Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20suis_20[genbank_20GCA_5F000797535.1_202014-12-09] 306 sequences; 63,839,715 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq24 87.8 1e-12 >seq24 Length=829597 Score = 87.8 bits (96), Expect = 1e-12 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || | ||| | || |||||||| | |||||||||||||||||| || ||||||| Sbjct 295332 TTCCGCCTCGCAAACGAAGCACCAGGTGCAAGGTGCTCTCCTTCTGAATATTGTAGTCCG 295273 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCC 34839 ||| | ||||| |||| |||||||| || || Sbjct 295272 ATAAGGTGCGCCCATCTTCCAGTTGTTTGCC 295242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691585369414