Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20zimbabwensis_20[genbank_20GCA_5F001447665.1_202015-11- 24] 10,839 sequences; 50,795,114 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq3 327 7e-84 seq99 113 3e-19 seq127 100 2e-15 seq389 98.7 6e-15 seq51 98.7 6e-15 seq308 96.9 2e-14 seq176 95.1 8e-14 seq104 95.1 8e-14 seq10 91.5 1e-12 >seq3 Length=883620 Score = 327 bits (362), Expect = 7e-84 Identities = 442/611 (72%), Gaps = 11/611 (2%) Strand=Plus/Plus Query 474317 ATGTCCAGAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGG 474376 ||||| | | ||| ||||| |||||||| || ||||| ||||||||||| | || | Sbjct 579412 ATGTCGAAGAATGCTATTGGAATTGATTTGGGTACTACCTACAGTTGTGTTGGCGTGTTC 579471 Query 474377 CAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATAT 474436 || |||||||||| ||||| ||||| || || ||||| ||| | || || ||| ||| Sbjct 579472 CAGCATGGTAAAGTTGAAATTATTGCAAACGATCAAGGGAATCGTACCACGCCAAGTTAT 579531 Query 474437 GTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCT 474496 ||| |||| || || || |||| || ||||| ||||| || || |||| | ||| | Sbjct 579532 GTTGCTTTCACCGATACCGAACGACTGATTGGCGATGCGGCAAAGAATCAGGTTGCGTTG 579591 Query 474497 AATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACC 474556 |||||| |||||| |||||||||| || || | || |||||| ||||||||| | Sbjct 579592 AATCCTCATAATACAGTTTTTGATGCGAAGCGACTTATCGGTCGTCGATTTGATGATGCT 579651 Query 474557 ACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCA 474616 |||| || ||||| ||| |||||||| ||||| || || |||| ||| ||||| Sbjct 579652 GCTGTGCAGTCTGACATGAAACATTGGCCATTTAAAGTTATCAATGATGGAACGAAACCT 579711 Query 474617 TATATAGAAG--CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTT 474674 | || ||| |||||| ||| || | || |||| |||||||| |||| Sbjct 579712 AAAATTCAAGTCGAATACA--AAGGCGAGTCGAAGTCATTTACACCGGAAGAAATCAGCG 579769 Query 474675 CAATGGTTTTAGCCAAAATGAAACAAACCGC--GAGCTCATATCTTGGACAAGAAGTAAC 474732 | ||||| |||| || ||||| |||| || |||| ||| | ||| || || | Sbjct 579770 CTATGGTGTTAGTGAAGATGAAGGAAACTGCCGAAGCT--TATTTGGGAAAAACTGTTAA 579827 Query 474733 TGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGA 474792 || || |||||||||||||| ||||||||||| |||||||| ||||| || || ||||| Sbjct 579828 GGACGCCGTAATTACTGTTCCGGCATATTTTAACGATTCTCAGCGTCAGGCGACCAAAGA 579887 Query 474793 TGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGC 474852 || |||| ||| | ||| | |||||||| || ||||| || ||||||||||| || || Sbjct 579888 CGCTGGAACGATTTCTGGTTTGAATGTTTTGCGAATTATCAACGAACCAACAGCGGCTGC 579947 Query 474853 ACTTGCTTATGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGA--- 474909 | |||||||||| ||||||| || || | ||| ||||||| | || ||||| Sbjct 579948 AATTGCTTATGGACTTGATAGAAAGGGTGGCGGTGAACGAAATGTTCTGATATTTGACCT 580007 Query 474910 TTGTGGAGGTA 474920 | |||| |||| Sbjct 580008 TGGTGGTGGTA 580018 >seq99 Length=156952 Score = 113 bits (124), Expect = 3e-19 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 474638 GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAA 474697 ||||||| ||| || | || ||| ||||||| | |||||||| ||||||||| Sbjct 105550 GGTGAAAAGAAATTGTTCACTCCCGAAGAAATTTCAGCGATGGTTTTGTTGAAAATGAAA 105609 Query 474698 CAAACCGCG--AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAG 474755 ||| || |||| ||| | || ||||||| | |||| || | || ||||| | Sbjct 105610 GAAATTGCCGAAGCT--TATTTGGGCAAAGAAGTGAAAAATGCCGTCGTCACGGTTCCTG 105667 Query 474756 CATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTA 474815 | ||||| || ||| | ||||||||||| || ||||||||||| | ||||| ||||||| Sbjct 105668 CTTATTTCAACGATGCACAACGTCAAGCTACCAAAGATGCGGGCACCATTGCTGGTCTTA 105727 Query 474816 ATGTTTTACGTATTATTAATGAACC 474840 |||| | || || || |||||||| Sbjct 105728 ATGTAGTTCGAATCATCAATGAACC 105752 Score = 111 bits (122), Expect = 1e-18 Identities = 246/366 (67%), Gaps = 6/366 (2%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 |||||||| ||||||||||| || || ||||| || ||||| | | | || ||| || Sbjct 106511 AATCCTGACGAAGCTGTTGCCTACGGTGCTGCGGTACAAGCTGGCGTAATTTCTGGTGAA 106570 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 || ||| ||| | || |||| || | || || | ||| | | || || || Sbjct 106571 ---GA--AGATACTGG-TGATCTTGTGCTGTTGGATGTCAATCCGTTGACTTTGGGAATT 106624 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA 475972 ||||| ||||| || | ||||| || || ||| ||| ||||| | || ||| Sbjct 106625 GAAACTGTTGGCGGAGTGATGACGAAACTGATTCCCAGGAATACGGTAGTGCCGACCAAG 106684 Query 475973 AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032 ||||| | |||| ||| | | || ||||| | || || || || ||| | || Sbjct 106685 AAATCGCAGATATTCAGCACCGCTGCCGACAATCAGCCCACGGTTACTATTCAAGTTTTC 106744 Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092 ||||| ||| || | | || ||||| ||| || ||||| | || ||||| || Sbjct 106745 GAAGGCGAACGACCAATGACAAAAGACAATCACCTTCTTGGCAAGTTCGATCTTACTGGC 106804 Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152 || ||||| ||||| | || || || ||||||||||| || || |||||||||| ||| Sbjct 106805 ATACCTCCGGCTCCTCGCGGTGTGCCACAAATTGAAGTCACATTCGATATTGATGTGAAT 106864 Query 476153 GGTATT 476158 || ||| Sbjct 106865 GGCATT 106870 Score = 93.3 bits (102), Expect = 3e-13 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 290852 GGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAATCTAAAGTTGCC 290911 |||||||| || |||| | ||||| |||||| ||||| | ||| |||| || || Sbjct 105752 GGTTCATTGATGATTCGAACTACATTAAGACCAGCAATGGTGCCCGCATCTTTGGTAGCT 105693 Query 290912 TGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCtttttccactttcttt 290971 || ||||| ||||| || ||||||||||| || || | || || |||| ||||| || Sbjct 105692 TGACGTTGTGCATCGTTGAAATAAGCAGGAACCGTGACGACGGCATTTTTCACTTCTTTG 105633 Query 290972 ttcaaataattttctgccatttgttttattt 291002 ||||||| ||| || |||| ||| |||| Sbjct 105632 CCCAAATAAGCTTCGGCAATTTCTTTCATTT 105602 >seq127 Length=124226 Score = 100 bits (110), Expect = 2e-15 Identities = 166/235 (71%), Gaps = 5/235 (2%) Strand=Plus/Plus Query 296072 GAATTGGAAGATGGATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGG 296131 || |||| ||||||| ||| |||| ||||| |||||||| | || || ||| |||| Sbjct 68723 GACTTGGTCGATGGATAGATTTTAAAAATGATTATAAAACTTTATATCCAAGTTTCATGG 68782 Query 296132 AATCTGTTATTTGGTCATTTAAACAACTTTATGA-AAAGGAAATGATTTTTGAAGGTTAT 296190 ||||||| ||| ||| ||||| || ||| | ||||| || | | |||| Sbjct 68783 AATCTGTATGGTGGGTATTCAAACAGCTGTATAACAAAGGTCTTG-TCTACAGAGGTGTA 68841 Query 296191 AAAGTTATGCCTTATTCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAA 296250 ||||| ||||| | |||||||| |||| || ||||| || ||||||| | |||| Sbjct 68842 AAAGTGATGCCATTTTCTACTGCTTGCGGAACTCCATTGTCAAATTTTGAATCTGGACAA 68901 Query 296251 AATTATAAAGAGATTATTGATCCATCT-GTTACTTGTTGTTTTGAAATTATTTCT 296304 ||||| ||||| | |||||||| || |||| | || ||| || || ||||| Sbjct 68902 AATTACAAAGAAGTCATTGATCCTGCTAGTTAGTAATTCTTT--AATTTGTTTCT 68954 >seq389 Length=4972 Score = 98.7 bits (108), Expect = 6e-15 Identities = 106/138 (77%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 ||||||||||| |||||||||||||| || |||||||| || || |||||||| || Sbjct 4761 CCAGCAAAAATGAGACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTACCC 4820 Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| |||||| || || | || | | || ||| || || ||||| || ||||| Sbjct 4821 TTCACATTTTCAATTGTGTCGGATGGTTCCACTTCCAA-AGTGATGGTTTTGCCAGTGAG 4879 Query 480752 AGTCTTAACGAAAATTTG 480769 |||||||| |||||||| Sbjct 4880 GGTCTTAACAAAAATTTG 4897 Score = 93.3 bits (102), Expect = 3e-13 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||| || | |||||| ||||| || |||||||| || || |||||||| || | Sbjct 3622 CCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCT 3681 Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||| || || |||| || | | || ||| | | || ||||| || ||||| Sbjct 3682 TTCACATTTTCTATTGTGTCAGATGGTTCGACTTCCAAAG-TGATGGTTTTGCCAGTGAG 3740 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||||||||||| Sbjct 3741 GGTCTTAACGAAAATTTG 3758 Score = 89.7 bits (98), Expect = 3e-12 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||| || | |||||| ||||| || ||||||||||| || ||||| || || | Sbjct 4194 CCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTATTTTGCCT 4253 Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||| || || || | || | | || ||| || || ||||| || ||||| Sbjct 4254 TTTACATTTTCTATTGTGTCTGATGGTTCGACTTCCAA-AGTGATGGTTTTGCCAGTGAG 4312 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||||||||||| Sbjct 4313 GGTCTTAACGAAAATTTG 4330 Score = 87.8 bits (96), Expect = 1e-11 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 480626 TTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAAT 480685 |||| | || ||||| || | |||||||||||| || |||||||| || || |||||||| Sbjct 3899 TTGCATACCGGCAAATATCAAACGTTGTTGATCTGGTGGAATTCCCTCTTTATCTTGAAT 3958 Query 480686 CTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTAC 480744 || ||| ||| || || || || | || | | || ||| || || ||||| | Sbjct 3959 TTTGCCTTTTACATTCTCTATTGTGTCGGATGGTTCCACTTCCAA-AGTGATGGTTTTGC 4017 Query 480745 CGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||| |||||||| |||||||| Sbjct 4018 CGGTGAGGGTCTTAACAAAAATTTG 4042 >seq51 Length=255661 Score = 98.7 bits (108), Expect = 6e-15 Identities = 106/138 (77%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 ||||||||||| |||||||||||||| || |||||||| || || |||||||| || Sbjct 212 CCAGCAAAAATGAGACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTACCC 153 Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| |||||| || || | || | | || ||| || || ||||| || ||||| Sbjct 152 TTCACATTTTCAATTGTGTCGGATGGTTCCACTTCCAA-AGTGATGGTTTTGCCAGTGAG 94 Query 480752 AGTCTTAACGAAAATTTG 480769 |||||||| |||||||| Sbjct 93 GGTCTTAACAAAAATTTG 76 Score = 93.3 bits (102), Expect = 3e-13 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||| || | |||||| ||||| || |||||||| || || |||||||| || | Sbjct 1351 CCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCT 1292 Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||| || || |||| || | | || ||| | | || ||||| || ||||| Sbjct 1291 TTCACATTTTCTATTGTGTCAGATGGTTCGACTTCCAAAG-TGATGGTTTTGCCAGTGAG 1233 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||||||||||| Sbjct 1232 GGTCTTAACGAAAATTTG 1215 Score = 89.7 bits (98), Expect = 3e-12 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||| || | |||||| ||||| || ||||||||||| || ||||| || || | Sbjct 779 CCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGTATTTTGCCT 720 Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||| || || || | || | | || ||| | | || ||||| || ||||| Sbjct 719 TTTACATTTTCTATTGTGTCTGATGGTTCGACTTCCAAAG-TGATGGTTTTGCCAGTGAG 661 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||||||||||| Sbjct 660 GGTCTTAACGAAAATTTG 643 Score = 87.8 bits (96), Expect = 1e-11 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 480626 TTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAAT 480685 |||| | || ||||| || | |||||||||||| || |||||||| || || |||||||| Sbjct 1074 TTGCATACCGGCAAATATCAAACGTTGTTGATCTGGTGGAATTCCCTCTTTATCTTGAAT 1015 Query 480686 CTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTAC 480744 || ||| ||| || || || || | || | | || ||| || || ||||| | Sbjct 1014 TTTGCCTTTTACATTCTCTATTGTGTCGGATGGTTCCACTTCCAA-AGTGATGGTTTTGC 956 Query 480745 CGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||| |||||||| |||||||| Sbjct 955 CGGTGAGGGTCTTAACAAAAATTTG 931 >seq308 Length=9352 Score = 96.9 bits (106), Expect = 2e-14 Identities = 110/145 (76%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 480626 TTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAAT 480685 |||||| || ||||| || | |||||||||||| || |||||||| || || |||||||| Sbjct 191 TTGCTTACCGGCAAATATCAAACGTTGTTGATCTGGTGGAATTCCCTCTTTATCTTGAAT 250 Query 480686 CTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTAC 480744 || ||| ||| ||| || || || | || | | || ||| || || ||||| | Sbjct 251 TTTGCCTTTTACATTTTCTATTGTGTCGGATGGTTCCACTTCCAA-AGTGATGGTTTTGC 309 Query 480745 CGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||| ||||||||||||||||| Sbjct 310 CAGTGAGGGTCTTAACGAAAATTTG 334 Score = 86.0 bits (94), Expect = 4e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||||||||| || |||||||| ||||| || ||||| |||||||||||||| | Sbjct 829 CCAGCAAAAATAAGCCGCTGTTGATCTGGAGGGATGCCTTCTTTGTCTTGAATCTTACTT 888 Query 480693 TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGA 480752 || || ||||| ||||| | | | ||| || ||||| ||||| || || | Sbjct 889 TTTACGTTCTCAATTGTATCTGACGGCTCAACTTCTAGTGTAATCGTTTTTCCTGTCAAC 948 Query 480753 GTCTTAACGAAAATTTG 480769 ||||| || || || || Sbjct 949 GTCTTCACAAATATCTG 965 >seq176 Length=85284 Score = 95.1 bits (104), Expect = 8e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 299112 CTGAAGAAGAGATTAAAAAAGCTTATAAAAAATTAGCTATGAAATATCATCCTGACAGAA 299171 ||||||| || || |||||||||||| || | || |||||||||||||||||| | Sbjct 77504 CTGAAGATGAAATCAAAAAAGCTTATCGGAAGATGGCGTTGAAATATCATCCTGACAAGA 77445 Query 299172 ATAAAAGTCCTGAAGCGGAAGAAAAGTTTaaaaaaaTAAGTCATGCTTATAGTATTCTTT 299231 | ||||| ||||| || ||| || |||||| | || | || || | |||| Sbjct 77444 ACAAAAGCCCTGATGCAGAAAGCAAATTTAAAGAGATTGCAGAAGCATACGATGTTCTGA 77385 Query 299232 CAGATCCAACCAAAAAAGAAGTATATGATAAATTTGGAGAAGAAGGATTAAATTCAGGAA 299291 ||| | | || |||||| |||| ||||||||||| |||||||| || || || | Sbjct 77384 GTGATGCTAAAAAGAAAGAAATATACGATAAATTTGGTGAAGAAGGCTTGAAAGGTGGGA 77325 Query 299292 TGAGTGATGG 299301 ||| || ||| Sbjct 77324 TGAATGCTGG 77315 >seq104 Length=152162 Score = 95.1 bits (104), Expect = 8e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||| || | |||||| ||||| || ||||||||||| || |||||||| || | Sbjct 4003 CCAGCAAATATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGCCT 4062 Query 480693 TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGA 480752 || ||| || || || || | | || ||| | || || ||||| |||||||| Sbjct 4063 TTTACATTCTCTATTGTGTCGGAGGGTTCGACTTCCAAAGTGATGGTTTTGCCGGTGAGG 4122 Query 480753 GTCTTAACGAAAATTTG 480769 ||||||||||||||||| Sbjct 4123 GTCTTAACGAAAATTTG 4139 Score = 93.3 bits (102), Expect = 3e-13 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||||||||| || |||||||| ||||| || ||||| |||||||||||||| | Sbjct 4631 CCAGCAAAAATAAGCCGCTGTTGATCTGGAGGGATGCCTTCTTTGTCTTGAATCTTACTT 4690 Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || || ||||| ||||| | || | || |||||| ||||| ||||| || || | Sbjct 4691 TTTACGTTCTCAATTGTATCTGATGGCTCAA-CTTCAAGTGTAATCGTTTTTCCTGTCAA 4749 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||| || || || || Sbjct 4750 CGTCTTCACAAATATCTG 4767 Score = 91.5 bits (100), Expect = 1e-12 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 480630 TTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTT 480689 || || ||||| || | | ||| |||||||||||||| |||||||| || ||||| || Sbjct 21331 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 21390 Query 480690 TGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTG 480749 ||||||| |||||| || || | || | ||| || || |||||||| || || Sbjct 21391 CTTTTGACATTTTCAATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 21450 Query 480750 AGAGTCTTAACGAAAATTTG 480769 |||||||| ||||| || || Sbjct 21451 AGAGTCTTCACGAATATCTG 21470 >seq10 Length=507062 Score = 91.5 bits (100), Expect = 1e-12 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149 ||||| ||||| || || | |||||||| ||||| |||||| ||||||||||||||||| Sbjct 248580 GGTATACCTCCGGCCCCTCGTGGAGTTCCACAAATAGAAGTTGCTTTTGATATTGATGCA 248521 Query 476150 AATGGTATTCTTAATGTTACTGCTTGTGAT 476179 |||||||| || |||| | |||| | ||| Sbjct 248520 AATGGTATAGTTCATGTCAGTGCTCGAGAT 248491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267714262699172