Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq1103 6415 0.0 seq1137 96.9 1e-15 >seq1103 Length=13301 Score = 6415 bits (7114), Expect = 0.0 Identities = 4465/5053 (88%), Gaps = 58/5053 (1%) Strand=Plus/Minus Query 12965 GATTAACAACGACGGCACGAACGGGCAGATAGGTCCGGCTGCTCTGAAGGCGGTGTATGA 13024 ||| || |||||||||||||||||||||||||||||||| || ||||||| ||| ||||| Sbjct 11573 GATCAATAACGACGGCACGAACGGGCAGATAGGTCCGGCAGCACTGAAGGTGGTTTATGA 11514 Query 13025 CATGGCCCGCAAGGGTGCCCGTGATGAAATTCAGACA-CAGATGCGTGATGGTGGCCTGT 13083 | | | || | ||| || || || ||| ||| ||||||||||||| || Sbjct 11513 CCTCGGGAAAAAAGCGGCCGCGGACTTTATGCA-ACAGCAGGCCCGTGATGGTGGCCGGT 11455 Query 13084 TCTCCGGAGGTGGACG---ATGAAGACCTTCCGCTGGAAAGTGAAACCCGGTATGGATGT 13140 | |||| || ||| |||| || |||||||| ||| || | |||| |||| Sbjct 11454 TAAGTGGAGCATACCGGTAATGGAGACGTTTCGCTGGAAGGTGCGCCCGGATATGAATGT 11395 Query 13141 GGCTTCGGTCCCTTCTGTAAGAAAGGTGCGCTTTGGTGATGGCTATTCTCAGCGAGCGCC 13200 || || | || || ||| | |||||||| ||| ||||| |||| Sbjct 11394 GGTATCAGAGCCAAAAGTGGTGGCAGTGAAGCTGGGTGATGGTTATGAACAGCGT-CGCC 11336 Query 13201 TGCCGGG-CTGAATGCCAACCTGAAAACGTACAGCGTGACGCTTTCTGTCCCCC---GTG 13256 | |||| |||||| ||| || |||||||||||| | ||| | ||| Sbjct 11335 CGGCGGGACTGAATAATCTGCTGTCGACTTACAGCGTGACGATACGTGTTCGTAAAGGTG 11276 Query 13257 AGGAGGCCACGGTACTGGAGTCGTTTCTGGAAGAGCACGGGGGCTGGAAATCCTTTCTGT 13316 | | |||| | | | | ||||||||| |||||| ||| | |||| || Sbjct 11275 AACAC-CCACCTT--TAAAAGCCTTTCTGGAACGGCACGGTGGCGTCCGCGCATTTCAGT 11219 Query 13317 GGACGCCGCCTTATGAGTGGCGGCAGATAAAGGTGACCTGCGCAAAATGGTCGTCGCGGG 13376 ||||||| |||||||| ||| | ||| | |||| || ||||||||| | | | Sbjct 11218 GGACGCCACCTTATGACTGGAAACCGATCAGGGTGGTTTGTCGTAAATGGTCGGCAAGCG 11159 Query 13377 TCAGTATGCTGCGTGTTGAGTTCAGCG-CAGAGTTTGAACAGGTGGTGAACTGATGCAGG 13435 | | | | | || || | | || | || ||||||||||||||||||||||||||| Sbjct 11158 TGGGGGCGTTATGGGT-GACTGTAACGGCCGATTTTGAACAGGTGGTGAACTGATGCAGG 11100 Query 13436 ATATCCGGCAGGAAACACTGAATGAATGCACCCGTGCGGAGCAGTCGGCCAGCGTGGTGC 13495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11099 ATATCCGGCAGGAAACACTGAATGAATGCACCCGTGCGGAGCAGTCGGCCAGCGTGGTGC 11040 Query 13496 TCTGGGAAATCGACCTGACAGAGGTCGGTGGAGAACGTTATTTTTTCTGTAATGAGCAGA 13555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11039 TCTGGGAAATCGACCTGACAGAGGTCGGTGGAGAACGTTATTTTTTCTGTAATGAGCAGA 10980 Query 13556 ACGAAAAAGGTGAGCCGGTCACCTGGCAGGGGCGACAGTATCAGCCGTATCCCATTCAGG 13615 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10979 ACGAAAAAGGTGAGCCGGTCACCTGGCAGGGGCGACAGTATCAGCCGTATCCCATTCAGG 10920 Query 13616 GGAGCGGTTTTGAACTGAATGGCAAAGGCACCAGTACGCGCCCCACGCTGACGGTTTCTA 13675 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10919 GGAGTGGTTTTGAACTGAATGGCAAAGGCACCAGTACGCGCCCCACGCTGACGGTTTCTA 10860 Query 13676 ACCTGTACGGTATGGTCACCGGGATGGCGGAAGATATGCAGAGTCTGGTCGGCGGAACGG 13735 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 10859 ACCTGTACGGTATGGTCACCGGGATGGCGGAAGATCTGCAGAGTCTGGTCGGCGGAACGG 10800 Query 13736 TGGTCCGGCGTAAGGTTTACGCCCGTTTTCTGGATGCGGTGAACTTCGTCAACGGAAACA 13795 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 10799 TGGTCCGGCGTAAGGTTTACGCCCGTTTTCTTGATGCGGTGAACTTCGTCAACGGAAACA 10740 Query 13796 GTTACGCCGATCCGGAGCAGGAGGTGATCAGCCGCTGGCGCATTGAGCAGTGCAGCGAAC 13855 | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 10739 GAGACGCCGATCCGGAGCAGGAGGTGATCAGCCGCTGGCGCATCGAGCAGTGCAGCGAAC 10680 Query 13856 TGAGCGCGGTGAGTGCCTCCTTTGTACTGTCCACGCCGACGGAAACGGATGGCGCTGTTT 13915 |||||||||| |||||||| ||||| ||| |||| || ||||| ||||||||||| |||| Sbjct 10679 TGAGCGCGGTCAGTGCCTCTTTTGTGCTGGCCACACCAACGGAGACGGATGGCGCGGTTT 10620 Query 13916 TTCCGGGACGTATCATGCTGGCCAACACCTGCACCTGGACCTATCGCGGTGACGAGTGCG 13975 | ||||| |||||||||||||| || ||||| | |||||||| || ||| ||||| | Sbjct 10619 TCCCGGGGCGTATCATGCTGGCGAATACCTGTATGTGGACCTACCGTTCTGATGAGTGTG 10560 Query 13976 GTTATAGCGGTCCGGCTGTCGCGGATGAATATGACCAGCCAACGTCCGATATCACGAAGG 14035 |||| | || ||| || || || || | ||| | |||||| | |||||| ||||| Sbjct 10559 GTTACACGGGCAGGGCAGTGGCTGACGAGTTCGACAAACCAACGACGGATATCCGGAAGG 10500 Query 14036 ATAAATGCAGCAAATGCCTGAGCGGTTGTAAGTTCCGCAATAACGTCGGCAACTTTGGCG 14095 | ||||||||||| || || |||| ||| |||| ||||| || ||| || || |||| Sbjct 10499 ACAAATGCAGCAAGTGTATGCGCGGGTGTGAGTTGCGCAACAATACCGGTAATTTCGGCG 10440 Query 14096 GCTTCCTTTCCATTAACAAACTTTCGCAGTAAATCCCATGACACAGACAGAATCAGCGAT 14155 | ||||||||||| || |||||||| |||||||||| ||||||||||||||||||||||| Sbjct 10439 GTTTCCTTTCCATCAATAAACTTTCTCAGTAAATCC-ATGACACAGACAGAATCAGCGAT 10381 Query 14156 TCTGGCGCACGCCCGGCGATGTGCGCCAGCGGAGTCGTGCGGCTTCGTGGTAAGCACGCC 14215 ||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| Sbjct 10380 TCTGGCGCACGCCCGGCGATGTGCGCCAGCGGAGTCGTGTGGCTTCGTGGTGAGAACGCC 10321 Query 14216 GGAGGGGGAAAGATATTTCCCCTGCGTGAATATCTCCGGTGAGCCGGAGGCTAT-TTCCG 14274 |||||| || || ||| | ||| ||| ||||||||||||||||||||||| ||||| Sbjct 10320 GGAGGGAGACAGGTATCTTCCCAGCGAGAATATCTCCGGTGAGCCGGAGGAACGGTTCCG 10261 Query 14275 TATGTCGCCGGAAGACTGGCTGCAGGCAGAAATGCAGGGTGAGATTGTGGCGCTGGTCCA 14334 ||| | ||||| |||||||||| |||| |||||||||||||||||||||| |||||||| Sbjct 10260 GATGGCTCCGGAGGACTGGCTGCGGGCACAAATGCAGGGTGAGATTGTGGCACTGGTCCA 10201 Query 14335 CAGCCACCCCGGTGGTCTGCCCTGGCTGAGTGAGGCCGACCGGCGGCTGCAGGTGCAGAG 14394 ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 10200 CAGTCATCCCGGTGGTCTGCCCTGGCTGAGTGAGGCTGACCGGCGGCTGCAGGTGCAGAG 10141 Query 14395 TGATTTGCCGTGGTGGCTGGTCTGCCGGGGGACGATTCATAAGTTCCGCTGTGTGCCGCA 14454 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 10140 TGATTTGCCGTGGTGGCTGGTCTGCCGGGGGGCGATTCATAAGTTCCGCTGTGTGCCGCA 10081 Query 14455 TCTCACCGGGCGGCGCTTTGAGCACGGTGTGACGGACTGTTACACACTGTTCCGGGATGC 14514 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 10080 TCTCACCGGGCGGCGCTTTGAGCACGGGGTGACGGACTGTTACACGCTGTTCCGGGATGC 10021 Query 14515 TTATCATCTGGCGGGGATTGAGATGCCGGACTTTCATCGTGAGGATGACTGGTGGCGTAA 14574 |||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| | Sbjct 10020 TTATCATCTGGCGGGGATTGAGATGCCGGATTTTCATCGCGGGGATGACTGGTGGCGTCA 9961 Query 14575 CGGCCAGAATCTCTATCTGGATAATCTGGAGGCGACGGGGCTGTATCAGGTGCCGTTGTC 14634 ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 9960 CGGTCAGAATCTCTATCTGGATAATCTGGAGGCCACAGGGCTGTATCAGGTGCCGTTGTC 9901 Query 14635 AGCGGCACAGCCGGGCGATGTGCTGCTGTGCTGTTTTGGTTCATCAGTGCCGAATCACGC 14694 | | ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 9900 ATCAGCACAACCGGGCGATGTGCTGCTGTGCTGTTTTGGTTCATCGGTGCCGAATCATGC 9841 Query 14695 CGCAATTTACTGCGGCGACGGCGAGCTGCTGCACCATATTCCTGAACAACTGAGCAAACG 14754 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 9840 CGCCATTTACTGCGGCGACGGTGAGCTGCTGCACCATATTCCTGAACAACTGAGTAAACG 9781 Query 14755 AGAGAGGTACACCGACAAATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGCATG 14814 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 9780 AGAGAGGTATACCGACAAATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGAATG 9721 Query 14815 GCGCGCATCTGCCTTTACGGGGATTTACAACGATTTGGTCGCCGCATCGACCTTCGTGTG 14874 || ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 9720 GCACGCATCTGCCTTTACGGGGATTTGCAACGATTTGGCCGCCGCATCGACCTTCGTGTG 9661 Query 14875 AAAACGGGGGCTGAAGCCATCCGGGCACTGGCCACACAGCTCCCGGCGTTTCGTCAGAAA 14934 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 9660 AAAACGGGGGCTGAAGCCATCCGCGCACTGGCCACACAGCTCCCGGCGTTTCGTCAGAAA 9601 Query 14935 CTGAGCGACGGCTGGTATCAGGTACGGATTGCCGGGCGGGACGTCAGCACGT----CCGG 14990 ||||| ||||||||||||||||| || ||||||||||| || | || || ||| Sbjct 9600 CTGAGTGACGGCTGGTATCAGGTGCGCATTGCCGGGCGTGATG----CAGGTGAAACCGA 9545 Query 14991 GTTAACGGCGCAGTTACATGAGACTCTGCCTGATGGCGCTGTAATTCATATTGTTCCCAG 15050 || | || | | ||||| | ||| | |||| || || || || || || || | Sbjct 9544 ATTGTCTGCCCGTCTTAATGAGCCGCTGGCAAATGGTGCAGTGATCCACATAGTACCGCG 9485 Query 15051 AGTCGCCGGGGCCAAGTCAGGTGGCGTATTCCAGATTGTCCTGGGGGCTGCCGCCATTGC 15110 | | || || || || || || || ||| || |||||||| || | || || Sbjct 9484 TCTGGTGGGAGCTAAAAGTGGCGGTGTGTTTCAGGCGGTGCTGGGGGCGGCTGTTATGGC 9425 Query 15111 CGGATCATTCTTTACCGCCGGAGCCACCCTTGCAGCATGGGGGGCAGCCATTGGGGCCGG 15170 | | || || ||| ||| | |||| || ||| ||| | Sbjct 9424 GGT----TGCTATAT----GGA--------TGCCG-----GGGGTAGGAATTATGGCGAG 9386 Query 15171 TGGTATGACCGGCATCCTGTTTTCTCTCGGTGCCAGTATGGTGCTCGGTGGTGTGGCGCA 15230 | | || |||||||||||||||||||||||| ||| || ||||| || || Sbjct 9385 TAATCTG---------CTGTTTTCTCTCGGTGCCAGTATGACGCTTGGCGGTGTTGCACA 9335 Query 15231 GATGCTGGCACCGAAAGCCAGAACTCCCCGTATACAGACAACGGATAACGGTAAGCAGAA 15290 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 9334 GATGCTGGCACCGAAAGCCAGAACTCCCCGTACACAGACAACGGATAACGGTAAGCAGAA 9275 Query 15291 CACCTATTTCTCCTCACTGGATAACATGGTTGCCCAGGGCAATGTTCTGCCTGTTCTGTA 15350 ||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 9274 CACGTATTTCTCGTCACTGGATAACATGGTTGCCCAGGGCAATGTTCTGCCCGTTCTGTA 9215 Query 15351 CGGGGAAATGCGCGTGGGGTCACGCGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGG 15410 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 9214 CGGTGAAATGCGCGTGGGGTCACGTGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGG 9155 Query 15411 GGACGGTGGTCAGGTTGTGGTGATTGGTCGCTGATGCAAAATGTTTTATGTGAAACCGCC 15470 ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 9154 GGATGGTGGTCAGGTTGTGGTGATTGGTCGCTGATGCAAAATGTTTCATGTGAAACCGCC 9095 Query 15471 TGCGGGCGGTTTTGTCATTTATGGAGCGTGAGGAATGGGTAAAGGAAGCAGTAAGGGGCA 15530 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct 9094 TGCGGGCGGTTTTGTCGTTTATGGAGCGTGAGGAATGGGTAAAGGCAGCAGTAAGGGGCA 9035 Query 15531 TACCCCGCGCGAAGCGAAGGACAACCTGAAGTCCACGCAGTTGCTGAGTGTGATCGATGC 15590 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 9034 TACCCCGCGCGAAGCGAAGGACAACCTGAAATCCACGCAGTTGCTGAGTGTGATTGATGC 8975 Query 15591 CATCAGCGAAGGGCCGATTGAAGGTCCGGTGGATGGCTTAAAAAGCGTGCTGCTGAACAG 15650 |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | Sbjct 8974 CATCAGCGAAGGGCCGGTTGAAGGTCCGGTGGATGGATTAAAAAGCGTGCTGCTGAACGG 8915 Query 15651 TACGCCGGTGCTGGACACTGAGGGGAATACCAACATATCCGGTGTCACGGTGGTGTTCCG 15710 ||||||||| ||||||| |||||||| || ||| | |||||||| |||||||||||||| Sbjct 8914 TACGCCGGTCCTGGACAGCGAGGGGAAGACAAACTTTTCCGGTGTTACGGTGGTGTTCCG 8855 Query 15711 GGCTGGTGAGCAGGAGCAGACTCCGCCGGAGGGATTTGAATCCTCCGGCTCCGAGACGGT 15770 || || |||||||||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct 8854 CGCCGGCGAGCAGGAGCAGACACCGCCGGAGGGGTTTGAATCTTCCGGCTCAGAGACTGT 8795 Query 15771 GCTGGGTACGGAAGTGAAATATGACACGCCGATCACCCGCACCATTACGTCTGCAAACAT 15830 ||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||| Sbjct 8794 GCTGGGTACGGAAGTGAAATACGACACGCCGATCACCCGGACCATCACGTCGGCAAACAT 8735 Query 15831 CGACCGTCTGCGCTTTACCTTCGGTGTACAGGCACTGGTGGAAACCACCTCAAAGGGTGA 15890 || ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| || Sbjct 8734 TGATCGTCTGCGCCTGACCTTCGGTGTGCAGGCACTGGTGGAAACCACCTCAAAGGGGGA 8675 Query 15891 CAGGAATCCGTCGGAAGTCCGCCTGCTGGTTCAGATACAACGTAACGGTGGCTGGGTGAC 15950 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 8674 CCGGAATCCGTCGGAAGTCCGCCTGCTGGTTCAGATACAGCGTAACGGTGGCTGGGTGAC 8615 Query 15951 GGAAAAAGACATCACCATTAAGGGCAAAACCACCTCGCAGTATCTGGCCTCGGTGGTGAT 16010 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 8614 GGAAAAAGACATCACCATTAAGGGCAAAACCACTTCGCAGTATCTGGCCTCGGTGGTGGT 8555 Query 16011 GGGTAACCTGCCGCCGCGCCCGTTTAATATCCGGATGCGCAGGATGACGCCGGACAGCAC 16070 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 8554 GGGTAACCTGCCGCCGCGCCCGTTTAATATCCGGATGCGCAGGATGACACCGGACAGCAC 8495 Query 16071 CACAGACCAGCTGCAGAACAAAACGCTCTGGTCGTCATACACTGAAATCATCGATGTGAA 16130 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 8494 CACAGACCAGCTGCAGAACAAAACGCTCTGGTCGTCGTACACCGAAATCATCGATGTGAA 8435 Query 16131 ACAGTGCTACCCGAACACGGCACTGGTCGGCGTGCAGGTGGACTCGGAGCAGTTCGGCAG 16190 ||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| | Sbjct 8434 ACAGTGCTACCCGAACACGGCGCTGGTCGGCGTGCAGGTGGATTCAGAGCAGTTCGGTAA 8375 Query 16191 CCAGCAGGTGAGCCGTAATTATCATCTGCGCGGGCGTATTCTGCAGGTGCCGTCGAACTA 16250 |||||||||||| || ||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 8374 CCAGCAGGTGAGTCGCAATTATCATCTTCGCGGGCGCATTCTGCAGGTGCCGTCGAACTA 8315 Query 16251 TAACCCGCAGACGCGGCAATACAGCGGTATCTGGGACGGAACGTTTAAACCGGCATACAG 16310 ||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||| Sbjct 8314 TAACCCGCAGACGCGGCAATACAGCGGTATCTGGGACGGAACGCTTAAGCCAGCATACAG 8255 Query 16311 CAACAACATGGCCTGGTGTCTGTGGGATATGCTGACCCATCCGCGCTACGGCATGGGGAA 16370 ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct 8254 CAACAACATGGCCTGGTGTCTGTGGGACATGCTCACTCATCCGCGCTACGGCATGGGGAA 8195 Query 16371 ACGTCTTGGTGCGGCGGATGTGGATAAATGGGCGCTGTATGTCATCGGCCAGTACTGCGA 16430 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 8194 ACGTCTTGGTGCGGCAGATGTGGACAAATGGGCGCTGTATGTCATCGGCCAGTACTGCGA 8135 Query 16431 CCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGCGTACCT 16490 |||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct 8134 CCAGTCAGTGCCGGACGGATTTGGCGGCACGGAGCCGCGCATCACCTGTAACGCTTACCT 8075 Query 16491 GACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCGCTGTAT 16550 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 8074 GACCACACAGCGTAAGGCGTGGGATGTTCTCAGTGATTTCTGCTCGGCGATGCGCTGTAT 8015 Query 16551 GCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAAGACGTG 16610 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 8014 GCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAAGGTGTG 7955 Query 16611 GACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTACAGCTT 16670 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 7954 GACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGTTACAGCTT 7895 Query 16671 CAGCGCCCTGAAGGACCGCCATAATGCCGTTGAGGTGAACTGGATTGACCCGAACAACGG 16730 |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct 7894 CAGCGCCCTGAAGGACCGCCATAATGCCGTTGAGGTGAACTGGATTGATCCGGACAACGG 7835 Query 16731 CTGGGAGACGGCGACAGAGCTTGTTGAAGATACGCAGGCCATTGCCCGTTACGGTCGTAA 16790 |||||||||||||||||||| || || |||||||||||| ||||||||||||||| Sbjct 7834 TCATGAGACGGCGACAGAGCTTGTGGAGGACACGCAGGCCATTCTCCGTTACGGTCGTAA 7775 Query 16791 TGTTACGAAGATGGATGCCTTTGGCTGTACCAGCCGGGGGCAGGCACACCGCGCCGGGCT 16850 || ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 7774 CGTCACGAAGATGGATGCCTTTGGCTGTACCAGCCGGGGACAGGCGCACCGCGCCGGGCT 7715 Query 16851 GTGGCTGATTAAAACAGAACTGCTGGAAACGCAGACCGTGGATTTCAGCGTCGGCGCAGA 16910 |||||||||||||||||||||||||||||||||||||||||| |||||||| || || || Sbjct 7714 GTGGCTGATTAAAACAGAACTGCTGGAAACGCAGACCGTGGACTTCAGCGTGGGTGCTGA 7655 Query 16911 AGGGCTTCGCCATGTACCGGGCGATGTTATTGAAATCTGCGATGATGACTATGCCGGTAT 16970 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 7654 AGGGCTTCGCCATGTACCGGGCGATGTCATTGAAATCTGCGATGATGACTATGCCGGTAT 7595 Query 16971 CAGCACCGGTGGTCGTGTGCTGGCGGTGAACAGCCAGACCCGGACGCTGACGCTCGACCG 17030 ||||||||| || || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 7594 CAGCACCGGCGGGCGCGTGCTGGCGGTGAACAGCCAGACCCGGACGCTGACGCTCGACCG 7535 Query 17031 TGAAATCACGCTGCCATCCTCCGGTACCGCGCTGATAAGCCTGGTTGACGGAAGTGGCAA 17090 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 7534 TGAAATCACGCTGCCATCCTCCGGTACCACGCTGATAAGCCTGGTTGACGGAAGTGGCAA 7475 Query 17091 TCCGGTCAGCGTGGAGGTTCAGTCCGTCACCGACGGCGTGAAGGTAAAAGTGAGCCGTGT 17150 |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| | Sbjct 7474 TCCGGTCAGCGTGGAGGTCCAGTCCGTCACCGACGGCGTGAAGGTGAAAGTGAGCCGTAT 7415 Query 17151 TCCTGACGGTGTTGCTGAATACAGCGTATGGGAGCTGAAGCTGCCGACGCTGCGCCAGCG 17210 ||||||||| ||||| | ||||||||| |||| |||||||||||||||||||| |||||| Sbjct 7414 TCCTGACGGCGTTGCCGGATACAGCGTGTGGGGGCTGAAGCTGCCGACGCTGCACCAGCG 7355 Query 17211 ACTGTTCCGCTGCGTGAGTATCCGTGAGAACGACGACGGCACGTATGCCATCACCGCCGT 17270 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7354 CCTGTTCCGCTGTGTGAGTATCCGTGAGAACGACGACGGCACGTATGCCATCACCGCCGT 7295 Query 17271 GCAGCATGTGCCGGAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACA 17330 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| | || | Sbjct 7294 GCAGCATGTGCCGGAAAAAGAGGCCATTGTGGATAACGGGGCACACTTTGACAGTGACCG 7235 Query 17331 GAGTGGCACGGTGAATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCAC 17390 | | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 7234 GCGCGGCACGGTGAATGGTGTCACGCCGCCAGCAGTGCAGCACCTGACCGCAGAAGTCAT 7175 Query 17391 TGCAGACAGCGGGGAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGG 17450 |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 7174 CGCAGGCAGCGGGGAATATCAGGTGCTGGCGCGCTGGGACACGCCGAAGGTGGTGAAGGG 7115 Query 17451 CGTGAGTTTCCTGCTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAG 17510 ||||| |||||||| || |||||||| ||||||| ||||||||||||||||||||||| Sbjct 7114 GGTGAGCTTCCTGCTTCGCCTGACCGTGGCAGCGGATGACGGCAGTGAGCGGCTGGTCAG 7055 Query 17511 CACGGCCCGGACGACGGAAACCACATACCGCTTCACGCAACTGGCGCTGGGGAACTACAG 17570 ||| ||||||||||||||||||||||| || |||||||| || ||| ||||| || | Sbjct 7054 CACAGCCCGGACGACGGAAACCACATATCGTTTCACGCAGCTTGCGTTGGGGCGTTATAC 6995 Query 17571 GCTGACAGTCCGGGCGGTAAATGCGTGGGGGCAGCAGGGCGATCCGGCGTCGGTATCGTT 17630 |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 6994 GCTGACAGTCCGGGCGGTAAATGCCCGGGGGCAGCAGGGCGATCCGGTGTCGGTATCGTT 6935 Query 17631 CCGGATTGCCGCACCGGCAGCACC-GTCGAGGATTGAGCTGACGCCGGGCTATTTTCAGA 17689 ||||||||| ||||||||||| || ||| | ||||| |||| ||||| |||||||||| Sbjct 6934 CCGGATTGCGGCACCGGCAGCGCCTGTC-ACTATTGAACTGATACCGGGGTATTTTCAGA 6876 Query 17690 TAACCGCCACGCCGCATCTTGCCGTTTATGACCCGACGGTACAGTTTGAGTTCTGGTTCT 17749 |||| || ||| | || || || |||||||||||||| ||||||||||||||||| | Sbjct 6875 TAACGGCGGTCCCGAAACTGGCTGTATATGACCCGACGGTGCAGTTTGAGTTCTGGTTTT 6816 Query 17750 CGGAAAAGCAGATTGCGGATATCAGACAGGTTGAAACCAGCACGCGTTATCTTGGTACGG 17809 ||||||||| ||||||||||||||| ||||||||||||| | || |||||||| |||| Sbjct 6815 CGGAAAAGCGGATTGCGGATATCAGGCAGGTTGAAACCACAGCCCGCTATCTTGGCACGG 6756 Query 17810 CGCTGTACTGGATAGCCGCCAGTATCAATATCAAACCGGGCCATGATTATTACTTTTATA 17869 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 6755 CGCTGTACTGGATAGCCGCCAGTATCAATATCAAACCGGGCCATGATTATTATTTTTACG 6696 Query 17870 TCCGCAGTGTGAACACCGTTGGCAAATCGGCATTCGTGGAGGCCGTCGGTCGGGCGAGCG 17929 | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 6695 TTCGCAGTGTGAACACCGTTGGCAAATCGGCATTTGTGGAGGCCGTCGGTCGGGCGAGCG 6636 Query 17930 ATGATGCGGAAGGTTACCTGGATTTTTTCAAAGGCAAGATAACCGAATCCCATCTCGGCA 17989 |||||||||||||||| ||| ||||| ||||| ||| | || | |||||||||| Sbjct 6635 ATGATGCGGAAGGTTATCTGAGTTTTTATAAAGGGTTGATCAATAAAACGCATCTCGGCA 6576 Query 17990 AGGAGCTGCTGGA 18002 ||||| || |||| Sbjct 6575 AGGAGTTG-TGGA 6564 Score = 262 bits (290), Expect = 1e-65 Identities = 236/295 (80%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 19458 TGGCGTGGAGTGCAGGTATACAGATTAATCCGGCAGCGTCCGTCGTTGTTGATATTGCTT 19517 |||||||| | || || | ||| |||| ||| | | ||||| | |||| |||||| Sbjct 5041 TGGCGTGGGGGGCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGACCTTGCTT 4982 Query 19518 ATGAAGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATA 19577 ||||||| |||||||||||||||||||| |||||||| |||||||| || |||||||||| Sbjct 4981 ATGAAGGTTCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATA 4922 Query 19578 AATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTT 19637 | ||||||||||||||||||||||||||||||||||||||| || | || |||| |||| Sbjct 4921 AGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCTGGTTCAGGCGGGC-TTTT 4863 Query 19638 TGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCG 19697 |||||||||||||||||||||||||||||||| || |||||||| || | || ||||| Sbjct 4862 TGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGATGGGGCGGGTAAACCT 4803 Query 19698 GTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGG 19752 || || || | ||| | ||| |||||| | | ||| | || || |||| Sbjct 4802 GTCGTAAATTGTGCGATTGAACTGCGGGCCAGAAGAACCAGTCCGACCGTTGTGG 4748 Score = 255 bits (282), Expect = 2e-63 Identities = 275/364 (76%), Gaps = 0/364 (0%) Strand=Plus/Minus Query 18087 CATGTGGGCTGTCAAAATTGAGCAGACCAAAGACGGCAAACATTATGTCGCGGGTATTGG 18146 |||||||||||| || | | |||| || ||||| | |||| | |||||||| || Sbjct 6394 CATGTGGGCTGTGAAGCTGCAACAGATGAAGGACGGACGCCTTTATATTGCGGGTATCGG 6335 Query 18147 CCTCAGCATGGAGGACACGGAGGAAGGCAAACTGAGCCAGTTTCTGGTTGCCGCCAATCG 18206 | | || ||| | ||| | ||| | | ||| ||| | ||| | || || | | Sbjct 6334 TGCCGGTATTGAGAATACGCCAGCAGGAATGCAGAGTCAGGTGCTGCTGGCGGCAGACAG 6275 Query 18207 TATCGCATTTATTGACCCGGCAAACGGGAATGAAACGCCGATGTTTGTGGCGCAGGGCAA 18266 || || | ||| | || || || || || || |||||||||||| | |||||| | Sbjct 6274 GATTGCGATGATTAATCCTGCGAATGGCAACACAAAGCCGATGTTTGTTGGTCAGGGCGA 6215 Query 18267 CCAGATATTCATGAACGACGTGTTCCTGAAGCGCCTGACGGCCCCCACCATTACCAGCGG 18326 ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| Sbjct 6214 TCAGATATTCATGAACGACGTGTTCCTGAAACGCCTGACGGCTCCGACCATTACCAGCGG 6155 Query 18327 CGGCAATCCTCCGGCCTTTTCCCTGACACCGGACGGAAAGCTGACCGCTAAAAATGCGGA 18386 ||| ||||||||||| |||||||||||||| | |||| |||||| || |||||||| || Sbjct 6154 CGGTAATCCTCCGGCATTTTCCCTGACACCTGGCGGACGGCTGACGGCGAAAAATGCCGA 6095 Query 18387 TATCAGTGGCAGTGTGAATGCGAACTCCGGGACGCTCAGTAATGTGACGATAGCTGAAAA 18446 |||||| || | ||||| ||||||||||||||||||| || || ||||| | | || Sbjct 6094 TATCAGCGGTAACGTGAACGCGAACTCCGGGACGCTCAACAACGTCACGATTAATAAGAA 6035 Query 18447 CTGT 18450 |||| Sbjct 6034 CTGT 6031 >seq1137 Length=12692 Score = 96.9 bits (106), Expect = 1e-15 Identities = 153/213 (72%), Gaps = 11/213 (5%) Strand=Plus/Minus Query 47322 ATATTATCTGTGGCTAGATAGTAAATATAATGTG--AGACGTTGTGACGTTTTAGTTCAG 47379 || ||||| || || ||||| ||||| ||||||| | ||| |||| |||||| ||| | Sbjct 6208 ATGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACG--GTGATGTTTTAATTCTG 6151 Query 47380 AATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGG 47439 |||||||| | ||| | ||||||| |||||| || || || | || ||||| Sbjct 6150 AATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAA 6091 Query 47440 CAACCTGAGCCATTGG--TAA-AACCTTCCATGTGA--TACGAGGGCGCGTAGTTTGCAT 47494 | |||||| |||| | ||| ||||| | ||| | | ||| ||||||| |||| Sbjct 6090 CGACCTGATCCATCAGGATAATAACCT--CTTGTTAGTTGTGAGACTGCGTAGTGTGCAC 6033 Query 47495 TATCGTTTTTATCGTTTCAATCTGGTCTGACCT 47527 |||| ||||| | |||||||||||||| ||| Sbjct 6032 GATCGGTTTTACCACTTCAATCTGGTCTGTCCT 6000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155077146177408