Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq223 87.8 1e-12
>seq223
Length=82600
Score = 87.8 bits (96), Expect = 1e-12
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
|| |||| |||||||| |||| |||||||||||||| || | |||||||| || ||
Sbjct 41778 GTCGTTTACCGGCGAAAATCAGGCGCTGTTGGTCGGGTGGTATCCCCTCCTTATCTTGAA 41837
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
|||| ||| || | | | | ||| ||| || |||| ||| || || ||||
Sbjct 41838 TTTTCGTCTTTACGTTCTCGATCGTATCCGACGGCTCGACTTCCAGGGTGATTGTTTTGC 41897
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| || ||||| |||||||||||||||||
Sbjct 41898 CAGTTAGAGTTTTCACAAAGATTTGCAT 41925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395055188947276
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |