Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20suis_20[genbank_20GCA_5F000797535.1_202014-12-09] 306 sequences; 63,839,715 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq18 114 9e-21 >seq18 Length=1129065 Score = 114 bits (126), Expect = 9e-21 Identities = 101/126 (80%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 97057 TGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCA 97116 || |||||||||||||||||||| ||||| || |||||||| || |||| |||| || Sbjct 426506 TGGTTCACATAAATGTGAGCATCGCCTAACGTATGAATAAAGTCGCCAGCTCGTAAACCA 426447 Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 || | ||| || ||||| | |||||| || ||||| || || |||||||| || ||||| Sbjct 426446 GTAATATGAGCCATCATGCGAGTTAACAGCGAATAACTTGCTATGTTAAATGGTACCCCA 426387 Query 97177 AGTCCC 97182 |||||| Sbjct 426386 AGTCCC 426381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346782706712420