Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_002185.1
Length=35466
Score E
Sequences producing significant alignments: (Bits) Value
seq729 100 6e-17
>seq729
Length=25020
Score = 100 bits (110), Expect = 6e-17
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 5472 GCGGTTAACCGTAACTTTAAGGATGCTAATGGTGAGCGTGAAGCAGACTTTATCAATTGC 5531
|| || || ||||| |||| | || | || | || || || || |||||||||||
Sbjct 1232 GCTGTGAATCGTAATTTTACGAATCAAAGCGGGAATCGCGAGGCGGATTTTATCAATTGT 1173
Query 5532 GTTATCTGGCGCCAGCAAGCTGAAAATTTGGCTAATTGGGCTAAAAAAGGCGCATTAATT 5591
|| || ||||| | ||| |||| ||| ||||||| || ||||| | | |
Sbjct 1172 GTAATTTGGCGGAAATCAGCAGAAACTTTAGCTAATTATGCGCGCAAAGGAACTCTTTTA 1113
Query 5592 GGAATCACTGGACGTATTCAGACTCGTAGCTATGAAAACCAACAGGGTCAACGAGTGTAT 5651
|| | ||||| ||||| || || | | |||||||| || || || ||||| || |||
Sbjct 1112 GGTGTGACTGGCCGTATCCAAACAAGAAATTATGAAAATCAGCAAGGGCAACGTGTCTAT 1053
Query 5652 GTGACAGAGGTAGTCGCTGAGAATTTCCAA 5681
|||||||| || || |||||||||||||||
Sbjct 1052 GTGACAGAAGTTGTTGCTGAGAATTTCCAA 1023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113364004926816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |