 (76%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 27394 AATATTACTATA-ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGA 27452 |||||| | || |||||||| ||||| || || || || || ||||| || ||| | || Sbjct 477015 AATATTTATTTAGATGCAAATATTTGTGAAAACTCTAACAGGAAAGACCATCACTTTGGA 476956 Query 27453 GGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || ||| | ||||| ||| ||| ||||||||||||||||||||||||| || Sbjct 476955 AGTAGAGCCTTCTGATACAATTCAGAATGTGAAGGCTAAAATTCAGGACAAGGAAGG 476899 >seq5152 Length=332 Score = 91.5 bits (100), Expect = 2e-13 Identities = 108/144 (75%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| ||| |||||| | || || | || || || || Sbjct 328 AATGCAAATTTTTGTTAAGAC-CTTCACGGCAAAAG-ATCACCTTGGAAGTAGAACCATC 271 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| || | |||| |||| | |||||||| || || ||||||||||| || || || Sbjct 270 TGATACAATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCGGATCA 211 Query 27525 GCAGCGTCTAATTTTTGCTGGTAA 27548 || ||| | |||||||||||||| Sbjct 210 ACAACGTTTGATTTTTGCTGGTAA 187 >seq4234 Length=1659 Score = 82.4 bits (90), Expect = 9e-11 Identities = 89/117 (76%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 27394 AATATTACTATA-ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGA 27452 |||||| | || |||||||| ||||| || || || || || ||||| || ||| | || Sbjct 1155 AATATTTATTTAGATGCAAATATTTGTGAAAACTCTAACAGGAAAGACCATCACTTTGGA 1096 Query 27453 GGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || ||| | ||||| ||| ||| ||||||||||||||||||||||||| || Sbjct 1095 AGTAGAGCCTTCTGATACAATTCAGAATGTGAAGGCTAAAATTCAGGACAAGGAAGG 1039 >seq3296 Length=842 Score = 82.4 bits (90), Expect = 9e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 27396 TATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGT 27455 |||| ||| |||| || || || ||||| ||||| || || ||||| || || || || Sbjct 559 TATTCATATTATGCTTATATTCGTGAAGACACTTACTGGAAAAACTATAACACTAGAAGT 500 Query 27456 TGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCC 27515 ||| || || | ||| | ||| | || |||||||||||| ||||| || ||||| Sbjct 499 TGAACCATCAGACACCATCGAGAATGTTAAAAGTAAAATTCAGGATAAGGAAGGCATTCC 440 Query 27516 TCCAGACCAGCAGCGTCTAATTTTTGCTGGTAA 27548 ||| || ||||| | || | ||||| ||||| Sbjct 439 TCCTGATCAGCAAAGATTAGTCTTTGCAGGTAA 407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570261474496560