Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20suis_20[genbank_20GCA_5F000797535.1_202014-12-09] 306 sequences; 63,839,715 total letters Query= NC_008689.1 Length=44857 Score E Sequences producing significant alignments: (Bits) Value seq303 87.8 5e-13 >seq303 Length=1045 Score = 87.8 bits (96), Expect = 5e-13 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 41021 TTAAAGATAGAAATAGCTTTTCTAAAACTGATCATGATGCAACTTTTATGAGAATGAAGG 41080 |||| || ||||| |||| ||| || || ||| | || |||||||| ||||||||||||| Sbjct 883 TTAATGACAGAAACAGCTATTCAAAGACAGATGAAGACGCAACTTTCATGAGAATGAAGG 942 Query 41081 AAGACCATATGAAAAATGGCCAACTTAAGCCAGGATACAAT 41121 ||||||| ||| ||||| || || || ||||| || ||| Sbjct 943 AAGACCACATGCTCAATGGTCAGCTCAAACCAGGCTATAAT 983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143420278844668