Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20suis_20[genbank_20GCA_5F000797535.1_202014-12-09] 306 sequences; 63,839,715 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq24 89.7 3e-13 >seq24 Length=829597 Score = 89.7 bits (98), Expect = 3e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||| | ||| |||| || || || |||||||||||||||||||||||||| Sbjct 294477 CCGCCCCGCAGTCGCAGAACCAAATGCAACGTGCTTTCTTTCTGTATGTTGTAGTCGGAA 294418 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259 || ||| |||| |||| |||||| |||| ||||| Sbjct 294417 AGAGTACGCCCGTCTTCCAGCTGCTTACCTGAGAAAA 294381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323070795143360