Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20muris_20[genbank_20GCA_5F000612645.1_202014-03-26] 1,683 sequences; 84,405,302 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq69 89.7 5e-13 >seq69 Length=365491 Score = 89.7 bits (98), Expect = 5e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 16471 TATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTG 16530 ||| || || |||||||| | ||||||||||| ||||| |||||||| |||||||| || Sbjct 157131 TATGTAAGTGTCAATCAGCAGGCTGTACATTTCCGAGTGGATGTTCTCGATGGCTATTTG 157190 Query 16531 AAATCCATAGAAGCATCGAGCCTC 16554 ||| || || ||||| |||||||| Sbjct 157191 AAAGCCGTAAAAGCAGCGAGCCTC 157214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511403641119560