Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_000929.1 Length=36717 Score E Sequences producing significant alignments: (Bits) Value seq1103 91.5 3e-14 >seq1103 Length=13301 Score = 91.5 bits (100), Expect = 3e-14 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 33311 CAACAAGCCGAATCACAAAAGGCCGCATTGCTTTCCGAAGCTGAATCAGTCATCCAGCCG 33370 |||| || |||||||| ||| |||| |||||| ||||||| || || ||||||| |||| Sbjct 2849 CAACTGGCGGAATCACAGAAGACCGCTTTGCTTACCGAAGCGGAGTCTGTCATCCGGCCG 2790 Query 33371 CTGGAACGCGCTGTCAGGCTGAATATGGCGACGGATGA 33408 | || || |||||||||||||| | || |||||||| Sbjct 2789 CCGGGGCGTGCTGTCAGGCTGAACAGGGAAACGGATGA 2752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117367007358888