Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20muris_20[genbank_20GCA_5F000612645.1_202014-03-26] 1,683 sequences; 84,405,302 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq21 98.7 1e-15 >seq21 Length=749496 Score = 98.7 bits (108), Expect = 1e-15 Identities = 89/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || |||||||| ||||| | |||||| ||||||||||| | |||||| || ||| | Sbjct 57293 ATCTCGGTGCACAAATTTGAGCACTTAATCGTGCCCAAGTTTTGTTGATTCGATTTTCGG 57352 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACT 118875 || || || |||||||||| |||| | || || |||||||| |||| |||| Sbjct 57353 TTGCAAGCGTCCTTGTAAACCATGAACGGAGTGCCCGTCTCGATTTGCGACT 57404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618422189669480