Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq77 96.9 2e-15 >seq77 Length=169284 Score = 96.9 bits (106), Expect = 2e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 97057 TGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCA 97116 || || || |||||||||||||| ||||| || |||||||| || |||| |||| | Sbjct 43608 TGGTTTACGTAAATGTGAGCATCGCCTAACGTATGAATAAAGTCGCCAGCTCGTAAACCG 43549 Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 || ||||| || ||||| | || || |||||||| || || |||||||| || || || Sbjct 43548 GTAACATGAGCAATCATGCGGGTCAACAGAGAATAACTTGCTATGTTAAATGGTACACCA 43489 Query 97177 AGTCCC 97182 |||||| Sbjct 43488 AGTCCC 43483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346766434956920