Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_001416.1
Length=48502
Score E
Sequences producing significant alignments: (Bits) Value
seq1103 6415 0.0
seq1137 96.9 1e-15
>seq1103
Length=13301
Score = 6415 bits (7114), Expect = 0.0
Identities = 4465/5053 (88%), Gaps = 58/5053 (1%)
Strand=Plus/Minus
Query 12965 GATTAACAACGACGGCACGAACGGGCAGATAGGTCCGGCTGCTCTGAAGGCGGTGTATGA 13024
||| || |||||||||||||||||||||||||||||||| || ||||||| ||| |||||
Sbjct 11573 GATCAATAACGACGGCACGAACGGGCAGATAGGTCCGGCAGCACTGAAGGTGGTTTATGA 11514
Query 13025 CATGGCCCGCAAGGGTGCCCGTGATGAAATTCAGACA-CAGATGCGTGATGGTGGCCTGT 13083
| | | || | ||| || || || ||| ||| ||||||||||||| ||
Sbjct 11513 CCTCGGGAAAAAAGCGGCCGCGGACTTTATGCA-ACAGCAGGCCCGTGATGGTGGCCGGT 11455
Query 13084 TCTCCGGAGGTGGACG---ATGAAGACCTTCCGCTGGAAAGTGAAACCCGGTATGGATGT 13140
| |||| || ||| |||| || |||||||| ||| || | |||| ||||
Sbjct 11454 TAAGTGGAGCATACCGGTAATGGAGACGTTTCGCTGGAAGGTGCGCCCGGATATGAATGT 11395
Query 13141 GGCTTCGGTCCCTTCTGTAAGAAAGGTGCGCTTTGGTGATGGCTATTCTCAGCGAGCGCC 13200
|| || | || || ||| | |||||||| ||| ||||| ||||
Sbjct 11394 GGTATCAGAGCCAAAAGTGGTGGCAGTGAAGCTGGGTGATGGTTATGAACAGCGT-CGCC 11336
Query 13201 TGCCGGG-CTGAATGCCAACCTGAAAACGTACAGCGTGACGCTTTCTGTCCCCC---GTG 13256
| |||| |||||| ||| || |||||||||||| | ||| | |||
Sbjct 11335 CGGCGGGACTGAATAATCTGCTGTCGACTTACAGCGTGACGATACGTGTTCGTAAAGGTG 11276
Query 13257 AGGAGGCCACGGTACTGGAGTCGTTTCTGGAAGAGCACGGGGGCTGGAAATCCTTTCTGT 13316
| | |||| | | | | ||||||||| |||||| ||| | |||| ||
Sbjct 11275 AACAC-CCACCTT--TAAAAGCCTTTCTGGAACGGCACGGTGGCGTCCGCGCATTTCAGT 11219
Query 13317 GGACGCCGCCTTATGAGTGGCGGCAGATAAAGGTGACCTGCGCAAAATGGTCGTCGCGGG 13376
||||||| |||||||| ||| | ||| | |||| || ||||||||| | | |
Sbjct 11218 GGACGCCACCTTATGACTGGAAACCGATCAGGGTGGTTTGTCGTAAATGGTCGGCAAGCG 11159
Query 13377 TCAGTATGCTGCGTGTTGAGTTCAGCG-CAGAGTTTGAACAGGTGGTGAACTGATGCAGG 13435
| | | | | || || | | || | || |||||||||||||||||||||||||||
Sbjct 11158 TGGGGGCGTTATGGGT-GACTGTAACGGCCGATTTTGAACAGGTGGTGAACTGATGCAGG 11100
Query 13436 ATATCCGGCAGGAAACACTGAATGAATGCACCCGTGCGGAGCAGTCGGCCAGCGTGGTGC 13495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11099 ATATCCGGCAGGAAACACTGAATGAATGCACCCGTGCGGAGCAGTCGGCCAGCGTGGTGC 11040
Query 13496 TCTGGGAAATCGACCTGACAGAGGTCGGTGGAGAACGTTATTTTTTCTGTAATGAGCAGA 13555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11039 TCTGGGAAATCGACCTGACAGAGGTCGGTGGAGAACGTTATTTTTTCTGTAATGAGCAGA 10980
Query 13556 ACGAAAAAGGTGAGCCGGTCACCTGGCAGGGGCGACAGTATCAGCCGTATCCCATTCAGG 13615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10979 ACGAAAAAGGTGAGCCGGTCACCTGGCAGGGGCGACAGTATCAGCCGTATCCCATTCAGG 10920
Query 13616 GGAGCGGTTTTGAACTGAATGGCAAAGGCACCAGTACGCGCCCCACGCTGACGGTTTCTA 13675
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10919 GGAGTGGTTTTGAACTGAATGGCAAAGGCACCAGTACGCGCCCCACGCTGACGGTTTCTA 10860
Query 13676 ACCTGTACGGTATGGTCACCGGGATGGCGGAAGATATGCAGAGTCTGGTCGGCGGAACGG 13735
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 10859 ACCTGTACGGTATGGTCACCGGGATGGCGGAAGATCTGCAGAGTCTGGTCGGCGGAACGG 10800
Query 13736 TGGTCCGGCGTAAGGTTTACGCCCGTTTTCTGGATGCGGTGAACTTCGTCAACGGAAACA 13795
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 10799 TGGTCCGGCGTAAGGTTTACGCCCGTTTTCTTGATGCGGTGAACTTCGTCAACGGAAACA 10740
Query 13796 GTTACGCCGATCCGGAGCAGGAGGTGATCAGCCGCTGGCGCATTGAGCAGTGCAGCGAAC 13855
| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 10739 GAGACGCCGATCCGGAGCAGGAGGTGATCAGCCGCTGGCGCATCGAGCAGTGCAGCGAAC 10680
Query 13856 TGAGCGCGGTGAGTGCCTCCTTTGTACTGTCCACGCCGACGGAAACGGATGGCGCTGTTT 13915
|||||||||| |||||||| ||||| ||| |||| || ||||| ||||||||||| ||||
Sbjct 10679 TGAGCGCGGTCAGTGCCTCTTTTGTGCTGGCCACACCAACGGAGACGGATGGCGCGGTTT 10620
Query 13916 TTCCGGGACGTATCATGCTGGCCAACACCTGCACCTGGACCTATCGCGGTGACGAGTGCG 13975
| ||||| |||||||||||||| || ||||| | |||||||| || ||| ||||| |
Sbjct 10619 TCCCGGGGCGTATCATGCTGGCGAATACCTGTATGTGGACCTACCGTTCTGATGAGTGTG 10560
Query 13976 GTTATAGCGGTCCGGCTGTCGCGGATGAATATGACCAGCCAACGTCCGATATCACGAAGG 14035
|||| | || ||| || || || || | ||| | |||||| | |||||| |||||
Sbjct 10559 GTTACACGGGCAGGGCAGTGGCTGACGAGTTCGACAAACCAACGACGGATATCCGGAAGG 10500
Query 14036 ATAAATGCAGCAAATGCCTGAGCGGTTGTAAGTTCCGCAATAACGTCGGCAACTTTGGCG 14095
| ||||||||||| || || |||| ||| |||| ||||| || ||| || || ||||
Sbjct 10499 ACAAATGCAGCAAGTGTATGCGCGGGTGTGAGTTGCGCAACAATACCGGTAATTTCGGCG 10440
Query 14096 GCTTCCTTTCCATTAACAAACTTTCGCAGTAAATCCCATGACACAGACAGAATCAGCGAT 14155
| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||||||
Sbjct 10439 GTTTCCTTTCCATCAATAAACTTTCTCAGTAAATCC-ATGACACAGACAGAATCAGCGAT 10381
Query 14156 TCTGGCGCACGCCCGGCGATGTGCGCCAGCGGAGTCGTGCGGCTTCGTGGTAAGCACGCC 14215
||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct 10380 TCTGGCGCACGCCCGGCGATGTGCGCCAGCGGAGTCGTGTGGCTTCGTGGTGAGAACGCC 10321
Query 14216 GGAGGGGGAAAGATATTTCCCCTGCGTGAATATCTCCGGTGAGCCGGAGGCTAT-TTCCG 14274
|||||| || || ||| | ||| ||| ||||||||||||||||||||||| |||||
Sbjct 10320 GGAGGGAGACAGGTATCTTCCCAGCGAGAATATCTCCGGTGAGCCGGAGGAACGGTTCCG 10261
Query 14275 TATGTCGCCGGAAGACTGGCTGCAGGCAGAAATGCAGGGTGAGATTGTGGCGCTGGTCCA 14334
||| | ||||| |||||||||| |||| |||||||||||||||||||||| ||||||||
Sbjct 10260 GATGGCTCCGGAGGACTGGCTGCGGGCACAAATGCAGGGTGAGATTGTGGCACTGGTCCA 10201
Query 14335 CAGCCACCCCGGTGGTCTGCCCTGGCTGAGTGAGGCCGACCGGCGGCTGCAGGTGCAGAG 14394
||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 10200 CAGTCATCCCGGTGGTCTGCCCTGGCTGAGTGAGGCTGACCGGCGGCTGCAGGTGCAGAG 10141
Query 14395 TGATTTGCCGTGGTGGCTGGTCTGCCGGGGGACGATTCATAAGTTCCGCTGTGTGCCGCA 14454
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 10140 TGATTTGCCGTGGTGGCTGGTCTGCCGGGGGGCGATTCATAAGTTCCGCTGTGTGCCGCA 10081
Query 14455 TCTCACCGGGCGGCGCTTTGAGCACGGTGTGACGGACTGTTACACACTGTTCCGGGATGC 14514
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 10080 TCTCACCGGGCGGCGCTTTGAGCACGGGGTGACGGACTGTTACACGCTGTTCCGGGATGC 10021
Query 14515 TTATCATCTGGCGGGGATTGAGATGCCGGACTTTCATCGTGAGGATGACTGGTGGCGTAA 14574
|||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| |
Sbjct 10020 TTATCATCTGGCGGGGATTGAGATGCCGGATTTTCATCGCGGGGATGACTGGTGGCGTCA 9961
Query 14575 CGGCCAGAATCTCTATCTGGATAATCTGGAGGCGACGGGGCTGTATCAGGTGCCGTTGTC 14634
||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 9960 CGGTCAGAATCTCTATCTGGATAATCTGGAGGCCACAGGGCTGTATCAGGTGCCGTTGTC 9901
Query 14635 AGCGGCACAGCCGGGCGATGTGCTGCTGTGCTGTTTTGGTTCATCAGTGCCGAATCACGC 14694
| | ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 9900 ATCAGCACAACCGGGCGATGTGCTGCTGTGCTGTTTTGGTTCATCGGTGCCGAATCATGC 9841
Query 14695 CGCAATTTACTGCGGCGACGGCGAGCTGCTGCACCATATTCCTGAACAACTGAGCAAACG 14754
||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 9840 CGCCATTTACTGCGGCGACGGTGAGCTGCTGCACCATATTCCTGAACAACTGAGTAAACG 9781
Query 14755 AGAGAGGTACACCGACAAATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGCATG 14814
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 9780 AGAGAGGTATACCGACAAATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGAATG 9721
Query 14815 GCGCGCATCTGCCTTTACGGGGATTTACAACGATTTGGTCGCCGCATCGACCTTCGTGTG 14874
|| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 9720 GCACGCATCTGCCTTTACGGGGATTTGCAACGATTTGGCCGCCGCATCGACCTTCGTGTG 9661
Query 14875 AAAACGGGGGCTGAAGCCATCCGGGCACTGGCCACACAGCTCCCGGCGTTTCGTCAGAAA 14934
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 9660 AAAACGGGGGCTGAAGCCATCCGCGCACTGGCCACACAGCTCCCGGCGTTTCGTCAGAAA 9601
Query 14935 CTGAGCGACGGCTGGTATCAGGTACGGATTGCCGGGCGGGACGTCAGCACGT----CCGG 14990
||||| ||||||||||||||||| || ||||||||||| || | || || |||
Sbjct 9600 CTGAGTGACGGCTGGTATCAGGTGCGCATTGCCGGGCGTGATG----CAGGTGAAACCGA 9545
Query 14991 GTTAACGGCGCAGTTACATGAGACTCTGCCTGATGGCGCTGTAATTCATATTGTTCCCAG 15050
|| | || | | ||||| | ||| | |||| || || || || || || || |
Sbjct 9544 ATTGTCTGCCCGTCTTAATGAGCCGCTGGCAAATGGTGCAGTGATCCACATAGTACCGCG 9485
Query 15051 AGTCGCCGGGGCCAAGTCAGGTGGCGTATTCCAGATTGTCCTGGGGGCTGCCGCCATTGC 15110
| | || || || || || || || ||| || |||||||| || | || ||
Sbjct 9484 TCTGGTGGGAGCTAAAAGTGGCGGTGTGTTTCAGGCGGTGCTGGGGGCGGCTGTTATGGC 9425
Query 15111 CGGATCATTCTTTACCGCCGGAGCCACCCTTGCAGCATGGGGGGCAGCCATTGGGGCCGG 15170
| | || || ||| ||| | |||| || ||| ||| |
Sbjct 9424 GGT----TGCTATAT----GGA--------TGCCG-----GGGGTAGGAATTATGGCGAG 9386
Query 15171 TGGTATGACCGGCATCCTGTTTTCTCTCGGTGCCAGTATGGTGCTCGGTGGTGTGGCGCA 15230
| | || |||||||||||||||||||||||| ||| || ||||| || ||
Sbjct 9385 TAATCTG---------CTGTTTTCTCTCGGTGCCAGTATGACGCTTGGCGGTGTTGCACA 9335
Query 15231 GATGCTGGCACCGAAAGCCAGAACTCCCCGTATACAGACAACGGATAACGGTAAGCAGAA 15290
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 9334 GATGCTGGCACCGAAAGCCAGAACTCCCCGTACACAGACAACGGATAACGGTAAGCAGAA 9275
Query 15291 CACCTATTTCTCCTCACTGGATAACATGGTTGCCCAGGGCAATGTTCTGCCTGTTCTGTA 15350
||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 9274 CACGTATTTCTCGTCACTGGATAACATGGTTGCCCAGGGCAATGTTCTGCCCGTTCTGTA 9215
Query 15351 CGGGGAAATGCGCGTGGGGTCACGCGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGG 15410
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 9214 CGGTGAAATGCGCGTGGGGTCACGTGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGG 9155
Query 15411 GGACGGTGGTCAGGTTGTGGTGATTGGTCGCTGATGCAAAATGTTTTATGTGAAACCGCC 15470
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 9154 GGATGGTGGTCAGGTTGTGGTGATTGGTCGCTGATGCAAAATGTTTCATGTGAAACCGCC 9095
Query 15471 TGCGGGCGGTTTTGTCATTTATGGAGCGTGAGGAATGGGTAAAGGAAGCAGTAAGGGGCA 15530
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 9094 TGCGGGCGGTTTTGTCGTTTATGGAGCGTGAGGAATGGGTAAAGGCAGCAGTAAGGGGCA 9035
Query 15531 TACCCCGCGCGAAGCGAAGGACAACCTGAAGTCCACGCAGTTGCTGAGTGTGATCGATGC 15590
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 9034 TACCCCGCGCGAAGCGAAGGACAACCTGAAATCCACGCAGTTGCTGAGTGTGATTGATGC 8975
Query 15591 CATCAGCGAAGGGCCGATTGAAGGTCCGGTGGATGGCTTAAAAAGCGTGCTGCTGAACAG 15650
|||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 8974 CATCAGCGAAGGGCCGGTTGAAGGTCCGGTGGATGGATTAAAAAGCGTGCTGCTGAACGG 8915
Query 15651 TACGCCGGTGCTGGACACTGAGGGGAATACCAACATATCCGGTGTCACGGTGGTGTTCCG 15710
||||||||| ||||||| |||||||| || ||| | |||||||| ||||||||||||||
Sbjct 8914 TACGCCGGTCCTGGACAGCGAGGGGAAGACAAACTTTTCCGGTGTTACGGTGGTGTTCCG 8855
Query 15711 GGCTGGTGAGCAGGAGCAGACTCCGCCGGAGGGATTTGAATCCTCCGGCTCCGAGACGGT 15770
|| || |||||||||||||| ||||||||||| |||||||| |||||||| ||||| ||
Sbjct 8854 CGCCGGCGAGCAGGAGCAGACACCGCCGGAGGGGTTTGAATCTTCCGGCTCAGAGACTGT 8795
Query 15771 GCTGGGTACGGAAGTGAAATATGACACGCCGATCACCCGCACCATTACGTCTGCAAACAT 15830
||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||
Sbjct 8794 GCTGGGTACGGAAGTGAAATACGACACGCCGATCACCCGGACCATCACGTCGGCAAACAT 8735
Query 15831 CGACCGTCTGCGCTTTACCTTCGGTGTACAGGCACTGGTGGAAACCACCTCAAAGGGTGA 15890
|| ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 8734 TGATCGTCTGCGCCTGACCTTCGGTGTGCAGGCACTGGTGGAAACCACCTCAAAGGGGGA 8675
Query 15891 CAGGAATCCGTCGGAAGTCCGCCTGCTGGTTCAGATACAACGTAACGGTGGCTGGGTGAC 15950
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 8674 CCGGAATCCGTCGGAAGTCCGCCTGCTGGTTCAGATACAGCGTAACGGTGGCTGGGTGAC 8615
Query 15951 GGAAAAAGACATCACCATTAAGGGCAAAACCACCTCGCAGTATCTGGCCTCGGTGGTGAT 16010
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 8614 GGAAAAAGACATCACCATTAAGGGCAAAACCACTTCGCAGTATCTGGCCTCGGTGGTGGT 8555
Query 16011 GGGTAACCTGCCGCCGCGCCCGTTTAATATCCGGATGCGCAGGATGACGCCGGACAGCAC 16070
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 8554 GGGTAACCTGCCGCCGCGCCCGTTTAATATCCGGATGCGCAGGATGACACCGGACAGCAC 8495
Query 16071 CACAGACCAGCTGCAGAACAAAACGCTCTGGTCGTCATACACTGAAATCATCGATGTGAA 16130
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 8494 CACAGACCAGCTGCAGAACAAAACGCTCTGGTCGTCGTACACCGAAATCATCGATGTGAA 8435
Query 16131 ACAGTGCTACCCGAACACGGCACTGGTCGGCGTGCAGGTGGACTCGGAGCAGTTCGGCAG 16190
||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| |
Sbjct 8434 ACAGTGCTACCCGAACACGGCGCTGGTCGGCGTGCAGGTGGATTCAGAGCAGTTCGGTAA 8375
Query 16191 CCAGCAGGTGAGCCGTAATTATCATCTGCGCGGGCGTATTCTGCAGGTGCCGTCGAACTA 16250
|||||||||||| || ||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 8374 CCAGCAGGTGAGTCGCAATTATCATCTTCGCGGGCGCATTCTGCAGGTGCCGTCGAACTA 8315
Query 16251 TAACCCGCAGACGCGGCAATACAGCGGTATCTGGGACGGAACGTTTAAACCGGCATACAG 16310
||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct 8314 TAACCCGCAGACGCGGCAATACAGCGGTATCTGGGACGGAACGCTTAAGCCAGCATACAG 8255
Query 16311 CAACAACATGGCCTGGTGTCTGTGGGATATGCTGACCCATCCGCGCTACGGCATGGGGAA 16370
||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct 8254 CAACAACATGGCCTGGTGTCTGTGGGACATGCTCACTCATCCGCGCTACGGCATGGGGAA 8195
Query 16371 ACGTCTTGGTGCGGCGGATGTGGATAAATGGGCGCTGTATGTCATCGGCCAGTACTGCGA 16430
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 8194 ACGTCTTGGTGCGGCAGATGTGGACAAATGGGCGCTGTATGTCATCGGCCAGTACTGCGA 8135
Query 16431 CCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGCGTACCT 16490
|||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct 8134 CCAGTCAGTGCCGGACGGATTTGGCGGCACGGAGCCGCGCATCACCTGTAACGCTTACCT 8075
Query 16491 GACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCGCTGTAT 16550
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 8074 GACCACACAGCGTAAGGCGTGGGATGTTCTCAGTGATTTCTGCTCGGCGATGCGCTGTAT 8015
Query 16551 GCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAAGACGTG 16610
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 8014 GCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAAGGTGTG 7955
Query 16611 GACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTACAGCTT 16670
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 7954 GACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGTTACAGCTT 7895
Query 16671 CAGCGCCCTGAAGGACCGCCATAATGCCGTTGAGGTGAACTGGATTGACCCGAACAACGG 16730
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 7894 CAGCGCCCTGAAGGACCGCCATAATGCCGTTGAGGTGAACTGGATTGATCCGGACAACGG 7835
Query 16731 CTGGGAGACGGCGACAGAGCTTGTTGAAGATACGCAGGCCATTGCCCGTTACGGTCGTAA 16790
|||||||||||||||||||| || || |||||||||||| |||||||||||||||
Sbjct 7834 TCATGAGACGGCGACAGAGCTTGTGGAGGACACGCAGGCCATTCTCCGTTACGGTCGTAA 7775
Query 16791 TGTTACGAAGATGGATGCCTTTGGCTGTACCAGCCGGGGGCAGGCACACCGCGCCGGGCT 16850
|| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 7774 CGTCACGAAGATGGATGCCTTTGGCTGTACCAGCCGGGGACAGGCGCACCGCGCCGGGCT 7715
Query 16851 GTGGCTGATTAAAACAGAACTGCTGGAAACGCAGACCGTGGATTTCAGCGTCGGCGCAGA 16910
|||||||||||||||||||||||||||||||||||||||||| |||||||| || || ||
Sbjct 7714 GTGGCTGATTAAAACAGAACTGCTGGAAACGCAGACCGTGGACTTCAGCGTGGGTGCTGA 7655
Query 16911 AGGGCTTCGCCATGTACCGGGCGATGTTATTGAAATCTGCGATGATGACTATGCCGGTAT 16970
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 7654 AGGGCTTCGCCATGTACCGGGCGATGTCATTGAAATCTGCGATGATGACTATGCCGGTAT 7595
Query 16971 CAGCACCGGTGGTCGTGTGCTGGCGGTGAACAGCCAGACCCGGACGCTGACGCTCGACCG 17030
||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7594 CAGCACCGGCGGGCGCGTGCTGGCGGTGAACAGCCAGACCCGGACGCTGACGCTCGACCG 7535
Query 17031 TGAAATCACGCTGCCATCCTCCGGTACCGCGCTGATAAGCCTGGTTGACGGAAGTGGCAA 17090
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 7534 TGAAATCACGCTGCCATCCTCCGGTACCACGCTGATAAGCCTGGTTGACGGAAGTGGCAA 7475
Query 17091 TCCGGTCAGCGTGGAGGTTCAGTCCGTCACCGACGGCGTGAAGGTAAAAGTGAGCCGTGT 17150
|||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |
Sbjct 7474 TCCGGTCAGCGTGGAGGTCCAGTCCGTCACCGACGGCGTGAAGGTGAAAGTGAGCCGTAT 7415
Query 17151 TCCTGACGGTGTTGCTGAATACAGCGTATGGGAGCTGAAGCTGCCGACGCTGCGCCAGCG 17210
||||||||| ||||| | ||||||||| |||| |||||||||||||||||||| ||||||
Sbjct 7414 TCCTGACGGCGTTGCCGGATACAGCGTGTGGGGGCTGAAGCTGCCGACGCTGCACCAGCG 7355
Query 17211 ACTGTTCCGCTGCGTGAGTATCCGTGAGAACGACGACGGCACGTATGCCATCACCGCCGT 17270
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7354 CCTGTTCCGCTGTGTGAGTATCCGTGAGAACGACGACGGCACGTATGCCATCACCGCCGT 7295
Query 17271 GCAGCATGTGCCGGAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACA 17330
||||||||||||||||||||||||||| |||||||||||||| ||||||||| | || |
Sbjct 7294 GCAGCATGTGCCGGAAAAAGAGGCCATTGTGGATAACGGGGCACACTTTGACAGTGACCG 7235
Query 17331 GAGTGGCACGGTGAATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCAC 17390
| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 7234 GCGCGGCACGGTGAATGGTGTCACGCCGCCAGCAGTGCAGCACCTGACCGCAGAAGTCAT 7175
Query 17391 TGCAGACAGCGGGGAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGG 17450
|||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 7174 CGCAGGCAGCGGGGAATATCAGGTGCTGGCGCGCTGGGACACGCCGAAGGTGGTGAAGGG 7115
Query 17451 CGTGAGTTTCCTGCTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAG 17510
||||| |||||||| || |||||||| ||||||| |||||||||||||||||||||||
Sbjct 7114 GGTGAGCTTCCTGCTTCGCCTGACCGTGGCAGCGGATGACGGCAGTGAGCGGCTGGTCAG 7055
Query 17511 CACGGCCCGGACGACGGAAACCACATACCGCTTCACGCAACTGGCGCTGGGGAACTACAG 17570
||| ||||||||||||||||||||||| || |||||||| || ||| ||||| || |
Sbjct 7054 CACAGCCCGGACGACGGAAACCACATATCGTTTCACGCAGCTTGCGTTGGGGCGTTATAC 6995
Query 17571 GCTGACAGTCCGGGCGGTAAATGCGTGGGGGCAGCAGGGCGATCCGGCGTCGGTATCGTT 17630
|||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 6994 GCTGACAGTCCGGGCGGTAAATGCCCGGGGGCAGCAGGGCGATCCGGTGTCGGTATCGTT 6935
Query 17631 CCGGATTGCCGCACCGGCAGCACC-GTCGAGGATTGAGCTGACGCCGGGCTATTTTCAGA 17689
||||||||| ||||||||||| || ||| | ||||| |||| ||||| ||||||||||
Sbjct 6934 CCGGATTGCGGCACCGGCAGCGCCTGTC-ACTATTGAACTGATACCGGGGTATTTTCAGA 6876
Query 17690 TAACCGCCACGCCGCATCTTGCCGTTTATGACCCGACGGTACAGTTTGAGTTCTGGTTCT 17749
|||| || ||| | || || || |||||||||||||| ||||||||||||||||| |
Sbjct 6875 TAACGGCGGTCCCGAAACTGGCTGTATATGACCCGACGGTGCAGTTTGAGTTCTGGTTTT 6816
Query 17750 CGGAAAAGCAGATTGCGGATATCAGACAGGTTGAAACCAGCACGCGTTATCTTGGTACGG 17809
||||||||| ||||||||||||||| ||||||||||||| | || |||||||| ||||
Sbjct 6815 CGGAAAAGCGGATTGCGGATATCAGGCAGGTTGAAACCACAGCCCGCTATCTTGGCACGG 6756
Query 17810 CGCTGTACTGGATAGCCGCCAGTATCAATATCAAACCGGGCCATGATTATTACTTTTATA 17869
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 6755 CGCTGTACTGGATAGCCGCCAGTATCAATATCAAACCGGGCCATGATTATTATTTTTACG 6696
Query 17870 TCCGCAGTGTGAACACCGTTGGCAAATCGGCATTCGTGGAGGCCGTCGGTCGGGCGAGCG 17929
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 6695 TTCGCAGTGTGAACACCGTTGGCAAATCGGCATTTGTGGAGGCCGTCGGTCGGGCGAGCG 6636
Query 17930 ATGATGCGGAAGGTTACCTGGATTTTTTCAAAGGCAAGATAACCGAATCCCATCTCGGCA 17989
|||||||||||||||| ||| ||||| ||||| ||| | || | ||||||||||
Sbjct 6635 ATGATGCGGAAGGTTATCTGAGTTTTTATAAAGGGTTGATCAATAAAACGCATCTCGGCA 6576
Query 17990 AGGAGCTGCTGGA 18002
||||| || ||||
Sbjct 6575 AGGAGTTG-TGGA 6564
Score = 262 bits (290), Expect = 1e-65
Identities = 236/295 (80%), Gaps = 1/295 (0%)
Strand=Plus/Minus
Query 19458 TGGCGTGGAGTGCAGGTATACAGATTAATCCGGCAGCGTCCGTCGTTGTTGATATTGCTT 19517
|||||||| | || || | ||| |||| ||| | | ||||| | |||| ||||||
Sbjct 5041 TGGCGTGGGGGGCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGACCTTGCTT 4982
Query 19518 ATGAAGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATA 19577
||||||| |||||||||||||||||||| |||||||| |||||||| || ||||||||||
Sbjct 4981 ATGAAGGTTCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATA 4922
Query 19578 AATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTT 19637
| ||||||||||||||||||||||||||||||||||||||| || | || |||| ||||
Sbjct 4921 AGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCTGGTTCAGGCGGGC-TTTT 4863
Query 19638 TGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCG 19697
|||||||||||||||||||||||||||||||| || |||||||| || | || |||||
Sbjct 4862 TGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGATGGGGCGGGTAAACCT 4803
Query 19698 GTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGG 19752
|| || || | ||| | ||| |||||| | | ||| | || || ||||
Sbjct 4802 GTCGTAAATTGTGCGATTGAACTGCGGGCCAGAAGAACCAGTCCGACCGTTGTGG 4748
Score = 255 bits (282), Expect = 2e-63
Identities = 275/364 (76%), Gaps = 0/364 (0%)
Strand=Plus/Minus
Query 18087 CATGTGGGCTGTCAAAATTGAGCAGACCAAAGACGGCAAACATTATGTCGCGGGTATTGG 18146
|||||||||||| || | | |||| || ||||| | |||| | |||||||| ||
Sbjct 6394 CATGTGGGCTGTGAAGCTGCAACAGATGAAGGACGGACGCCTTTATATTGCGGGTATCGG 6335
Query 18147 CCTCAGCATGGAGGACACGGAGGAAGGCAAACTGAGCCAGTTTCTGGTTGCCGCCAATCG 18206
| | || ||| | ||| | ||| | | ||| ||| | ||| | || || | |
Sbjct 6334 TGCCGGTATTGAGAATACGCCAGCAGGAATGCAGAGTCAGGTGCTGCTGGCGGCAGACAG 6275
Query 18207 TATCGCATTTATTGACCCGGCAAACGGGAATGAAACGCCGATGTTTGTGGCGCAGGGCAA 18266
|| || | ||| | || || || || || || |||||||||||| | |||||| |
Sbjct 6274 GATTGCGATGATTAATCCTGCGAATGGCAACACAAAGCCGATGTTTGTTGGTCAGGGCGA 6215
Query 18267 CCAGATATTCATGAACGACGTGTTCCTGAAGCGCCTGACGGCCCCCACCATTACCAGCGG 18326
||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct 6214 TCAGATATTCATGAACGACGTGTTCCTGAAACGCCTGACGGCTCCGACCATTACCAGCGG 6155
Query 18327 CGGCAATCCTCCGGCCTTTTCCCTGACACCGGACGGAAAGCTGACCGCTAAAAATGCGGA 18386
||| ||||||||||| |||||||||||||| | |||| |||||| || |||||||| ||
Sbjct 6154 CGGTAATCCTCCGGCATTTTCCCTGACACCTGGCGGACGGCTGACGGCGAAAAATGCCGA 6095
Query 18387 TATCAGTGGCAGTGTGAATGCGAACTCCGGGACGCTCAGTAATGTGACGATAGCTGAAAA 18446
|||||| || | ||||| ||||||||||||||||||| || || ||||| | | ||
Sbjct 6094 TATCAGCGGTAACGTGAACGCGAACTCCGGGACGCTCAACAACGTCACGATTAATAAGAA 6035
Query 18447 CTGT 18450
||||
Sbjct 6034 CTGT 6031
>seq1137
Length=12692
Score = 96.9 bits (106), Expect = 1e-15
Identities = 153/213 (72%), Gaps = 11/213 (5%)
Strand=Plus/Minus
Query 47322 ATATTATCTGTGGCTAGATAGTAAATATAATGTG--AGACGTTGTGACGTTTTAGTTCAG 47379
|| ||||| || || ||||| ||||| ||||||| | ||| |||| |||||| ||| |
Sbjct 6208 ATGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACG--GTGATGTTTTAATTCTG 6151
Query 47380 AATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGG 47439
|||||||| | ||| | ||||||| |||||| || || || | || |||||
Sbjct 6150 AATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAA 6091
Query 47440 CAACCTGAGCCATTGG--TAA-AACCTTCCATGTGA--TACGAGGGCGCGTAGTTTGCAT 47494
| |||||| |||| | ||| ||||| | ||| | | ||| ||||||| ||||
Sbjct 6090 CGACCTGATCCATCAGGATAATAACCT--CTTGTTAGTTGTGAGACTGCGTAGTGTGCAC 6033
Query 47495 TATCGTTTTTATCGTTTCAATCTGGTCTGACCT 47527
|||| ||||| | |||||||||||||| |||
Sbjct 6032 GATCGGTTTTACCACTTCAATCTGGTCTGTCCT 6000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 155077146177408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |