Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq77 89.7 4e-13
>seq77
Length=169284
Score = 89.7 bits (98), Expect = 4e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 101698 TACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGAC 101757
||| || ||||||||||| |||| ||||| ||||| || |||| || | || ||
Sbjct 43603 TACGTAAATGTGAGCATCGCCTAACGTATGAATAAAGTCGCCAGCTCGTAAACCGGTAAC 43544
Query 101758 ATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811
|||||||||||||| || || |||||||| || || ||||||||||| || ||
Sbjct 43543 ATGAGCAATCATGCGGGTCAACAGAGAATAACTTGCTATGTTAAATGGTACACC 43490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361232902175156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |