Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20zimbabwensis_20[genbank_20GCA_5F001447665.1_202015-11- 24] 10,839 sequences; 50,795,114 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq389 122 7e-23 seq51 122 7e-23 seq308 118 9e-22 seq104 104 2e-17 seq53 102 7e-17 seq7731 100 2e-16 seq6644 91.5 1e-13 seq271 91.5 1e-13 >seq389 Length=4972 Score = 122 bits (134), Expect = 7e-23 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || | ||||| ||||| ||||| | ||||||||| | || Sbjct 4045 ATGCAAATTTTTGTTAAGACCCTCACCGGCAAAACCATCACTTTGGAAGTGGAACCATCC 3986 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||||||||| || ||||| |||||||| |||||| Sbjct 3985 GACACAATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCAGATCAA 3926 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||| | ||||||||||| Sbjct 3925 CAACGTTTGATATTTGCCGG 3906 Score = 109 bits (120), Expect = 5e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || | || || ||||| ||||| | ||||||||| | || Sbjct 4900 ATGCAAATTTTTGTTAAGACCCTCACTGGCAAAACCATCACTTTGGAAGTGGAACCATCC 4841 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||||||||||| || ||||| |||||||| |||||| Sbjct 4840 GACACAATTGAAAATGTGAAGGGTAAAATTCAAGATAAAGAGGGAATTCCACCGGATCAA 4781 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||||| || ||||| || Sbjct 4780 CAACGTCTCATTTTTGCTGG 4761 Score = 104 bits (114), Expect = 2e-17 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| |||||||| | || || ||||| ||||| | ||||||||| | || Sbjct 4616 ATGCAGATTTTCGTTAAAACGCTTACTGGGAAAACCATCACTTTGGAAGTGGAACCATCC 4557 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||||||||| || ||||| |||||||| ||||| Sbjct 4556 GACACAATAGAGAATGTGAAAGGTAAAATTCAAGATAAAGAGGGAATTCCACCAGATCAG 4497 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTA 22368 |||||| | || ||||| || || ||||| Sbjct 4496 CAACGTTTGATTTTTGCTGGTAAGTAGTTA 4467 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | || || ||||| ||||| | ||||| ||| | | Sbjct 3761 ATGCAAATTTTCGTTAAGACCCTCACTGGCAAAACCATCACTTTGGAAGTCGAACCATCT 3702 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||||||||| || ||||| |||||||| ||||| Sbjct 3701 GACACAATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCAGATCAG 3642 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||| | |||||||| || Sbjct 3641 CAACGTTTGATATTTGCTGG 3622 Score = 86.0 bits (94), Expect = 5e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | || || ||||| ||||| | ||||| ||| | | Sbjct 4333 ATGCAAATTTTCGTTAAGACCCTCACTGGCAAAACCATCACTTTGGAAGTCGAACCATCA 4274 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||| ||||| || || || |||||||| ||||| Sbjct 4273 GACACAATAGAAAATGTAAAAGGCAAAATACAAGATAAAGAAGGAATTCCACCAGATCAG 4214 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||| | |||||||| || Sbjct 4213 CAACGTTTGATATTTGCTGG 4194 >seq51 Length=255661 Score = 122 bits (134), Expect = 7e-23 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || | ||||| ||||| ||||| | ||||||||| | || Sbjct 928 ATGCAAATTTTTGTTAAGACCCTCACCGGCAAAACCATCACTTTGGAAGTGGAACCATCC 987 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||||||||| || ||||| |||||||| |||||| Sbjct 988 GACACAATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCAGATCAA 1047 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||| | ||||||||||| Sbjct 1048 CAACGTTTGATATTTGCCGG 1067 Score = 109 bits (120), Expect = 5e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || | || || ||||| ||||| | ||||||||| | || Sbjct 73 ATGCAAATTTTTGTTAAGACCCTCACTGGCAAAACCATCACTTTGGAAGTGGAACCATCC 132 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||||||||||| || ||||| |||||||| |||||| Sbjct 133 GACACAATTGAAAATGTGAAGGGTAAAATTCAAGATAAAGAGGGAATTCCACCGGATCAA 192 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||||| || ||||| || Sbjct 193 CAACGTCTCATTTTTGCTGG 212 Score = 104 bits (114), Expect = 2e-17 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| |||||||| | || || ||||| ||||| | ||||||||| | || Sbjct 357 ATGCAGATTTTCGTTAAAACGCTTACTGGGAAAACCATCACTTTGGAAGTGGAACCATCC 416 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||||||||| || ||||| |||||||| ||||| Sbjct 417 GACACAATAGAGAATGTGAAAGGTAAAATTCAAGATAAAGAGGGAATTCCACCAGATCAG 476 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTA 22368 |||||| | || ||||| || || ||||| Sbjct 477 CAACGTTTGATTTTTGCTGGTAAGTAGTTA 506 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | || || ||||| ||||| | ||||| ||| | | Sbjct 1212 ATGCAAATTTTCGTTAAGACCCTCACTGGCAAAACCATCACTTTGGAAGTCGAACCATCT 1271 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||||||||| || ||||| |||||||| ||||| Sbjct 1272 GACACAATAGAAAATGTGAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCAGATCAG 1331 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||| | |||||||| || Sbjct 1332 CAACGTTTGATATTTGCTGG 1351 Score = 86.0 bits (94), Expect = 5e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | || || ||||| ||||| | ||||| ||| | | Sbjct 640 ATGCAAATTTTCGTTAAGACCCTCACTGGCAAAACCATCACTTTGGAAGTCGAACCATCA 699 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||| ||||| || || || |||||||| ||||| Sbjct 700 GACACAATAGAAAATGTAAAAGGCAAAATACAAGATAAAGAAGGAATTCCACCAGATCAG 759 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||| | |||||||| || Sbjct 760 CAACGTTTGATATTTGCTGG 779 >seq308 Length=9352 Score = 118 bits (130), Expect = 9e-22 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | || || ||||| ||||| | ||||||||| | || Sbjct 337 ATGCAAATTTTCGTTAAGACCCTCACTGGCAAAACCATCACTTTGGAAGTGGAACCATCC 278 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||||||||| || ||||| |||||||| |||||| Sbjct 277 GACACAATAGAAAATGTAAAAGGCAAAATTCAAGATAAAGAGGGAATTCCACCAGATCAA 218 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTA 22368 |||||| | ||||||||||| || || ||| Sbjct 217 CAACGTTTGATATTTGCCGGTAAGCAATTA 188 Score = 102 bits (112), Expect = 7e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| |||||| | || || ||||| | ||||| ||||||||| || Sbjct 1312 AAAATGCAGATATTTGTGAAAACTCTCACTGGGAAAACCATTACTCTGGAAGTGGAACCC 1253 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || | | || || | ||| |||||||| || || ||||| |||||||||||| Sbjct 1252 TCAGACTCAATTGAAAATGTAAAAGGTAAAATTCAGGATAAAGAGGGGATTCCACCCGAT 1193 Query 22336 CAACAACGTCTTATATTTGCCGGCAA 22361 ||||| ||||| || ||||| || || Sbjct 1192 CAACAGCGTCTCATTTTTGCAGGTAA 1167 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | || || ||||| ||||| | ||||||||| | | Sbjct 9131 ATGCAAATTTTCGTTAAGACGCTTACTGGGAAAACCATCACTTTGGAAGTGGAACCATCT 9072 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || || ||||| |||||||| ||||| Sbjct 9071 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAAGAGGGAATTCCACCAGATCAG 9012 Query 22339 CAACGTCTTATATTTGCCGG 22358 || ||| | |||||||| || Sbjct 9011 CAGCGTTTGATATTTGCTGG 8992 >seq104 Length=152162 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | ||||| ||||| ||||| | ||||| ||| || || Sbjct 4142 ATGCAAATTTTCGTTAAGACCCTCACCGGCAAAACCATCACTTTGGAAGTCGAACCCTCC 4083 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||||||||| || || || |||||||| ||||| Sbjct 4082 GACACAATAGAGAATGTAAAAGGCAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAG 4023 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||| | |||||||| || Sbjct 4022 CAACGTTTGATATTTGCTGG 4003 Score = 102 bits (112), Expect = 7e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| |||||| | || || ||||| | ||||| ||||||||| || Sbjct 5114 AAAATGCAGATATTTGTGAAAACTCTCACTGGGAAAACCATTACTCTGGAAGTGGAACCC 5055 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || || | ||| |||||||| || || ||||| |||||||||||| Sbjct 5054 TCAGACACAATTGAAAATGTAAAAGGTAAAATTCAGGATAAAGAGGGAATTCCACCCGAT 4995 Query 22336 CAACAACGTCTTATATTTGCCGGCAA 22361 || || ||||| || ||||| || || Sbjct 4994 CAGCAGCGTCTGATCTTTGCTGGTAA 4969 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || | || || ||||| ||||| | ||||||||| | | Sbjct 3857 ATGCAAATTTTTGTTAAGACGCTTACTGGGAAAACCATCACTTTGGAAGTGGAACCATCT 3798 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || || ||||| |||||||| ||||| Sbjct 3797 GATACAATAGAGAATGTAAAAGGGAAAATACAGGATAAAGAGGGAATTCCACCAGATCAG 3738 Query 22339 CAACGTCTTATATTTGCCGG 22358 || ||| | |||||||| || Sbjct 3737 CAGCGTTTGATATTTGCTGG 3718 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| ||||| || ||||| |||| | ||||| || | | Sbjct 20467 ATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCATCT 20408 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || ||||||||||| ||||| |||||||| || ||||| Sbjct 20407 GATACGATTGAAAATGTGAAGGGTAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAG 20348 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 ||||| | |||||||| || || Sbjct 20347 CAACGATTGATATTTGCTGGTAA 20325 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| ||||| || ||||| |||| | ||||| || | | Sbjct 20754 ATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCATCT 20695 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || ||||||||||| ||||| || ||||| || ||||| Sbjct 20694 GATACGATTGAAAATGTGAAGGGTAAAATTCAAGATAAGGAAGGCATTCCTCCTGATCAG 20635 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 ||||| | |||||||| || || Sbjct 20634 CAACGATTGATATTTGCTGGTAA 20612 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| ||||| || ||||| |||| | ||||| || | | Sbjct 21041 ATGCAGATTTTTGTGAAAACATTAACTGGAAAAACAATCACATTGGAAGTAGAGCCATCT 20982 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || ||||||||||| ||||| || ||||| || ||||| Sbjct 20981 GATACGATTGAAAATGTGAAGGGTAAAATTCAAGATAAGGAAGGCATTCCTCCTGATCAG 20922 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 ||||| | |||||||| || || Sbjct 20921 CAACGATTGATATTTGCTGGTAA 20899 >seq53 Length=248793 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 12/230 (5%) Strand=Plus/Plus Query 128779 TTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCT 128838 ||||||||||| |||| |||||| | ||||||||||||| | |||||||||||| || Sbjct 131807 TTGTCCACGGTGAATTGAATAGCCGTCACTGCCGGCTTGGTTCTCAAATAGTACATCCCA 131866 Query 128839 GTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGT 128898 ||||||| ||| || ||||| || | || |||| ||||| || ||| |||| Sbjct 131867 GTTTTCAGACCTCTCTTCCAGCCGTAGAAATGCATCGACGTCAATTTAGCATAGTTGGG- 131925 Query 128899 TGACTCaaaaa----aaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGC 128954 |||| || |||||| || || || ||| |||||||| | || | ||||| Sbjct 131926 ---CTCAGCAATGTGAATATTCAACGACTGGGATTGGTCAATAAAAGCTCCCCTTTCGGC 131982 Query 128955 AGCCATACCAAT--CAAATTTTTCACTTTCATTTCCCACACCGTTTTGTA 129002 |||||| | || | |||||| |||||||| ||||| ||||| Sbjct 131983 AGCCATGTCTATGACGCATTTTT--GGGAAATTTCCCAAACCGTCTTGTA 132030 >seq7731 Length=250 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| ||||| ||||| | | | Sbjct 248 ATGCAGATCTTTGTCAAGACCCTTACAGGGAAGACCATCACCCTTGAGGTGGAGAGCTCT 189 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || |||||||||||||| ||||| || || Sbjct 188 GACACCATTGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAG 129 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||||||||| ||| | |||||| || ||| | | || ||||| Sbjct 128 CAGAGGCTTATCTTTGCCGGCAAGCAGCTCGAGGATGGGCGTACCCTGGCAGACTACAAT 69 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 68 ATCCAGAAGGAGTCTACC 51 >seq6644 Length=275 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | || || ||||| ||||| | ||||||||| | | Sbjct 242 ATGCAAATTTTCGTTAAGACGCTTACTGGGAAAACCATCACTTTGGAAGTGGAACCATCT 183 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || || ||||| |||||||| ||||| Sbjct 182 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAAGAGGGAATTCCACCAGATCAG 123 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 || ||| | || |||||||| || Sbjct 122 CAGCGTTTGATTTTTGCCGGTAA 100 >seq271 Length=23410 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | || || ||||| ||||| | ||||||||| | | Sbjct 222 ATGCAAATTTTCGTTAAGACGCTTACTGGGAAAACCATCACTTTGGAAGTGGAACCATCT 281 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || || ||||| |||||||| ||||| Sbjct 282 GATACAATAGAGAATGTAAAAGGCAAAATACAGGATAAAGAGGGAATTCCACCAGATCAG 341 Query 22339 CAACGTCTTATATTTGCCGG 22358 || ||| | |||||||| || Sbjct 342 CAGCGTTTGATATTTGCTGG 361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419672553800035