Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20spiralis_20[refseq_20GCF_5F000181795.1_202011-01-11]
6,863 sequences; 63,525,422 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 1e-21
seq3791 107 2e-18
seq5 104 3e-17
seq5152 91.5 2e-13
seq4234 82.4 9e-11
seq3296 82.4 9e-11
>seq1
Length=3447954
Score = 118 bits (130), Expect = 1e-21
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| ||||| ||||||||||| || || || | || || || ||
Sbjct 816405 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTGGAACCATC 816464
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| |||| |||| |||| | ||||| ||||| ||||| |||||||| || || ||
Sbjct 816465 TGATACAATTGAAAATGTGAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCGGATCA 816524
Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547
|| ||||| |||||||||||||
Sbjct 816525 ACAACGTCTGATTTTTGCTGGTA 816547
Score = 118 bits (130), Expect = 1e-21
Identities = 115/148 (78%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || |||||||| || || || || || || ||||| || || || ||| |
Sbjct 849236 AATGCAGATATTTGTCAAAACTCTGACTGGGAAAACCATTACACTGGAAGTGGAGCCCTC 849295
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | |||| |||| |||||| |||||||||||| || ||||||||||| || || ||
Sbjct 849296 AGACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCA 849355
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAA 27552
|| ||||| ||||||||||||||| ||
Sbjct 849356 ACAACGTCTGATTTTTGCTGGTAAGTAA 849383
Score = 118 bits (130), Expect = 1e-21
Identities = 115/148 (78%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || |||||||| || || || || || || ||||| || || || ||| |
Sbjct 888471 AATGCAGATATTTGTCAAAACTCTGACTGGGAAAACCATTACACTGGAAGTGGAGCCCTC 888530
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | |||| |||| |||||| |||||||||||| || ||||||||||| || || ||
Sbjct 888531 AGACACAATTGAAAATGTGAAGGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCA 888590
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAA 27552
|| ||||| ||||||||||||||| ||
Sbjct 888591 ACAACGTCTGATTTTTGCTGGTAAGTAA 888618
Score = 116 bits (128), Expect = 4e-21
Identities = 114/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| ||||| ||||| || || || || ||| | || || || ||
Sbjct 889436 AATGCAAATTTTTGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATC 889495
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| || | |||| |||| | |||||||| || || ||||||||||| || || ||
Sbjct 889496 TGATACAATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCGGATCA 889555
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCA 27551
|||||| | |||||||||||||||||
Sbjct 889556 ACAGCGTTTGATTTTTGCTGGTAAGCA 889582
Score = 114 bits (126), Expect = 1e-20
Identities = 114/148 (77%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || |||||||| || || || || || || |||||||| || || || |
Sbjct 814099 AATGCAGATATTTGTCAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCCTC 814158
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| |||| |||| |||| | |||||||||||| || ||||||||||| || || ||
Sbjct 814159 AGACTCAATTGAAAATGTGAAAGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCA 814218
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAA 27552
||||||||| |||||||| |||||| ||
Sbjct 814219 GCAGCGTCTGATTTTTGCCGGTAAGTAA 814246
Score = 114 bits (126), Expect = 1e-20
Identities = 114/148 (77%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || |||||||| || || || || || || |||||||| || || || |
Sbjct 839045 AATGCAGATATTTGTCAAAACTCTGACTGGGAAAACCATTACTCTGGAAGTGGAACCCTC 839104
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| |||| |||| |||| | |||||||||||| || ||||||||||| || || ||
Sbjct 839105 AGACTCAATTGAAAATGTGAAAGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGATCA 839164
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAA 27552
|||||||| ||||||||||||||| ||
Sbjct 839165 ACAGCGTCTGATTTTTGCTGGTAAGTAA 839192
Score = 114 bits (126), Expect = 1e-20
Identities = 111/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| ||||| || |||||||| || || || | || || || ||
Sbjct 840010 AATGCAAATTTTTGTTAAGACCCTCACCGGCAAAACCATCACCTTGGAAGTAGAACCATC 840069
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| || | |||| |||| | ||||| ||||| || ||||||||||| || || ||
Sbjct 840070 TGATACAATAGAAAATGTGAAAGGCAAAATACAGGATAAAGAGGGAATTCCACCGGATCA 840129
Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547
||| ||||| |||||||||||||
Sbjct 840130 GCAACGTCTGATTTTTGCTGGTA 840152
Score = 113 bits (124), Expect = 5e-20
Identities = 113/147 (77%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| ||||| ||||| || || || || ||| | || || || ||
Sbjct 850201 AATGCAAATTTTTGTTAAGACCCTTACTGGAAAAACAATAACTTTGGAAGTAGAACCATC 850260
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| || | |||| |||| | |||||||| || || ||||||||||| || || ||
Sbjct 850261 TGATACAATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCGGATCA 850320
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCA 27551
|| ||| | |||||||||||||||||
Sbjct 850321 ACAACGTTTGATTTTTGCTGGTAAGCA 850347
Score = 111 bits (122), Expect = 2e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| ||||| || |||||||| || || || | || || || ||
Sbjct 786940 AATGCAAATTTTTGTTAAGACCCTCACCGGCAAAACGATCACCTTGGAAGTAGAACCATC 786999
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| ||| | |||| |||| | |||||||| || || ||||||||||| || || ||
Sbjct 787000 TGATACCATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCGGATCA 787059
Query 27525 GCAGCGTCTAATTTTTGCTGGTAA 27548
|| ||| | ||||||||||||||
Sbjct 787060 ACAACGTTTGATTTTTGCTGGTAA 787083
Score = 109 bits (120), Expect = 6e-19
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| ||||| ||||||||||| || || || | || || || ||
Sbjct 787218 AATGCAAATTTTTGTTAAGACCCTTACCGGCAAAACGATCACCTTGGAAGTGGAACCATC 787277
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| || | ||| | |||| ||||| ||||| ||||| |||||||| ||||| ||
Sbjct 787278 TGATACAATAGAGAATGTAAAGGGCAAAATACAGGATAAGGAAGGAATTCCGCCAGATCA 787337
Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547
|| ||| | |||||||||||||
Sbjct 787338 ACAACGTTTGATTTTTGCTGGTA 787360
Score = 105 bits (116), Expect = 8e-18
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| ||||| || |||||||| || || || | || || || ||
Sbjct 786650 AATGCAAATTTTTGTTAAGACTCTCACCGGCAAAACGATCACCTTGGAAGTAGAACCATC 786709
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| || | ||| | |||| ||||| ||||| ||||| |||||||| ||||| ||
Sbjct 786710 TGATACAATAGAGAATGTAAAGGGCAAAATACAGGATAAGGAAGGAATTCCGCCAGATCA 786769
Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547
|| ||| | |||||||||||||
Sbjct 786770 ACAACGTTTGATTTTTGCTGGTA 786792
Score = 105 bits (116), Expect = 8e-18
Identities = 112/148 (76%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| ||||| ||||||||||| || || || | || || || ||
Sbjct 793019 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTGGAACCATC 793078
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| || | ||| | |||| ||||| ||||| ||||| |||||||| || || ||
Sbjct 793079 TGATACAATAGAGAATGTAAAGGGCAAAATACAGGATAAGGAAGGAATTCCACCGGATCA 793138
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAA 27552
|| ||| | || |||||||||||| ||
Sbjct 793139 ACAACGTTTGATATTTGCTGGTAAGTAA 793166
Score = 100 bits (110), Expect = 3e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| ||||| || || || || || || || | || || || ||
Sbjct 758556 AATGCAAATTTTTGTTAAGACCCTAACTGGGAAAACCATCACGTTGGAAGTGGAACCATC 758615
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| ||| ||| |||| | || ||||| || || |||||||||||||| || ||
Sbjct 758616 TGATACTGTTGAGAATGTGAAAGGGAAGATTCAAGATAAAGAGGGAATTCCTCCTGATCA 758675
Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547
||| ||||| |||||||||||||
Sbjct 758676 GCAACGTCTGATTTTTGCTGGTA 758698
Score = 100 bits (110), Expect = 3e-16
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || ||| | || || || || ||||| ||||| |||||| |
Sbjct 888804 ATGCAAATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTCA 888863
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| |||| | || || ||||||||||| || || || || ||||| ||
Sbjct 888864 GATACAATTGAAAATGTAAAAAGCAAGATTCAGGACAAAGAAGGCATCCCACCAGATCAA 888923
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGC 27550
||||| || ||||||||||||| ||
Sbjct 888924 CAGCGGCTTATTTTTGCTGGTATGC 888948
Score = 96.9 bits (106), Expect = 4e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| ||||| || || || || || || || | || || || ||
Sbjct 793307 AATGCAAATTTTTGTTAAGACCCTAACTGGGAAAACCATCACGTTGGAAGTGGAACCATC 793366
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| ||| ||| | || | || ||||| || || |||||||||||||| || ||
Sbjct 793367 TGATACTGTTGAGAATGTAAAAGGGAAGATTCAAGATAAAGAGGGAATTCCTCCCGATCA 793426
Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547
||| ||||| |||||||||||||
Sbjct 793427 GCAACGTCTGATTTTTGCTGGTA 793449
Score = 96.9 bits (106), Expect = 4e-15
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| ||||| ||||||||||| || || || | || || || ||
Sbjct 798547 AATGCAAATTTTTGTTAAGACTCTTACCGGCAAAACGATCACCTTGGAAGTGGAACCATC 798606
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| || | |||| |||| | |||||||| || || || |||||||| || || ||
Sbjct 798607 TGATACAATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCGGATCA 798666
Query 27525 GCAGCGTCTAATTTTTGCTGG 27545
|| ||| | ||||| |||||
Sbjct 798667 ACAACGTTTGATTTTAGCTGG 798687
Score = 95.1 bits (104), Expect = 1e-14
Identities = 108/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || ||| | || || || || ||||| ||||| |||||| |
Sbjct 814432 ATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTCA 814491
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| |||| | || || ||||||||||| || || || || ||||| ||
Sbjct 814492 GATACAATTGAAAATGTAAAAAGCAAGATTCAGGACAAAGAAGGCATCCCACCAGATCAA 814551
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGC 27550
||||| || ||||||||||||| ||
Sbjct 814552 CAGCGGCTTATTTTTGCTGGTATGC 814576
Score = 95.1 bits (104), Expect = 1e-14
Identities = 108/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || ||| | || || || || ||||| ||||| |||||| |
Sbjct 849569 ATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTCA 849628
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| |||| | || || ||||||||||| || || || || ||||| ||
Sbjct 849629 GATACAATTGAAAATGTAAAAAGCAAGATTCAGGACAAAGAAGGCATCCCACCAGATCAA 849688
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGC 27550
||||| || ||||||||||||| ||
Sbjct 849689 CAGCGGCTTATTTTTGCTGGTATGC 849713
Score = 91.5 bits (100), Expect = 2e-13
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || ||| | || || || || ||||| ||||| |||||| |
Sbjct 839378 ATGCAGATATTTGTGAAAACGTTGACAGGAAAAACGATTACACTTGAAGTTGAGCCGTCA 839437
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| |||| | || || ||||| ||||| || || || || ||||| ||
Sbjct 839438 GATACAATTGAAAATGTAAAAAGCAAGATTCAAGACAAAGAAGGCATCCCACCAGATCAA 839497
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGC 27550
||||| || ||||||||||||| ||
Sbjct 839498 CAGCGGCTTATTTTTGCTGGTATGC 839522
Score = 87.8 bits (96), Expect = 2e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| || || || ||||| ||||| || || ||||| || || || ||||| ||
Sbjct 863303 ATTATGCAGATATTCGTGAAGACACTTACTGGAAAAACTATAACACTAGAAGTTGAACCA 863362
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | ||| | ||| | || |||||||||||| ||||| || |||||||| ||
Sbjct 863363 TCAGACACCATCGAGAATGTTAAAAGTAAAATTCAGGATAAGGAAGGCATTCCTCCTGAT 863422
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAA 27548
||||| | |||| ||||| |||||
Sbjct 863423 CAGCAAAGATTAATCTTTGCAGGTAA 863448
>seq3791
Length=500
Score = 107 bits (118), Expect = 2e-18
Identities = 111/144 (77%), Gaps = 1/144 (1%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTT-TGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAG 27463
|||||||| || ||| ||||| ||||||||||| || || || | || || ||| ||
Sbjct 434 AATGCAAAATTTGTGTTAAGACTCTTACCGGCAAAACGATCACACAAGAAGTAGAGCCAT 375
Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
||||| || | ||| |||| | ||||| ||||| ||||| |||||||| ||||| |
Sbjct 374 CTGATACAATAGAGAATGTGAAAGGGAAAATACAGGATAAGGAAGGAATTCCACCAGATC 315
Query 27524 AGCAGCGTCTAATTTTTGCTGGTA 27547
|||| ||| | |||||||||||||
Sbjct 314 AGCAACGTGTGATTTTTGCTGGTA 291
>seq5
Length=5663831
Score = 104 bits (114), Expect = 3e-17
Identities = 157/223 (70%), Gaps = 3/223 (1%)
Strand=Plus/Plus
Query 64627 CTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGG 64686
||||||| || || ||||| | || || | ||||| || || ||||| | ||
Sbjct 1930054 CTGTTCAACGCGATCGAGACCATTCCGTGCGTGAAGAAAAAAGCAGACTGGGCTTTGCGC 1930113
Query 64687 TGGATGAAT---CGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAA 64743
||||| | ||| |||| | ||| | | ||| | | || || || ||| |||
Sbjct 1930114 TGGATCGGTGACCGTCAGTCGCCATTTTGCGAACGTTTGGTCGCGTTCGCAGCTGTTGAA 1930173
Query 64744 GGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATG 64803
|| ||||||||||| || ||| || ||||||||| | |||||||| |||||||||
Sbjct 1930174 GGCATTTTCTTTTCCGGCAGCTTCGCGTCAATTTTCTGGTTGAAAAAGCGCGGCCTGATG 1930233
Query 64804 CCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGG 64846
|| ||| || |||| ||||||||||||||||| |||||||
Sbjct 1930234 CCCGGTTTGACGTTCAGCAACGAGCTGATCTCTCGTGACGAGG 1930276
Score = 82.4 bits (90), Expect = 9e-11
Identities = 89/117 (76%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 27394 AATATTACTATA-ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGA 27452
|||||| | || |||||||| ||||| || || || || || ||||| || ||| | ||
Sbjct 477015 AATATTTATTTAGATGCAAATATTTGTGAAAACTCTAACAGGAAAGACCATCACTTTGGA 476956
Query 27453 GGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509
|| ||| | ||||| ||| ||| ||||||||||||||||||||||||| ||
Sbjct 476955 AGTAGAGCCTTCTGATACAATTCAGAATGTGAAGGCTAAAATTCAGGACAAGGAAGG 476899
>seq5152
Length=332
Score = 91.5 bits (100), Expect = 2e-13
Identities = 108/144 (75%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| ||||| ||| |||||| | || || | || || || ||
Sbjct 328 AATGCAAATTTTTGTTAAGAC-CTTCACGGCAAAAG-ATCACCTTGGAAGTAGAACCATC 271
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| || | |||| |||| | |||||||| || || ||||||||||| || || ||
Sbjct 270 TGATACAATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCGGATCA 211
Query 27525 GCAGCGTCTAATTTTTGCTGGTAA 27548
|| ||| | ||||||||||||||
Sbjct 210 ACAACGTTTGATTTTTGCTGGTAA 187
>seq4234
Length=1659
Score = 82.4 bits (90), Expect = 9e-11
Identities = 89/117 (76%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 27394 AATATTACTATA-ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGA 27452
|||||| | || |||||||| ||||| || || || || || ||||| || ||| | ||
Sbjct 1155 AATATTTATTTAGATGCAAATATTTGTGAAAACTCTAACAGGAAAGACCATCACTTTGGA 1096
Query 27453 GGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509
|| ||| | ||||| ||| ||| ||||||||||||||||||||||||| ||
Sbjct 1095 AGTAGAGCCTTCTGATACAATTCAGAATGTGAAGGCTAAAATTCAGGACAAGGAAGG 1039
>seq3296
Length=842
Score = 82.4 bits (90), Expect = 9e-11
Identities = 110/153 (72%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 27396 TATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGT 27455
|||| ||| |||| || || || ||||| ||||| || || ||||| || || || ||
Sbjct 559 TATTCATATTATGCTTATATTCGTGAAGACACTTACTGGAAAAACTATAACACTAGAAGT 500
Query 27456 TGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCC 27515
||| || || | ||| | ||| | || |||||||||||| ||||| || |||||
Sbjct 499 TGAACCATCAGACACCATCGAGAATGTTAAAAGTAAAATTCAGGATAAGGAAGGCATTCC 440
Query 27516 TCCAGACCAGCAGCGTCTAATTTTTGCTGGTAA 27548
||| || ||||| | || | ||||| |||||
Sbjct 439 TCCTGATCAGCAAAGATTAGTCTTTGCAGGTAA 407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
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