Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20suis_20[genbank_20GCA_5F000797535.1_202014-12-09] 306 sequences; 63,839,715 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq24 82.4 7e-11 >seq24 Length=829597 Score = 82.4 bits (90), Expect = 7e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 131095 CCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC 131154 |||||| |||| | ||||||||| ||||| || || |||||||| || ||||| | | Sbjct 293191 CCTGCGAAGATCAGACGCTGCTGATCCGGGGGAATGCCTTCTTTATCTTGAATTTTATTC 293132 Query 131155 TTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGA 131214 || | | || | | |||| | ||| | |||| |||| |||||| || || || Sbjct 293131 TTCACATTTTCAATCGAGTCGGACGGCTCAACTTCGAGCGTAATGGTTTTTCCCGTGAGT 293072 Query 131215 GTTTTTACGAAAATCTGCAT 131234 ||||| |||||||||||||| Sbjct 293071 GTTTTCACGAAAATCTGCAT 293052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010994551040