Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20suis_20[genbank_20GCA_5F000797535.1_202014-12-09] 306 sequences; 63,839,715 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq18 91.5 1e-13 >seq18 Length=1129065 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 101699 ACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACA 101758 ||||| ||||||||||| |||| ||||| ||||| || |||| || | ||| | | Sbjct 426500 ACATAAATGTGAGCATCGCCTAACGTATGAATAAAGTCGCCAGCTCGTAAACCAGTAATA 426441 Query 101759 TGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||||| ||||||| |||||| || ||||| || || ||||||||||| || || Sbjct 426440 TGAGCCATCATGCGAGTTAACAGCGAATAACTTGCTATGTTAAATGGTACCCC 426388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361249852758806