Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20suis_20[genbank_20GCA_5F000797535.1_202014-12-09] 306 sequences; 63,839,715 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq24 82.4 6e-11 >seq24 Length=829597 Score = 82.4 bits (90), Expect = 6e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| ||||| || ||||| |||||||||||||||||||| ||||| ||| | Sbjct 293051 AATGCAGATTTTCGTGAAAACACTCACGGGAAAAACCATTACGCTCGAAGTTGAGCCGTC 293110 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||| | ||| | | || || | |||||| |||||||||||| | ||| ||||| Sbjct 293111 CGACTCGATTGAAAATGTGAAGAATAAAATTCAAGATAAAGAAGGCATTCCCCCGGATCA 293170 Query 115405 GCA 115407 ||| Sbjct 293171 GCA 293173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425342413732720