Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20zimbabwensis_20[genbank_20GCA_5F001447665.1_202015-11- 24] 10,839 sequences; 50,795,114 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq7731 118 1e-21 >seq7731 Length=250 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| |||||||| || ||| || | ||||||||||||||||| Sbjct 51 GGTAGACTCCTTCTGGATATTGTAGTCTGCCAGGGTACGCCCATCCTCGAGCTGCTTGCC 110 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| || ||||| || |||||||| |||||| ||| Sbjct 111 GGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTAGCCTT 170 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||| | | |||||| || | ||||| ||| || || || || || Sbjct 171 GACGTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTCCCTGTAAGGGT 230 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 231 CTTGACAAAGATCTGCAT 248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483355302524360