Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20zimbabwensis_20[genbank_20GCA_5F001447665.1_202015-11- 24] 10,839 sequences; 50,795,114 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq389 143 2e-29 seq308 143 2e-29 seq51 143 2e-29 seq104 140 3e-28 seq3104 118 8e-22 seq1633 118 8e-22 seq271 118 8e-22 seq6644 113 4e-20 seq6638 104 2e-17 seq4475 96.9 3e-15 seq7731 82.4 6e-11 >seq389 Length=4972 Score = 143 bits (158), Expect = 2e-29 Identities = 121/149 (81%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 |||||| |||| |||||||||||||| |||||||| || ||||| || |||||||||||| Sbjct 3897 AATTGCATACCGGCAAATATCAAACGTTGTTGATCTGGTGGAATTCCCTCTTTATCTTGA 3956 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||||||| | |||| ||||| || | ||||||||| | ||||| |||||| Sbjct 3957 ATTTTGCCTTTTACATTCTCTATTGTGTCGGATGGTTCCACTTCCAAAGTGATGGTTTTG 4016 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | || || ||||| || ||||| Sbjct 4017 CCGGTGAGGGTCTTAACAAAAATTTGCAT 4045 Score = 123 bits (136), Expect = 2e-23 Identities = 116/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 101322 ATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAA 101381 ||| | |||| |||||||||||||| || ||||| || ||||| || ||||||||||||| Sbjct 3614 ATTACATACCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAA 3673 Query 101382 TTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGC 101441 |||| ||| ||| |||||| |||||||| | ||| ||||| | ||||| ||||||| Sbjct 3674 TTTTGCCTTTCACATTTTCTATTGTGTCAGATGGTTCGACTTCCAAAGTGATGGTTTTGC 3733 Query 101442 CGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || | || || || || || ||||| Sbjct 3734 CAGTGAGGGTCTTAACGAAAATTTGCAT 3761 Score = 122 bits (134), Expect = 7e-23 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 |||| | |||| |||||||||||||| || ||||| || ||||| |||||||||||||| Sbjct 4184 CAATGACATACCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTG 4243 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||||| ||||||| |||||| ||||| || | ||| ||||| | ||||| ||||| Sbjct 4244 TATTTTGCCTTTTACATTTTCTATTGTGTCTGATGGTTCGACTTCCAAAGTGATGGTTTT 4303 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| || | || || || || || ||||| Sbjct 4304 GCCAGTGAGGGTCTTAACGAAAATTTGCAT 4333 Score = 122 bits (134), Expect = 7e-23 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 |||||| ||||| |||||||| || ||||| || ||||| || ||||||||||||||||| Sbjct 4473 CTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTT 4532 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| ||| | |||| ||||| || | ||||||||| | ||||| ||||| || || Sbjct 4533 ACCTTTCACATTCTCTATTGTGTCGGATGGTTCCACTTCCAAAGTGATGGTTTTCCCAGT 4592 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | ||||| || || ||||||||| Sbjct 4593 AAGCGTTTTAACGAAAATCTGCATG 4617 Score = 109 bits (120), Expect = 4e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| || | ||| |||||||| || ||||| || ||||||||||||||||| Sbjct 4759 TACCAGCAAAAATGAGACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTAC 4818 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 || ||| |||| | ||||| || | ||||||||| | ||||| |||||||| || | Sbjct 4819 CCTTCACATTTTCAATTGTGTCGGATGGTTCCACTTCCAAAGTGATGGTTTTGCCAGTGA 4878 Query 101448 AAGTTTTTACAAATATCTGCATG 101470 || || ||||| || |||||| Sbjct 4879 GGGTCTTAACAAAAATTTGCATG 4901 >seq308 Length=9352 Score = 143 bits (158), Expect = 2e-29 Identities = 121/149 (81%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||||||||| |||||||||||||| |||||||| || ||||| || |||||||||||| Sbjct 189 AATTGCTTACCGGCAAATATCAAACGTTGTTGATCTGGTGGAATTCCCTCTTTATCTTGA 248 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||||||| |||||| ||||| || | ||||||||| | ||||| |||||| Sbjct 249 ATTTTGCCTTTTACATTTTCTATTGTGTCGGATGGTTCCACTTCCAAAGTGATGGTTTTG 308 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || || || || ||||| Sbjct 309 CCAGTGAGGGTCTTAACGAAAATTTGCAT 337 Score = 140 bits (154), Expect = 3e-28 Identities = 119/147 (81%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382 || |||||||||||| || | ||||||||||||||| ||||| || |||||||| ||||| Sbjct 1163 TTACTTACCTGCAAAAATGAGACGCTGTTGATCGGGTGGAATCCCCTCTTTATCCTGAAT 1222 Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442 ||| ||||||| |||| | | ||| || | ||||||||| ||||| | ||||| || Sbjct 1223 TTTACCTTTTACATTTTCAATTGAGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCC 1282 Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||||| |||||||||||||| Sbjct 1283 AGTGAGAGTTTTCACAAATATCTGCAT 1309 Score = 118 bits (130), Expect = 8e-22 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 |||| | |||| ||||||||||||||||| ||||| || ||||| || |||||||| || Sbjct 8983 AATTACATACCAGCAAATATCAAACGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGT 9042 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||||||| | |||| || ||||| | ||||||||| | ||||| ||||| Sbjct 9043 ATTTTGCCTTTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAAGTGATGGTTTTC 9102 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || | || || || || || |||||| Sbjct 9103 CCAGTAAGCGTCTTAACGAAAATTTGCATG 9132 Score = 104 bits (114), Expect = 2e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| || | ||||||||||| || || ||||||||||| |||||||| || Sbjct 827 TACCAGCAAAAATAAGCCGCTGTTGATCTGGAGGGATGCCTTCTTTGTCTTGAATCTTAC 886 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 |||||| | || | || || |||| || ||||| || || | |||||| || || | Sbjct 887 TTTTTACGTTCTCAATTGTATCTGACGGCTCAACTTCTAGTGTAATCGTTTTTCCTGTCA 946 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 | || || |||||||||||||| Sbjct 947 ACGTCTTCACAAATATCTGCAT 968 >seq51 Length=255661 Score = 143 bits (158), Expect = 2e-29 Identities = 121/149 (81%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 |||||| |||| |||||||||||||| |||||||| || ||||| || |||||||||||| Sbjct 1076 AATTGCATACCGGCAAATATCAAACGTTGTTGATCTGGTGGAATTCCCTCTTTATCTTGA 1017 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||||||| | |||| ||||| || | ||||||||| | ||||| |||||| Sbjct 1016 ATTTTGCCTTTTACATTCTCTATTGTGTCGGATGGTTCCACTTCCAAAGTGATGGTTTTG 957 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | || || ||||| || ||||| Sbjct 956 CCGGTGAGGGTCTTAACAAAAATTTGCAT 928 Score = 123 bits (136), Expect = 2e-23 Identities = 116/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 101322 ATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAA 101381 ||| | |||| |||||||||||||| || ||||| || ||||| || ||||||||||||| Sbjct 1359 ATTACATACCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAA 1300 Query 101382 TTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGC 101441 |||| ||| ||| |||||| |||||||| | ||| ||||| | ||||| ||||||| Sbjct 1299 TTTTGCCTTTCACATTTTCTATTGTGTCAGATGGTTCGACTTCCAAAGTGATGGTTTTGC 1240 Query 101442 CGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || | || || || || || ||||| Sbjct 1239 CAGTGAGGGTCTTAACGAAAATTTGCAT 1212 Score = 122 bits (134), Expect = 7e-23 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 |||||| ||||| |||||||| || ||||| || ||||| || ||||||||||||||||| Sbjct 500 CTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTT 441 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| ||| | |||| ||||| || | ||||||||| | ||||| ||||| || || Sbjct 440 ACCTTTCACATTCTCTATTGTGTCGGATGGTTCCACTTCCAAAGTGATGGTTTTCCCAGT 381 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | ||||| || || ||||||||| Sbjct 380 AAGCGTTTTAACGAAAATCTGCATG 356 Score = 122 bits (134), Expect = 7e-23 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 |||| | |||| |||||||||||||| || ||||| || ||||| |||||||||||||| Sbjct 789 CAATGACATACCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTG 730 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||||| ||||||| |||||| ||||| || | ||| ||||| | ||||| ||||| Sbjct 729 TATTTTGCCTTTTACATTTTCTATTGTGTCTGATGGTTCGACTTCCAAAGTGATGGTTTT 670 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| || | || || || || || ||||| Sbjct 669 GCCAGTGAGGGTCTTAACGAAAATTTGCAT 640 Score = 109 bits (120), Expect = 4e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| || | ||| |||||||| || ||||| || ||||||||||||||||| Sbjct 214 TACCAGCAAAAATGAGACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTAC 155 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 || ||| |||| | ||||| || | ||||||||| | ||||| |||||||| || | Sbjct 154 CCTTCACATTTTCAATTGTGTCGGATGGTTCCACTTCCAAAGTGATGGTTTTGCCAGTGA 95 Query 101448 AAGTTTTTACAAATATCTGCATG 101470 || || ||||| || |||||| Sbjct 94 GGGTCTTAACAAAAATTTGCATG 72 >seq104 Length=152162 Score = 140 bits (154), Expect = 3e-28 Identities = 119/147 (81%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382 || |||||| ||||| |||| |||||| |||||||| ||||| || |||||||| ||||| Sbjct 4965 TTACTTACCAGCAAAGATCAGACGCTGCTGATCGGGTGGAATTCCCTCTTTATCCTGAAT 5024 Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442 ||| ||||||| |||| | ||||| || | ||||||||| ||||| | ||||| || Sbjct 5025 TTTACCTTTTACATTTTCAATTGTGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCC 5084 Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||||| |||||||||||||| Sbjct 5085 AGTGAGAGTTTTCACAAATATCTGCAT 5111 Score = 125 bits (138), Expect = 6e-24 Identities = 125/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 |||| | |||| ||||||||||||||||| ||||| || ||||| || |||||||| || Sbjct 3709 AATTACATACCAGCAAATATCAAACGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGT 3768 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||||||| | |||| || ||||| | ||||||||| | ||||| ||||| Sbjct 3769 ATTTTCCCTTTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAAGTGATGGTTTTC 3828 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 || || | || || ||||| || |||||| | | |||||| Sbjct 3829 CCAGTAAGCGTCTTAACAAAAATTTGCATGCCTCCCCGAAGA 3870 Score = 125 bits (138), Expect = 6e-24 Identities = 113/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| |||||||||||||| || ||||| || ||||| |||||||||||||||||||| Sbjct 4001 TACCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGC 4060 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||||||| | |||| ||||| || | ||| ||||| | ||||| ||||||||||| | Sbjct 4061 CTTTTACATTCTCTATTGTGTCGGAGGGTTCGACTTCCAAAGTGATGGTTTTGCCGGTGA 4120 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 || || || || || ||||| Sbjct 4121 GGGTCTTAACGAAAATTTGCAT 4142 Score = 118 bits (130), Expect = 8e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||||||||| || || ||||| || ||||||||||| |||||||||||||| Sbjct 20612 TTACCAGCAAATATCAATCGTTGCTGATCAGGAGGAATGCCTTCCTTATCTTGAATTTTA 20671 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| |||| | || ||||| | || ||||| | |||| ||||| || ||| Sbjct 20672 CCCTTCACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTT 20731 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || ||||| ||||| |||||||| Sbjct 20732 AATGTTTTCACAAAAATCTGCAT 20754 Score = 118 bits (130), Expect = 8e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||||||||| || || ||||| || ||||||||||| |||||||||||||| Sbjct 20899 TTACCAGCAAATATCAATCGTTGCTGATCAGGAGGAATGCCTTCCTTATCTTGAATTTTA 20958 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| |||| | || ||||| | || ||||| | |||| ||||| || ||| Sbjct 20959 CCCTTCACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTT 21018 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || ||||| ||||| |||||||| Sbjct 21019 AATGTTTTCACAAAAATCTGCAT 21041 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||||||||| || || ||||| || ||||| ||||| |||||||||||||| Sbjct 20325 TTACCAGCAAATATCAATCGTTGCTGATCAGGAGGAATACCTTCCTTATCTTGAATTTTA 20384 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| |||| | || ||||| | || ||||| | |||| ||||| || ||| Sbjct 20385 CCCTTCACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTT 20444 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || ||||| ||||| |||||||| Sbjct 20445 AATGTTTTCACAAAAATCTGCAT 20467 Score = 105 bits (116), Expect = 5e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||||||||| || || | || ||||| || ||||||||||| ||||| |||||||| Sbjct 21331 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 21390 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| |||| | ||||| || | ||| ||||| || || | ||||| || || Sbjct 21391 CTTTTGACATTTTCAATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 21450 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||| || || ||||||||||| Sbjct 21451 AGAGTCTTCACGAATATCTGCAT 21473 Score = 104 bits (114), Expect = 2e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| || | ||||||||||| || || ||||||||||| |||||||| || Sbjct 4629 TACCAGCAAAAATAAGCCGCTGTTGATCTGGAGGGATGCCTTCTTTGTCTTGAATCTTAC 4688 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 |||||| | || | || || || | || |||||||| || | |||||| || || | Sbjct 4689 TTTTTACGTTCTCAATTGTATCTGATGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCA 4748 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 | || || |||||||||||||| Sbjct 4749 ACGTCTTCACAAATATCTGCAT 4770 >seq3104 Length=412 Score = 118 bits (130), Expect = 8e-22 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 |||| | |||| ||||| ||||||||||| ||||| || ||||| || |||||||| || Sbjct 195 CAATGACATACCGGCAAAAATCAAACGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTG 254 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||||| ||||||| | |||| || ||||| | ||||||||| | ||||| ||||| Sbjct 255 TATTTTGCCTTTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAAGTGATGGTTTT 314 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| || | || || || ||||| ||||| Sbjct 315 GCCAGTGAGGGTCTTAACGAATATTTGCAT 344 >seq1633 Length=565 Score = 118 bits (130), Expect = 8e-22 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 |||| | |||| ||||| ||||||||||| ||||| || ||||| || |||||||| || Sbjct 371 CAATGACATACCGGCAAAAATCAAACGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTG 312 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||||| ||||||| | |||| || ||||| | ||||||||| | ||||| ||||| Sbjct 311 TATTTTGCCTTTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAAGTGATGGTTTT 252 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| || | || || || ||||| ||||| Sbjct 251 GCCAGTGAGGGTCTTAACGAATATTTGCAT 222 Score = 82.4 bits (90), Expect = 6e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||||| | |||| ||||||||||||||||| ||||| || ||||| || |||||||| || Sbjct 84 CAATTACATACCAGCAAATATCAAACGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTG 25 Query 101380 AATTTTTTGTTTTACAATTTCTA 101402 ||||| ||||||| | |||| Sbjct 24 TATTTTCCCTTTTACATTCTCTA 2 >seq271 Length=23410 Score = 118 bits (130), Expect = 8e-22 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 |||| | |||| ||||||||||||||||| ||||| || ||||| || |||||||| || Sbjct 370 AATTACATACCAGCAAATATCAAACGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGT 311 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||||||| | |||| || ||||| | ||||||||| | ||||| ||||| Sbjct 310 ATTTTGCCTTTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAAGTGATGGTTTTC 251 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || | || || || || || |||||| Sbjct 250 CCAGTAAGCGTCTTAACGAAAATTTGCATG 221 >seq6644 Length=275 Score = 113 bits (124), Expect = 4e-20 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 |||||| ||||| ||||||||||| ||||| || ||||| || |||||||| || ||||| Sbjct 99 CTTACCGGCAAAAATCAAACGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGTATTTT 158 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||||||| | |||| || ||||| | ||||||||| | ||||| ||||| || || Sbjct 159 GCCTTTTACATTCTCTATTGTATCAGATGGTTCCACTTCCAAAGTGATGGTTTTCCCAGT 218 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | || || || || || |||||| Sbjct 219 AAGCGTCTTAACGAAAATTTGCATG 243 >seq6638 Length=275 Score = 104 bits (114), Expect = 2e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 |||| |||||| ||||| ||||||||||| ||||| || ||||| ||||||||||| || Sbjct 165 CAATGACTTACCGGCAAAAATCAAACGCTGCTGATCTGGTGGAATTCCTTCTTTATCCTG 224 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTC 101424 |||||| ||| |||||||| | || ||||| | ||||||||| Sbjct 225 AATTTTACCTTTCACAATTTCAATTGTATCAGATGGTTCCACTTC 269 >seq4475 Length=347 Score = 96.9 bits (106), Expect = 3e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 |||| | |||| ||||||||||||||||| ||||| || ||||| || |||||||| || Sbjct 101 AATTACATACCAGCAAATATCAAACGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGT 42 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421 |||||| ||||||| | |||| || ||||| | |||||| Sbjct 41 ATTTTTCCTTTTACATTCTCTATTGTATCAGATGGTTCCAC 1 >seq7731 Length=250 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||||||||| || || || |||||||| || || | || | |||| || | ||| Sbjct 46 TGAAGGGTAGACTCCTTCTGGATATTGTAGTCTGCCAGGGTACGCCCATCCTCGAGCTGC 105 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | | ||| || || || || || || || || || || || || Sbjct 106 TTGCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTA 165 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | |||||||| | ||||| ||||| |||| || || || || Sbjct 166 GCCTTGACGTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTCCCTGTA 225 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| |||||||| Sbjct 226 AGGGTCTTGACAAAGATCTGCAT 248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396226051499523