Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq77 89.7 4e-13 >seq77 Length=169284 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 101698 TACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGAC 101757 ||| || ||||||||||| |||| ||||| ||||| || |||| || | || || Sbjct 43603 TACGTAAATGTGAGCATCGCCTAACGTATGAATAAAGTCGCCAGCTCGTAAACCGGTAAC 43544 Query 101758 ATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 |||||||||||||| || || |||||||| || || ||||||||||| || || Sbjct 43543 ATGAGCAATCATGCGGGTCAACAGAGAATAACTTGCTATGTTAAATGGTACACC 43490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361232902175156